RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 PRAG1Q86YV5 1406 aa7.64□□□□□ -1.19
PDCD4-204ENST00000462577 TK2O00142 265 aa7.64□□□□□ -1.19
PDCD4-204ENST00000462577 COL9A1P20849 921 aa7.64□□□□□ -1.19
PDCD4-204ENST00000462577 PIK3R4Q99570 1358 aa7.63□□□□□ -1.19
PDCD4-204ENST00000462577 RPGRIP1LQ68CZ1 1315 aa7.63□□□□□ -1.19
PDCD4-204ENST00000462577 LTKP29376 864 aa7.63□□□□□ -1.19
PDCD4-204ENST00000462577 HDGFP51858 240 aaKnown RBP7.63□□□□□ -1.19
PDCD4-204ENST00000462577 C6orf132Q5T0Z8 1188 aa7.63□□□□□ -1.19
PDCD4-204ENST00000462577 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.63□□□□□ -1.19
PDCD4-204ENST00000462577 ZBED2Q9BTP6 218 aa7.63□□□□□ -1.19
PDCD4-204ENST00000462577 VPS9D1Q9Y2B5 631 aa7.63□□□□□ -1.19
PDCD4-204ENST00000462577 EID1Q9Y6B2 187 aa7.63□□□□□ -1.19
PDCD4-204ENST00000462577 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.63□□□□□ -1.19
PDCD4-204ENST00000462577 DHX57Q6P158 1386 aaKnown RBP7.62□□□□□ -1.19
PDCD4-204ENST00000462577 HRO43593 1189 aa7.62□□□□□ -1.19
PDCD4-204ENST00000462577 PRIM1P49642 420 aaKnown RBP7.62□□□□□ -1.19
PDCD4-204ENST00000462577 TXNDC2Q86VQ3 553 aa7.62□□□□□ -1.19
PDCD4-204ENST00000462577 RNF166Q96A37 237 aaPredicted RBP7.62□□□□□ -1.19
PDCD4-204ENST00000462577 ASXL1Q8IXJ9 1541 aa7.62□□□□□ -1.19
PDCD4-204ENST00000462577 PIK3C2GO75747 1445 aa7.61□□□□□ -1.19
PDCD4-204ENST00000462577 OSBPP22059 807 aa7.61□□□□□ -1.19
PDCD4-204ENST00000462577 EN1Q05925 392 aaPredicted RBP7.61□□□□□ -1.19
PDCD4-204ENST00000462577 TSR1Q2NL82 804 aaKnown RBP7.61□□□□□ -1.19
PDCD4-204ENST00000462577 SLC4A5Q9BY07 1137 aa7.61□□□□□ -1.19
PDCD4-204ENST00000462577 LRRC7Q96NW7 1537 aa7.61□□□□□ -1.19
PDCD4-204ENST00000462577 RGPD8O14715 1765 aaPredicted RBP7.61□□□□□ -1.19
PDCD4-204ENST00000462577 PPP1R3GB7ZBB8 358 aa7.6□□□□□ -1.19
PDCD4-204ENST00000462577 MAP3K7O43318 606 aa7.6□□□□□ -1.19
PDCD4-204ENST00000462577 MLLT3P42568 568 aaPredicted RBP7.6□□□□□ -1.19
PDCD4-204ENST00000462577 PROX2Q3B8N5 592 aa7.6□□□□□ -1.19
PDCD4-204ENST00000462577 ITSN1Q15811 1721 aa7.59□□□□□ -1.19
PDCD4-204ENST00000462577 FMN2Q9NZ56 1722 aa7.59□□□□□ -1.19
PDCD4-204ENST00000462577 VSIG10Q8N0Z9 540 aa7.59□□□□□ -1.19
PDCD4-204ENST00000462577 ADGRB1O14514 1584 aa7.59□□□□□ -1.2
PDCD4-204ENST00000462577 ZNF335Q9H4Z2 1342 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-204ENST00000462577 SEMA3EO15041 775 aa7.58□□□□□ -1.2
PDCD4-204ENST00000462577 STAC3Q96MF2 364 aa7.58□□□□□ -1.2
PDCD4-204ENST00000462577 TBX22Q9Y458 520 aa7.58□□□□□ -1.2
PDCD4-204ENST00000462577 PTCH1Q13635 1447 aa7.58□□□□□ -1.2
PDCD4-204ENST00000462577 NCOA3Q9Y6Q9 1424 aa7.58□□□□□ -1.2
PDCD4-204ENST00000462577 ADGRB2O60241 1585 aa7.58□□□□□ -1.2
PDCD4-204ENST00000462577 DLC1Q96QB1 1528 aa7.57□□□□□ -1.2
PDCD4-204ENST00000462577 QRICH2Q9H0J4 1663 aa7.57□□□□□ -1.2
PDCD4-204ENST00000462577 NHSL1Q5SYE7 1610 aa7.57□□□□□ -1.2
PDCD4-204ENST00000462577 BHMG1C9JSJ3 638 aaPredicted RBP7.57□□□□□ -1.2
PDCD4-204ENST00000462577 PPP1R15AO75807 674 aaPredicted RBP7.57□□□□□ -1.2
PDCD4-204ENST00000462577 ZNF326Q5BKZ1 582 aaKnown RBP7.57□□□□□ -1.2
PDCD4-204ENST00000462577 TECPR2O15040 1411 aa7.57□□□□□ -1.2
PDCD4-204ENST00000462577 PTPRUQ92729 1446 aa7.57□□□□□ -1.2
PDCD4-204ENST00000462577 CDC42BPGQ6DT37 1551 aa7.57□□□□□ -1.2
PDCD4-204ENST00000462577 CERKQ8TCT0 537 aa7.56□□□□□ -1.2
PDCD4-204ENST00000462577 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
PDCD4-204ENST00000462577 KCNA6P17658 529 aa7.55□□□□□ -1.2
PDCD4-204ENST00000462577 CDHR5Q9HBB8 845 aa7.55□□□□□ -1.2
PDCD4-204ENST00000462577 CLSPNQ9HAW4 1339 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 KIF1AQ12756 1690 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 TOPAZ1Q8N9V7 1692 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 DCCP43146 1447 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 SLC26A8Q96RN1 970 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 KIAA1468Q9P260 1216 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 RABGEF1Q9UJ41 708 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 METP08581 1390 aa7.54□□□□□ -1.2
PDCD4-204ENST00000462577 ADGRF5Q8IZF2 1346 aa7.53□□□□□ -1.2
PDCD4-204ENST00000462577 USP32Q8NFA0 1604 aa7.53□□□□□ -1.2
PDCD4-204ENST00000462577 PHLPP1O60346 1717 aa7.53□□□□□ -1.2
PDCD4-204ENST00000462577 TRIM6-TRIM34B2RNG4 842 aa7.53□□□□□ -1.2
PDCD4-204ENST00000462577 MRPL50Q8N5N7 158 aaKnown RBP7.53□□□□□ -1.2
PDCD4-204ENST00000462577 KCTD12Q96CX2 325 aaKnown RBP7.53□□□□□ -1.2
PDCD4-204ENST00000462577 YTHDC2Q9H6S0 1430 aaKnown RBP7.52□□□□□ -1.2
PDCD4-204ENST00000462577 MARF1Q9Y4F3 1742 aaKnown RBP7.52□□□□□ -1.2
PDCD4-204ENST00000462577 SHPRHQ149N8 1683 aa7.52□□□□□ -1.21
PDCD4-204ENST00000462577 LRPPRCP42704 1394 aaKnown RBP7.52□□□□□ -1.21
PDCD4-204ENST00000462577 NUTM2DQ5VT03 806 aaPredicted RBP7.52□□□□□ -1.21
PDCD4-204ENST00000462577 C14orf93Q9H972 538 aaKnown RBP7.52□□□□□ -1.21
PDCD4-204ENST00000462577 TSKSQ9UJT2 592 aa7.52□□□□□ -1.21
PDCD4-204ENST00000462577 AHDC1Q5TGY3 1603 aaPredicted RBP7.52□□□□□ -1.21
PDCD4-204ENST00000462577 FAM135BQ49AJ0 1406 aa7.52□□□□□ -1.21
PDCD4-204ENST00000462577 ADGRL3Q9HAR2 1447 aa7.52□□□□□ -1.21
PDCD4-204ENST00000462577 AKAP12Q02952 1782 aa7.51□□□□□ -1.21
PDCD4-204ENST00000462577 TMEM94Q12767 1356 aa7.51□□□□□ -1.21
PDCD4-204ENST00000462577 ABCC11Q96J66 1382 aa7.51□□□□□ -1.21
PDCD4-204ENST00000462577 ONECUT3O60422 494 aaPredicted RBP7.51□□□□□ -1.21
PDCD4-204ENST00000462577 RGL3Q3MIN7 710 aa7.51□□□□□ -1.21
PDCD4-204ENST00000462577 CDCA7LQ96GN5 454 aa7.51□□□□□ -1.21
PDCD4-204ENST00000462577 NBPF3Q9H094 633 aa7.51□□□□□ -1.21
PDCD4-204ENST00000462577 NPDC1Q9NQX5 325 aaPredicted RBP7.51□□□□□ -1.21
PDCD4-204ENST00000462577 RALGAPBQ86X10 1494 aa7.5□□□□□ -1.21
PDCD4-204ENST00000462577 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
PDCD4-204ENST00000462577 TESPA1A2RU30 521 aaPredicted RBP7.5□□□□□ -1.21
PDCD4-204ENST00000462577 GOLGA8CPA6NN73 597 aa7.5□□□□□ -1.21
PDCD4-204ENST00000462577 PRSS12P56730 875 aa7.5□□□□□ -1.21
PDCD4-204ENST00000462577 FBXO41Q8TF61 875 aa7.5□□□□□ -1.21
PDCD4-204ENST00000462577 BCANQ96GW7 911 aa7.5□□□□□ -1.21
PDCD4-204ENST00000462577 PCGF6Q9BYE7 350 aa7.5□□□□□ -1.21
PDCD4-204ENST00000462577 FAM198AQ9UFP1 575 aa7.5□□□□□ -1.21
PDCD4-204ENST00000462577 SEPT9Q9UHD8 586 aaPredicted RBP7.5□□□□□ -1.21
PDCD4-204ENST00000462577 MSH6P52701 1360 aa7.49□□□□□ -1.21
PDCD4-204ENST00000462577 ROBO2Q9HCK4 1378 aa7.49□□□□□ -1.21
PDCD4-204ENST00000462577 DCAF11Q8TEB1 546 aa7.49□□□□□ -1.21
PDCD4-204ENST00000462577 SIRT1Q96EB6 747 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms