RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
SMC4-204ENST00000462787 SPATA32Q96LK8 384 aa18.77■□□□□ 0.6
SMC4-204ENST00000462787 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
SMC4-204ENST00000462787 USP8P40818 1118 aa18.77■□□□□ 0.6
SMC4-204ENST00000462787 KIF18AQ8NI77 898 aa18.77■□□□□ 0.6
SMC4-204ENST00000462787 FMNL2Q96PY5 1086 aa18.77■□□□□ 0.6
SMC4-204ENST00000462787 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
SMC4-204ENST00000462787 CCDC30Q5VVM6 783 aa18.77■□□□□ 0.59
SMC4-204ENST00000462787 CBFA2T2O43439 604 aa18.76■□□□□ 0.59
SMC4-204ENST00000462787 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
SMC4-204ENST00000462787 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
SMC4-204ENST00000462787 SMARCE1Q969G3 411 aa18.76■□□□□ 0.59
SMC4-204ENST00000462787 DEF6Q9H4E7 631 aa18.76■□□□□ 0.59
SMC4-204ENST00000462787 CFAP45Q9UL16 551 aa18.75■□□□□ 0.59
SMC4-204ENST00000462787 TROQ12816 1431 aaPredicted RBP18.75■□□□□ 0.59
SMC4-204ENST00000462787 ABCC11Q96J66 1382 aa18.75■□□□□ 0.59
SMC4-204ENST00000462787 NEMFO60524 1076 aa18.75■□□□□ 0.59
SMC4-204ENST00000462787 SSH1Q8WYL5 1049 aa18.75■□□□□ 0.59
SMC4-204ENST00000462787 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
SMC4-204ENST00000462787 CEP89Q96ST8 783 aa18.75■□□□□ 0.59
SMC4-204ENST00000462787 TNNT1P13805 278 aa18.75■□□□□ 0.59
SMC4-204ENST00000462787 TMPOP42166 694 aaKnown RBP18.75■□□□□ 0.59
SMC4-204ENST00000462787 FILIP1Q7Z7B0 1213 aa18.75■□□□□ 0.59
SMC4-204ENST00000462787 SMAP1Q8IYB5 467 aaPredicted RBP18.75■□□□□ 0.59
SMC4-204ENST00000462787 CCDC94Q9BW85 323 aaPredicted RBP18.75■□□□□ 0.59
SMC4-204ENST00000462787 STK38Q15208 465 aa18.74■□□□□ 0.59
SMC4-204ENST00000462787 CAGE1Q8TC20 777 aa18.74■□□□□ 0.59
SMC4-204ENST00000462787 ADCY5O95622 1261 aa18.74■□□□□ 0.59
SMC4-204ENST00000462787 SERPINC1P01008 464 aa18.74■□□□□ 0.59
SMC4-204ENST00000462787 C1orf141Q5JVX7 400 aa18.74■□□□□ 0.59
SMC4-204ENST00000462787 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
SMC4-204ENST00000462787 FILIP1LQ4L180 1135 aa18.73■□□□□ 0.59
SMC4-204ENST00000462787 PDRG1Q9NUG6 133 aa18.73■□□□□ 0.59
SMC4-204ENST00000462787 HDAC1Q13547 482 aaPredicted RBP18.73■□□□□ 0.59
SMC4-204ENST00000462787 RALYLQ86SE5 291 aaKnown RBP18.73■□□□□ 0.59
SMC4-204ENST00000462787 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
SMC4-204ENST00000462787 CSB-PGBD3P0DP91 1061 aa18.73■□□□□ 0.59
SMC4-204ENST00000462787 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
SMC4-204ENST00000462787 TBC1D9Q6ZT07 1266 aa18.72■□□□□ 0.59
SMC4-204ENST00000462787 TERF1P54274 439 aa18.72■□□□□ 0.59
SMC4-204ENST00000462787 AXDND1Q5T1B0 1012 aaPredicted RBP18.72■□□□□ 0.59
SMC4-204ENST00000462787 SMC5Q8IY18 1101 aa18.72■□□□□ 0.59
SMC4-204ENST00000462787 JMYQ8N9B5 988 aa18.72■□□□□ 0.59
SMC4-204ENST00000462787 DHX16O60231 1041 aaKnown RBP18.71■□□□□ 0.59
SMC4-204ENST00000462787 PAXBP1Q9Y5B6 917 aa18.71■□□□□ 0.59
SMC4-204ENST00000462787 FCHSD2O94868 740 aa18.71■□□□□ 0.59
SMC4-204ENST00000462787 NOLC1Q14978 699 aaKnown RBP eCLIP18.71■□□□□ 0.594e-16■■■■■ 30.2
SMC4-204ENST00000462787 RAB3GAP1Q15042 981 aa18.71■□□□□ 0.59
SMC4-204ENST00000462787 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
SMC4-204ENST00000462787 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
SMC4-204ENST00000462787 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
SMC4-204ENST00000462787 ME1P48163 572 aa18.7■□□□□ 0.58
SMC4-204ENST00000462787 NFXL1Q6ZNB6 911 aa18.7■□□□□ 0.58
SMC4-204ENST00000462787 CLSTN1O94985 981 aa18.7■□□□□ 0.58
SMC4-204ENST00000462787 CEBPZQ03701 1054 aaKnown RBP18.7■□□□□ 0.58
SMC4-204ENST00000462787 SCAND2PQ9GZW5 306 aaPredicted RBP18.7■□□□□ 0.58
SMC4-204ENST00000462787 SMTNL1A8MU46 457 aa18.7■□□□□ 0.58
SMC4-204ENST00000462787 TIGD1Q96MW7 591 aa18.7■□□□□ 0.58
SMC4-204ENST00000462787 RBM27Q9P2N5 1060 aaKnown RBP18.69■□□□□ 0.58
SMC4-204ENST00000462787 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
SMC4-204ENST00000462787 KIAA0754O94854 1291 aa18.69■□□□□ 0.58
SMC4-204ENST00000462787 TRIM27P14373 513 aa18.69■□□□□ 0.58
SMC4-204ENST00000462787 BLOC1S2Q6QNY1 142 aa18.68■□□□□ 0.58
SMC4-204ENST00000462787 DACH1Q9UI36 760 aa18.68■□□□□ 0.58
SMC4-204ENST00000462787 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
SMC4-204ENST00000462787 CLIP2Q9UDT6 1046 aa18.68■□□□□ 0.58
SMC4-204ENST00000462787 ABCC5O15440 1437 aa18.68■□□□□ 0.58
SMC4-204ENST00000462787 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
SMC4-204ENST00000462787 PIP4K2AP48426 406 aaPredicted RBP18.68■□□□□ 0.58
SMC4-204ENST00000462787 C16orf45Q96MC5 204 aaPredicted RBP18.68■□□□□ 0.58
SMC4-204ENST00000462787 JAKMIP1Q96N16 626 aaKnown RBP18.68■□□□□ 0.58
SMC4-204ENST00000462787 NSD3Q9BZ95 1437 aa18.68■□□□□ 0.58
SMC4-204ENST00000462787 GBP3Q9H0R5 595 aa18.68■□□□□ 0.58
SMC4-204ENST00000462787 EPRSP07814 1512 aaKnown RBP18.68■□□□□ 0.58
SMC4-204ENST00000462787 SFPQP23246 707 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMC4-204ENST00000462787 RBM25P49756 843 aaKnown RBP18.67■□□□□ 0.58
SMC4-204ENST00000462787 KRT222Q8N1A0 295 aa18.67■□□□□ 0.58
SMC4-204ENST00000462787 CCDC191Q8NCU4 936 aa18.67■□□□□ 0.58
SMC4-204ENST00000462787 BMS1Q14692 1282 aaKnown RBP18.67■□□□□ 0.58
SMC4-204ENST00000462787 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
SMC4-204ENST00000462787 SH2B1Q9NRF2 756 aaPredicted RBP18.67■□□□□ 0.58
SMC4-204ENST00000462787 NUTM2FA1L443 756 aa18.66■□□□□ 0.58
SMC4-204ENST00000462787 TTLL5Q6EMB2 1281 aa18.66■□□□□ 0.58
SMC4-204ENST00000462787 PPFIBP1Q86W92 1011 aa18.66■□□□□ 0.58
SMC4-204ENST00000462787 PCDHB15Q9Y5E8 787 aa18.66■□□□□ 0.58
SMC4-204ENST00000462787 NUCB1Q02818 461 aa18.66■□□□□ 0.58
SMC4-204ENST00000462787 NOL10Q9BSC4 688 aaKnown RBP18.66■□□□□ 0.58
SMC4-204ENST00000462787 MARCH6O60337 910 aa18.65■□□□□ 0.58
SMC4-204ENST00000462787 ZSCAN12O43309 604 aa18.65■□□□□ 0.58
SMC4-204ENST00000462787 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
SMC4-204ENST00000462787 ANO10Q9NW15 660 aa18.65■□□□□ 0.58
SMC4-204ENST00000462787 PRG4Q92954 1404 aaPredicted RBP18.65■□□□□ 0.58
SMC4-204ENST00000462787 UBE2HP62256 183 aa18.65■□□□□ 0.58
SMC4-204ENST00000462787 CAMK4Q16566 473 aa18.65■□□□□ 0.58
SMC4-204ENST00000462787 DDX19AQ9NUU7 478 aaKnown RBP18.65■□□□□ 0.58
SMC4-204ENST00000462787 CAVIN2O95810 425 aa18.64■□□□□ 0.58
SMC4-204ENST00000462787 NAP1L1P55209 391 aaKnown RBP18.64■□□□□ 0.58
SMC4-204ENST00000462787 ERICH2A1L162 156 aa18.64■□□□□ 0.57
SMC4-204ENST00000462787 CTAGE5O15320 804 aa18.64■□□□□ 0.57
SMC4-204ENST00000462787 GSDMDP57764 484 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms