RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 KCNH5Q8NCM2 988 aa25.92■■□□□ 1.74
PDLIM4-204ENST00000462597 TESK2Q96S53 571 aa25.92■■□□□ 1.74
PDLIM4-204ENST00000462597 LRRC37A3O60309 1634 aa25.92■■□□□ 1.74
PDLIM4-204ENST00000462597 ZEB1P37275 1124 aaPredicted RBP25.91■■□□□ 1.74
PDLIM4-204ENST00000462597 NME9Q86XW9 330 aa25.91■■□□□ 1.74
PDLIM4-204ENST00000462597 EN1Q05925 392 aaPredicted RBP25.9■■□□□ 1.74
PDLIM4-204ENST00000462597 PDE3BQ13370 1112 aa25.9■■□□□ 1.74
PDLIM4-204ENST00000462597 THRAP3Q9Y2W1 955 aaKnown RBP25.9■■□□□ 1.74
PDLIM4-204ENST00000462597 A0A1W2PP64 1363 aa25.9■■□□□ 1.74
PDLIM4-204ENST00000462597 TRIM37O94972 964 aa25.89■■□□□ 1.74
PDLIM4-204ENST00000462597 HDGFL2Q7Z4V5 671 aaPredicted RBP25.89■■□□□ 1.74
PDLIM4-204ENST00000462597 LTN1O94822 1766 aa25.88■■□□□ 1.73
PDLIM4-204ENST00000462597 EIF4G2P78344 907 aaKnown RBP eCLIP25.88■■□□□ 1.73
PDLIM4-204ENST00000462597 FAM196AQ6ZSG2 479 aa25.88■■□□□ 1.73
PDLIM4-204ENST00000462597 TOM1L2Q6ZVM7 507 aa25.88■■□□□ 1.73
PDLIM4-204ENST00000462597 EDC4Q6P2E9 1401 aaKnown RBP25.88■■□□□ 1.73
PDLIM4-204ENST00000462597 WDR17Q8IZU2 1322 aa25.88■■□□□ 1.73
PDLIM4-204ENST00000462597 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
PDLIM4-204ENST00000462597 DISP2A7MBM2 1401 aa25.87■■□□□ 1.73
PDLIM4-204ENST00000462597 HSPA5P11021 654 aaKnown RBP25.85■■□□□ 1.73
PDLIM4-204ENST00000462597 PEAK1Q9H792 1746 aa25.85■■□□□ 1.73
PDLIM4-204ENST00000462597 TERF2IPQ9NYB0 399 aa25.84■■□□□ 1.73
PDLIM4-204ENST00000462597 ABCC6O95255 1503 aa25.83■■□□□ 1.73
PDLIM4-204ENST00000462597 PUS7Q96PZ0 661 aaKnown RBP25.83■■□□□ 1.73
PDLIM4-204ENST00000462597 PSDA5PKW4 1024 aaPredicted RBP25.82■■□□□ 1.72
PDLIM4-204ENST00000462597 CSB-PGBD3P0DP91 1061 aa25.82■■□□□ 1.72
PDLIM4-204ENST00000462597 EZH2Q15910 746 aaKnown RBP25.82■■□□□ 1.72
PDLIM4-204ENST00000462597 OVOS2A0A0J9YW53 1432 aa25.81■■□□□ 1.72
PDLIM4-204ENST00000462597 OVOS2Q6IE36 1432 aa25.81■■□□□ 1.72
PDLIM4-204ENST00000462597 APBA3O96018 575 aa25.8■■□□□ 1.72
PDLIM4-204ENST00000462597 RREB1Q92766 1687 aa25.79■■□□□ 1.72
PDLIM4-204ENST00000462597 NINLQ9Y2I6 1382 aa25.79■■□□□ 1.72
PDLIM4-204ENST00000462597 SBF2Q86WG5 1849 aa25.79■■□□□ 1.72
PDLIM4-204ENST00000462597 CAMKK2Q96RR4 588 aa25.78■■□□□ 1.72
PDLIM4-204ENST00000462597 OVOS2A0A0G2JMS6 1433 aa25.78■■□□□ 1.72
PDLIM4-204ENST00000462597 DDB1Q16531 1140 aa25.77■■□□□ 1.72
PDLIM4-204ENST00000462597 CARD10Q9BWT7 1032 aa25.77■■□□□ 1.72
PDLIM4-204ENST00000462597 NUP188Q5SRE5 1749 aa25.77■■□□□ 1.72
PDLIM4-204ENST00000462597 SLC24A1O60721 1099 aa25.75■■□□□ 1.71
PDLIM4-204ENST00000462597 TMF1P82094 1093 aa25.75■■□□□ 1.71
PDLIM4-204ENST00000462597 LRP5O75197 1615 aa25.74■■□□□ 1.71
PDLIM4-204ENST00000462597 ERBB3P21860 1342 aa25.73■■□□□ 1.71
PDLIM4-204ENST00000462597 R3HDM1Q15032 1099 aaKnown RBP25.73■■□□□ 1.71
PDLIM4-204ENST00000462597 ANKRD36BQ8N2N9 1353 aa25.72■■□□□ 1.71
PDLIM4-204ENST00000462597 CCDC7Q96M83 1385 aa25.71■■□□□ 1.71
PDLIM4-204ENST00000462597 MARCH10Q8NA82 808 aaPredicted RBP25.71■■□□□ 1.71
PDLIM4-204ENST00000462597 MYOM1P52179 1685 aa25.71■■□□□ 1.71
PDLIM4-204ENST00000462597 PARD3Q8TEW0 1356 aa25.7■■□□□ 1.71
PDLIM4-204ENST00000462597 CDCA7Q9BWT1 371 aaPredicted RBP25.7■■□□□ 1.7
PDLIM4-204ENST00000462597 NLRP2Q9NX02 1062 aa25.7■■□□□ 1.7
PDLIM4-204ENST00000462597 PTF1AQ7RTS3 328 aa25.69■■□□□ 1.7
PDLIM4-204ENST00000462597 ANKRD24Q8TF21 1146 aa25.69■■□□□ 1.7
PDLIM4-204ENST00000462597 TNS2Q63HR2 1409 aa25.68■■□□□ 1.7
PDLIM4-204ENST00000462597 FBLN1P23142 703 aa25.67■■□□□ 1.7
PDLIM4-204ENST00000462597 COG3Q96JB2 828 aa25.67■■□□□ 1.7
PDLIM4-204ENST00000462597 KIF20BQ96Q89 1820 aa25.67■■□□□ 1.7
PDLIM4-204ENST00000462597 C11orf95C9JLR9 678 aaPredicted RBP25.66■■□□□ 1.7
PDLIM4-204ENST00000462597 RGPD3A6NKT7 1758 aaPredicted RBP25.66■■□□□ 1.7
PDLIM4-204ENST00000462597 RGPD4Q7Z3J3 1758 aa25.66■■□□□ 1.7
PDLIM4-204ENST00000462597 FAM208AQ9UK61 1670 aaKnown RBP25.65■■□□□ 1.7
PDLIM4-204ENST00000462597 CDCA8Q53HL2 280 aa25.65■■□□□ 1.7
PDLIM4-204ENST00000462597 EXOC5O00471 708 aa25.64■■□□□ 1.7
PDLIM4-204ENST00000462597 MAP3K19Q56UN5 1328 aa25.63■■□□□ 1.69
PDLIM4-204ENST00000462597 IP6K1Q92551 441 aa25.63■■□□□ 1.69
PDLIM4-204ENST00000462597 LTV1Q96GA3 475 aaPredicted RBP25.63■■□□□ 1.69
PDLIM4-204ENST00000462597 RGPD2P0DJD1 1756 aa25.63■■□□□ 1.69
PDLIM4-204ENST00000462597 POLR3GLQ9BT43 218 aa25.62■■□□□ 1.69
PDLIM4-204ENST00000462597 GGNBP2Q9H3C7 697 aa25.62■■□□□ 1.69
PDLIM4-204ENST00000462597 BCL9O00512 1426 aa25.62■■□□□ 1.69
PDLIM4-204ENST00000462597 FYB1O15117 783 aa25.6■■□□□ 1.69
PDLIM4-204ENST00000462597 BCL11BQ9C0K0 894 aaPredicted RBP25.6■■□□□ 1.69
PDLIM4-204ENST00000462597 NHSQ6T4R5 1651 aa25.59■■□□□ 1.69
PDLIM4-204ENST00000462597 IL2RBP14784 551 aa25.59■■□□□ 1.69
PDLIM4-204ENST00000462597 HOXC9P31274 260 aa25.58■■□□□ 1.69
PDLIM4-204ENST00000462597 RRS1Q15050 365 aaKnown RBP25.57■■□□□ 1.68
PDLIM4-204ENST00000462597 AMPHP49418 695 aa25.56■■□□□ 1.68
PDLIM4-204ENST00000462597 NSD3Q9BZ95 1437 aa25.55■■□□□ 1.68
PDLIM4-204ENST00000462597 PLSCR1O15162 318 aa25.55■■□□□ 1.68
PDLIM4-204ENST00000462597 KCNQ2O43526 872 aa25.55■■□□□ 1.68
PDLIM4-204ENST00000462597 CARD14Q9BXL6 1004 aa25.55■■□□□ 1.68
PDLIM4-204ENST00000462597 KIF7Q2M1P5 1343 aa25.55■■□□□ 1.68
PDLIM4-204ENST00000462597 NBPF14Q5TI25 921 aa25.54■■□□□ 1.68
PDLIM4-204ENST00000462597 ACSBG1Q96GR2 724 aa25.54■■□□□ 1.68
PDLIM4-204ENST00000462597 RTL1A6NKG5 1358 aa25.53■■□□□ 1.68
PDLIM4-204ENST00000462597 BTAF1O14981 1849 aa25.51■■□□□ 1.67
PDLIM4-204ENST00000462597 ANO8Q9HCE9 1232 aaPredicted RBP25.51■■□□□ 1.67
PDLIM4-204ENST00000462597 SHANK3Q9BYB0 1731 aa25.51■■□□□ 1.67
PDLIM4-204ENST00000462597 PROM2Q8N271 834 aa25.5■■□□□ 1.67
PDLIM4-204ENST00000462597 WASHC2AQ641Q2 1341 aa25.49■■□□□ 1.67
PDLIM4-204ENST00000462597 MEGF6O75095 1541 aa25.48■■□□□ 1.67
PDLIM4-204ENST00000462597 KAT6BQ8WYB5 2073 aa25.46■■□□□ 1.67
PDLIM4-204ENST00000462597 USHBP1Q8N6Y0 703 aa25.46■■□□□ 1.67
PDLIM4-204ENST00000462597 DDX54Q8TDD1 881 aaKnown RBP25.46■■□□□ 1.67
PDLIM4-204ENST00000462597 CASZ1Q86V15 1759 aa25.46■■□□□ 1.67
PDLIM4-204ENST00000462597 DOT1LQ8TEK3 1739 aa25.46■■□□□ 1.67
PDLIM4-204ENST00000462597 TXNRD1Q16881 649 aa25.45■■□□□ 1.66
PDLIM4-204ENST00000462597 NBPF6Q5VWK0 638 aa25.44■■□□□ 1.66
PDLIM4-204ENST00000462597 NBPF4Q96M43 638 aa25.44■■□□□ 1.66
PDLIM4-204ENST00000462597 SMG6Q86US8 1419 aaKnown RBP25.44■■□□□ 1.66
PDLIM4-204ENST00000462597 ANKRD26Q9UPS8 1709 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms