RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
LRRC47-202ENST00000462356 AATKQ6ZMQ8 1374 aa18.51■□□□□ 0.55
LRRC47-202ENST00000462356 FYB1O15117 783 aa18.5■□□□□ 0.55
LRRC47-202ENST00000462356 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
LRRC47-202ENST00000462356 COG3Q96JB2 828 aa18.5■□□□□ 0.55
LRRC47-202ENST00000462356 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
LRRC47-202ENST00000462356 OVOS2A0A0J9YW53 1432 aa18.49■□□□□ 0.55
LRRC47-202ENST00000462356 OVOS2Q6IE36 1432 aa18.49■□□□□ 0.55
LRRC47-202ENST00000462356 USP54Q70EL1 1684 aa18.49■□□□□ 0.55
LRRC47-202ENST00000462356 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
LRRC47-202ENST00000462356 CSB-PGBD3P0DP91 1061 aa18.47■□□□□ 0.55
LRRC47-202ENST00000462356 FAM182BQ5T319 152 aa18.47■□□□□ 0.55
LRRC47-202ENST00000462356 LTN1O94822 1766 aa18.47■□□□□ 0.55
LRRC47-202ENST00000462356 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
LRRC47-202ENST00000462356 KRT27Q7Z3Y8 459 aa18.45■□□□□ 0.54
LRRC47-202ENST00000462356 PANK3Q9H999 370 aa18.45■□□□□ 0.54
LRRC47-202ENST00000462356 TCP11L2Q8N4U5 519 aa18.44■□□□□ 0.54
LRRC47-202ENST00000462356 KIF20BQ96Q89 1820 aa18.44■□□□□ 0.54
LRRC47-202ENST00000462356 CRB1P82279 1406 aa18.43■□□□□ 0.54
LRRC47-202ENST00000462356 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
LRRC47-202ENST00000462356 LTV1Q96GA3 475 aaPredicted RBP18.43■□□□□ 0.54
LRRC47-202ENST00000462356 KIF7Q2M1P5 1343 aa18.43■□□□□ 0.54
LRRC47-202ENST00000462356 WDR17Q8IZU2 1322 aa18.43■□□□□ 0.54
LRRC47-202ENST00000462356 MAP3K19Q56UN5 1328 aa18.42■□□□□ 0.54
LRRC47-202ENST00000462356 THSD7AQ9UPZ6 1657 aa18.41■□□□□ 0.54
LRRC47-202ENST00000462356 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
LRRC47-202ENST00000462356 ANKRD24Q8TF21 1146 aa18.4■□□□□ 0.54
LRRC47-202ENST00000462356 AMPHP49418 695 aa18.39■□□□□ 0.53
LRRC47-202ENST00000462356 IP6K1Q92551 441 aa18.39■□□□□ 0.53
LRRC47-202ENST00000462356 NLRP2Q9NX02 1062 aa18.39■□□□□ 0.53
LRRC47-202ENST00000462356 HOXC9P31274 260 aa18.38■□□□□ 0.53
LRRC47-202ENST00000462356 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
LRRC47-202ENST00000462356 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
LRRC47-202ENST00000462356 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
LRRC47-202ENST00000462356 CARD10Q9BWT7 1032 aa18.37■□□□□ 0.53
LRRC47-202ENST00000462356 ERBB3P21860 1342 aa18.37■□□□□ 0.53
LRRC47-202ENST00000462356 ABCC6O95255 1503 aa18.35■□□□□ 0.53
LRRC47-202ENST00000462356 PDE3BQ13370 1112 aa18.35■□□□□ 0.53
LRRC47-202ENST00000462356 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
LRRC47-202ENST00000462356 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
LRRC47-202ENST00000462356 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
LRRC47-202ENST00000462356 CCDC7Q96M83 1385 aa18.33■□□□□ 0.53
LRRC47-202ENST00000462356 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
LRRC47-202ENST00000462356 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
LRRC47-202ENST00000462356 PEAK1Q9H792 1746 aa18.32■□□□□ 0.52
LRRC47-202ENST00000462356 CNGB1Q14028 1251 aaPredicted RBP18.32■□□□□ 0.52
LRRC47-202ENST00000462356 DDB1Q16531 1140 aa18.32■□□□□ 0.52
LRRC47-202ENST00000462356 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
LRRC47-202ENST00000462356 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
LRRC47-202ENST00000462356 WNK3Q9BYP7 1800 aa18.31■□□□□ 0.52
LRRC47-202ENST00000462356 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
LRRC47-202ENST00000462356 PARP4Q9UKK3 1724 aaKnown RBP18.31■□□□□ 0.52
LRRC47-202ENST00000462356 USHBP1Q8N6Y0 703 aa18.3■□□□□ 0.52
LRRC47-202ENST00000462356 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
LRRC47-202ENST00000462356 MAP2P11137 1827 aaKnown RBP18.29■□□□□ 0.52
LRRC47-202ENST00000462356 TRIM37O94972 964 aa18.29■□□□□ 0.52
LRRC47-202ENST00000462356 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
LRRC47-202ENST00000462356 CCDC125Q86Z20 511 aa18.29■□□□□ 0.52
LRRC47-202ENST00000462356 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
LRRC47-202ENST00000462356 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
LRRC47-202ENST00000462356 FAM196AQ6ZSG2 479 aa18.28■□□□□ 0.52
LRRC47-202ENST00000462356 MORC1Q86VD1 984 aa18.28■□□□□ 0.52
LRRC47-202ENST00000462356 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
LRRC47-202ENST00000462356 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
LRRC47-202ENST00000462356 DISP2A7MBM2 1401 aa18.28■□□□□ 0.52
LRRC47-202ENST00000462356 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
LRRC47-202ENST00000462356 EXOC5O00471 708 aa18.27■□□□□ 0.52
LRRC47-202ENST00000462356 IL2RBP14784 551 aa18.27■□□□□ 0.52
LRRC47-202ENST00000462356 MARCH10Q8NA82 808 aaPredicted RBP18.27■□□□□ 0.52
LRRC47-202ENST00000462356 EP400Q96L91 3159 aa18.27■□□□□ 0.51
LRRC47-202ENST00000462356 FLT4P35916 1363 aa18.27■□□□□ 0.51
LRRC47-202ENST00000462356 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
LRRC47-202ENST00000462356 CC2D1BQ5T0F9 858 aaKnown RBP18.26■□□□□ 0.51
LRRC47-202ENST00000462356 CDCA7Q9BWT1 371 aaPredicted RBP18.26■□□□□ 0.51
LRRC47-202ENST00000462356 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
LRRC47-202ENST00000462356 INSRP06213 1382 aa18.25■□□□□ 0.51
LRRC47-202ENST00000462356 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
LRRC47-202ENST00000462356 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
LRRC47-202ENST00000462356 NSD2O96028 1365 aa18.23■□□□□ 0.51
LRRC47-202ENST00000462356 PTF1AQ7RTS3 328 aa18.23■□□□□ 0.51
LRRC47-202ENST00000462356 BAG6P46379 1132 aa18.22■□□□□ 0.51
LRRC47-202ENST00000462356 RGPD1P0DJD0 1748 aa18.22■□□□□ 0.51
LRRC47-202ENST00000462356 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
LRRC47-202ENST00000462356 APBA3O96018 575 aa18.21■□□□□ 0.51
LRRC47-202ENST00000462356 OVOS2A0A0G2JMS6 1433 aa18.21■□□□□ 0.51
LRRC47-202ENST00000462356 TNS2Q63HR2 1409 aa18.21■□□□□ 0.51
LRRC47-202ENST00000462356 TNS1Q9HBL0 1735 aaKnown RBP18.2■□□□□ 0.5
LRRC47-202ENST00000462356 KIF24Q5T7B8 1368 aa18.2■□□□□ 0.5
LRRC47-202ENST00000462356 DDX54Q8TDD1 881 aaKnown RBP18.2■□□□□ 0.5
LRRC47-202ENST00000462356 MEGF6O75095 1541 aa18.19■□□□□ 0.5
LRRC47-202ENST00000462356 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
LRRC47-202ENST00000462356 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
LRRC47-202ENST00000462356 EIF4A2Q14240 407 aaKnown RBP18.18■□□□□ 0.5
LRRC47-202ENST00000462356 EYA1Q99502 592 aa18.18■□□□□ 0.5
LRRC47-202ENST00000462356 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
LRRC47-202ENST00000462356 KCNQ2O43526 872 aa18.16■□□□□ 0.5
LRRC47-202ENST00000462356 ZCRB1Q8TBF4 217 aaKnown RBP18.16■□□□□ 0.5
LRRC47-202ENST00000462356 RAPGEF4Q8WZA2 1011 aa18.16■□□□□ 0.5
LRRC47-202ENST00000462356 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
LRRC47-202ENST00000462356 CAMKK2Q96RR4 588 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms