RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SOX12O15370 315 aa10.22□□□□□ -0.77
PTPRF-210ENST00000463041 TRIM37O94972 964 aa10.22□□□□□ -0.77
PTPRF-210ENST00000463041 TMF1P82094 1093 aa10.22□□□□□ -0.77
PTPRF-210ENST00000463041 CDCA7Q9BWT1 371 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-210ENST00000463041 CARD10Q9BWT7 1032 aa10.22□□□□□ -0.77
PTPRF-210ENST00000463041 WDR17Q8IZU2 1322 aa10.22□□□□□ -0.77
PTPRF-210ENST00000463041 NINLQ9Y2I6 1382 aa10.22□□□□□ -0.77
PTPRF-210ENST00000463041 CD163L1Q9NR16 1453 aa10.22□□□□□ -0.77
PTPRF-210ENST00000463041 MON2Q7Z3U7 1717 aa10.21□□□□□ -0.77
PTPRF-210ENST00000463041 RGPD5Q99666 1765 aa10.21□□□□□ -0.77
PTPRF-210ENST00000463041 EN1Q05925 392 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-210ENST00000463041 CDCA8Q53HL2 280 aa10.21□□□□□ -0.77
PTPRF-210ENST00000463041 NME9Q86XW9 330 aa10.21□□□□□ -0.77
PTPRF-210ENST00000463041 EDC4Q6P2E9 1401 aaKnown RBP10.21□□□□□ -0.78
PTPRF-210ENST00000463041 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.78
PTPRF-210ENST00000463041 APBA3O96018 575 aa10.2□□□□□ -0.78
PTPRF-210ENST00000463041 CSB-PGBD3P0DP91 1061 aa10.2□□□□□ -0.78
PTPRF-210ENST00000463041 DDB1Q16531 1140 aa10.2□□□□□ -0.78
PTPRF-210ENST00000463041 KAT6BQ8WYB5 2073 aa10.19□□□□□ -0.78
PTPRF-210ENST00000463041 A0A1W2PP64 1363 aa10.19□□□□□ -0.78
PTPRF-210ENST00000463041 EXOC5O00471 708 aa10.19□□□□□ -0.78
PTPRF-210ENST00000463041 CAMKK2Q96RR4 588 aa10.19□□□□□ -0.78
PTPRF-210ENST00000463041 DISP2A7MBM2 1401 aa10.18□□□□□ -0.78
PTPRF-210ENST00000463041 USP47Q96K76 1375 aa10.18□□□□□ -0.78
PTPRF-210ENST00000463041 EZH2Q15910 746 aaKnown RBP10.18□□□□□ -0.78
PTPRF-210ENST00000463041 COG3Q96JB2 828 aa10.18□□□□□ -0.78
PTPRF-210ENST00000463041 PARP4Q9UKK3 1724 aaKnown RBP10.18□□□□□ -0.78
PTPRF-210ENST00000463041 NFAT5O94916 1531 aa10.17□□□□□ -0.78
PTPRF-210ENST00000463041 CCDC7Q96M83 1385 aa10.17□□□□□ -0.78
PTPRF-210ENST00000463041 IP6K1Q92551 441 aa10.17□□□□□ -0.78
PTPRF-210ENST00000463041 USP54Q70EL1 1684 aa10.17□□□□□ -0.78
PTPRF-210ENST00000463041 ABCC6O95255 1503 aa10.17□□□□□ -0.78
PTPRF-210ENST00000463041 ANKRD36BQ8N2N9 1353 aa10.16□□□□□ -0.78
PTPRF-210ENST00000463041 PARD3Q8TEW0 1356 aa10.16□□□□□ -0.78
PTPRF-210ENST00000463041 NLRP2Q9NX02 1062 aa10.16□□□□□ -0.78
PTPRF-210ENST00000463041 ERBB3P21860 1342 aa10.15□□□□□ -0.78
PTPRF-210ENST00000463041 SBF2Q86WG5 1849 aa10.15□□□□□ -0.78
PTPRF-210ENST00000463041 FYB1O15117 783 aa10.15□□□□□ -0.78
PTPRF-210ENST00000463041 PLSCR1O15162 318 aa10.15□□□□□ -0.78
PTPRF-210ENST00000463041 MARCH10Q8NA82 808 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-210ENST00000463041 CCER1Q8TC90 406 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-210ENST00000463041 ANKRD24Q8TF21 1146 aa10.15□□□□□ -0.78
PTPRF-210ENST00000463041 BCL11BQ9C0K0 894 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-210ENST00000463041 TNS1Q9HBL0 1735 aaKnown RBP10.15□□□□□ -0.78
PTPRF-210ENST00000463041 OVOS2A0A0G2JMS6 1433 aa10.15□□□□□ -0.79
PTPRF-210ENST00000463041 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.79
PTPRF-210ENST00000463041 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.79
PTPRF-210ENST00000463041 LTN1O94822 1766 aa10.14□□□□□ -0.79
PTPRF-210ENST00000463041 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
PTPRF-210ENST00000463041 BCL9O00512 1426 aa10.14□□□□□ -0.79
PTPRF-210ENST00000463041 PSDA5PKW4 1024 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-210ENST00000463041 IL2RBP14784 551 aa10.13□□□□□ -0.79
PTPRF-210ENST00000463041 AMPHP49418 695 aa10.13□□□□□ -0.79
PTPRF-210ENST00000463041 R3HDM1Q15032 1099 aaKnown RBP10.13□□□□□ -0.79
PTPRF-210ENST00000463041 PEAK1Q9H792 1746 aa10.12□□□□□ -0.79
PTPRF-210ENST00000463041 WNK3Q9BYP7 1800 aa10.12□□□□□ -0.79
PTPRF-210ENST00000463041 MAP3K19Q56UN5 1328 aa10.11□□□□□ -0.79
PTPRF-210ENST00000463041 FBLN1P23142 703 aa10.11□□□□□ -0.79
PTPRF-210ENST00000463041 HOXC9P31274 260 aa10.11□□□□□ -0.79
PTPRF-210ENST00000463041 EIF4G2P78344 907 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRF-210ENST00000463041 LTV1Q96GA3 475 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-210ENST00000463041 CARD14Q9BXL6 1004 aa10.11□□□□□ -0.79
PTPRF-210ENST00000463041 GGNBP2Q9H3C7 697 aa10.11□□□□□ -0.79
PTPRF-210ENST00000463041 LRRC37A3O60309 1634 aa10.11□□□□□ -0.79
PTPRF-210ENST00000463041 PTF1AQ7RTS3 328 aa10.09□□□□□ -0.79
PTPRF-210ENST00000463041 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
PTPRF-210ENST00000463041 PROM2Q8N271 834 aa10.08□□□□□ -0.8
PTPRF-210ENST00000463041 TNS2Q63HR2 1409 aa10.07□□□□□ -0.8
PTPRF-210ENST00000463041 RREB1Q92766 1687 aa10.07□□□□□ -0.8
PTPRF-210ENST00000463041 FAM208AQ9UK61 1670 aaKnown RBP10.07□□□□□ -0.8
PTPRF-210ENST00000463041 RTL1A6NKG5 1358 aa10.07□□□□□ -0.8
PTPRF-210ENST00000463041 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
PTPRF-210ENST00000463041 KCNQ2O43526 872 aa10.07□□□□□ -0.8
PTPRF-210ENST00000463041 HSPA5P11021 654 aaKnown RBP10.07□□□□□ -0.8
PTPRF-210ENST00000463041 DDX54Q8TDD1 881 aaKnown RBP10.07□□□□□ -0.8
PTPRF-210ENST00000463041 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
PTPRF-210ENST00000463041 RGPD3A6NKT7 1758 aaPredicted RBP10.06□□□□□ -0.8
PTPRF-210ENST00000463041 RGPD4Q7Z3J3 1758 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 MAP2P11137 1827 aaKnown RBP10.06□□□□□ -0.8
PTPRF-210ENST00000463041 TXNRD1Q16881 649 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 HSP90AB2PQ58FF8 381 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
PTPRF-210ENST00000463041 ACSBG1Q96GR2 724 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 POLR3GLQ9BT43 218 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 LRP5O75197 1615 aa10.06□□□□□ -0.8
PTPRF-210ENST00000463041 KIF20BQ96Q89 1820 aa10.05□□□□□ -0.8
PTPRF-210ENST00000463041 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
PTPRF-210ENST00000463041 INSRP06213 1382 aa10.05□□□□□ -0.8
PTPRF-210ENST00000463041 RGPD2P0DJD1 1756 aa10.05□□□□□ -0.8
PTPRF-210ENST00000463041 NSD3Q9BZ95 1437 aa10.05□□□□□ -0.8
PTPRF-210ENST00000463041 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
PTPRF-210ENST00000463041 RAPGEF4Q8WZA2 1011 aa10.04□□□□□ -0.8
PTPRF-210ENST00000463041 PANK3Q9H999 370 aa10.04□□□□□ -0.8
PTPRF-210ENST00000463041 SPON1Q9HCB6 807 aa10.04□□□□□ -0.8
PTPRF-210ENST00000463041 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
PTPRF-210ENST00000463041 FLT4P35916 1363 aa10.03□□□□□ -0.8
PTPRF-210ENST00000463041 MYOM1P52179 1685 aa10.03□□□□□ -0.8
PTPRF-210ENST00000463041 STK32BQ9NY57 414 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms