RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
APP-211ENST00000462267 TXNRD1Q16881 649 aa22.45■■□□□ 1.18
APP-211ENST00000462267 SGIP1Q9BQI5 828 aa22.45■■□□□ 1.18
APP-211ENST00000462267 LRRC37A3O60309 1634 aa22.45■■□□□ 1.18
APP-211ENST00000462267 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
APP-211ENST00000462267 TOPAZ1Q8N9V7 1692 aa22.44■■□□□ 1.18
APP-211ENST00000462267 CDCA7Q9BWT1 371 aaPredicted RBP22.44■■□□□ 1.18
APP-211ENST00000462267 ARHGEF28Q8N1W1 1705 aaKnown RBP22.43■■□□□ 1.18
APP-211ENST00000462267 TOM1L2Q6ZVM7 507 aa22.43■■□□□ 1.18
APP-211ENST00000462267 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
APP-211ENST00000462267 BRD4O60885 1362 aaPredicted RBP22.41■■□□□ 1.18
APP-211ENST00000462267 MAP3K5Q99683 1374 aa22.4■■□□□ 1.18
APP-211ENST00000462267 ZBTB7CA1YPR0 619 aa22.4■■□□□ 1.18
APP-211ENST00000462267 ARXQ96QS3 562 aa22.4■■□□□ 1.18
APP-211ENST00000462267 WDR17Q8IZU2 1322 aa22.38■■□□□ 1.17
APP-211ENST00000462267 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
APP-211ENST00000462267 NLRP6P59044 892 aa22.36■■□□□ 1.17
APP-211ENST00000462267 GPR162Q16538 588 aa22.35■■□□□ 1.17
APP-211ENST00000462267 PPIP5K1Q6PFW1 1433 aa22.34■■□□□ 1.17
APP-211ENST00000462267 SLIT3O75094 1523 aa22.33■■□□□ 1.17
APP-211ENST00000462267 EXOC5O00471 708 aa22.33■■□□□ 1.17
APP-211ENST00000462267 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.17
APP-211ENST00000462267 AXIN2Q9Y2T1 843 aa22.33■■□□□ 1.17
APP-211ENST00000462267 AKAP12Q02952 1782 aa22.33■■□□□ 1.16
APP-211ENST00000462267 SRPK2P78362 688 aaKnown RBP22.31■■□□□ 1.16
APP-211ENST00000462267 WNK3Q9BYP7 1800 aa22.31■■□□□ 1.16
APP-211ENST00000462267 COL18A1P39060 1754 aa22.3■■□□□ 1.16
APP-211ENST00000462267 CEP350Q5VT06 3117 aa22.29■■□□□ 1.16
APP-211ENST00000462267 USP6P35125 1406 aa22.29■■□□□ 1.16
APP-211ENST00000462267 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
APP-211ENST00000462267 CPSF1Q10570 1443 aaKnown RBP22.27■■□□□ 1.16
APP-211ENST00000462267 ARHGEF25Q86VW2 580 aa22.27■■□□□ 1.16
APP-211ENST00000462267 CABP2Q9NPB3 220 aa22.26■■□□□ 1.15
APP-211ENST00000462267 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
APP-211ENST00000462267 CABP1Q9NZU7 370 aa22.25■■□□□ 1.15
APP-211ENST00000462267 TNS2Q63HR2 1409 aa22.24■■□□□ 1.15
APP-211ENST00000462267 KCNH5Q8NCM2 988 aa22.24■■□□□ 1.15
APP-211ENST00000462267 SLC16A10Q8TF71 515 aa22.24■■□□□ 1.15
APP-211ENST00000462267 PAPPAQ13219 1627 aa22.24■■□□□ 1.15
APP-211ENST00000462267 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
APP-211ENST00000462267 POLD1P28340 1107 aa22.22■■□□□ 1.15
APP-211ENST00000462267 ZNF827Q17R98 1081 aa22.22■■□□□ 1.15
APP-211ENST00000462267 NHSQ6T4R5 1651 aa22.22■■□□□ 1.15
APP-211ENST00000462267 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
APP-211ENST00000462267 ACSBG1Q96GR2 724 aa22.21■■□□□ 1.15
APP-211ENST00000462267 CENPJQ9HC77 1338 aaPredicted RBP22.21■■□□□ 1.15
APP-211ENST00000462267 KLHL34Q8N239 644 aa22.2■■□□□ 1.14
APP-211ENST00000462267 PIK3C2AO00443 1686 aa22.19■■□□□ 1.14
APP-211ENST00000462267 KIAA1210Q9ULL0 1709 aa22.19■■□□□ 1.14
APP-211ENST00000462267 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
APP-211ENST00000462267 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
APP-211ENST00000462267 GRIN3BO60391 1043 aa22.17■■□□□ 1.14
APP-211ENST00000462267 NBPF1Q3BBV0 1214 aa22.17■■□□□ 1.14
APP-211ENST00000462267 AKT1S1Q96B36 256 aa22.17■■□□□ 1.14
APP-211ENST00000462267 LRRC4BQ9NT99 713 aa22.17■■□□□ 1.14
APP-211ENST00000462267 GOLGB1Q14789 3259 aaKnown RBP22.17■■□□□ 1.14
APP-211ENST00000462267 ABCC6O95255 1503 aa22.16■■□□□ 1.14
APP-211ENST00000462267 SOX12O15370 315 aa22.15■■□□□ 1.14
APP-211ENST00000462267 ZNF692Q9BU19 519 aaPredicted RBP22.15■■□□□ 1.14
APP-211ENST00000462267 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
APP-211ENST00000462267 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.14
APP-211ENST00000462267 SLC27A3Q5K4L6 730 aa22.14■■□□□ 1.13
APP-211ENST00000462267 QRICH2Q9H0J4 1663 aa22.14■■□□□ 1.13
APP-211ENST00000462267 NLGN2Q8NFZ4 835 aa22.13■■□□□ 1.13
APP-211ENST00000462267 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
APP-211ENST00000462267 IL2RBP14784 551 aa22.12■■□□□ 1.13
APP-211ENST00000462267 BTAF1O14981 1849 aa22.12■■□□□ 1.13
APP-211ENST00000462267 COL24A1Q17RW2 1714 aa22.11■■□□□ 1.13
APP-211ENST00000462267 PNPLA7Q6ZV29 1317 aa22.11■■□□□ 1.13
APP-211ENST00000462267 YBX3P16989 372 aaKnown RBP eCLIP22.1■■□□□ 1.13
APP-211ENST00000462267 NLRP2Q9NX02 1062 aa22.1■■□□□ 1.13
APP-211ENST00000462267 TFCP2L1Q9NZI6 479 aa22.1■■□□□ 1.13
APP-211ENST00000462267 NFAT5O94916 1531 aa22.1■■□□□ 1.13
APP-211ENST00000462267 QSER1Q2KHR3 1735 aa22.09■■□□□ 1.13
APP-211ENST00000462267 ERBB3P21860 1342 aa22.08■■□□□ 1.13
APP-211ENST00000462267 EVC2Q86UK5 1308 aa22.08■■□□□ 1.13
APP-211ENST00000462267 ATP10DQ9P241 1426 aa22.07■■□□□ 1.12
APP-211ENST00000462267 HSPA6P17066 643 aa22.07■■□□□ 1.12
APP-211ENST00000462267 GPBP1L1Q9HC44 474 aaPredicted RBP22.06■■□□□ 1.12
APP-211ENST00000462267 KAT6BQ8WYB5 2073 aa22.05■■□□□ 1.12
APP-211ENST00000462267 KTN1Q86UP2 1357 aaKnown RBP22■■□□□ 1.11
APP-211ENST00000462267 ANKRD24Q8TF21 1146 aa22■■□□□ 1.11
APP-211ENST00000462267 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
APP-211ENST00000462267 KCNQ4P56696 695 aa21.99■■□□□ 1.11
APP-211ENST00000462267 DDX54Q8TDD1 881 aaKnown RBP21.98■■□□□ 1.11
APP-211ENST00000462267 ADCY9O60503 1353 aa21.98■■□□□ 1.11
APP-211ENST00000462267 CD2APQ9Y5K6 639 aa21.97■■□□□ 1.11
APP-211ENST00000462267 TUBGCP6Q96RT7 1819 aa21.96■■□□□ 1.11
APP-211ENST00000462267 MSH5O43196 834 aa21.96■■□□□ 1.11
APP-211ENST00000462267 PRIM1P49642 420 aaKnown RBP21.96■■□□□ 1.11
APP-211ENST00000462267 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
APP-211ENST00000462267 COL23A1Q86Y22 540 aaPredicted RBP21.95■■□□□ 1.1
APP-211ENST00000462267 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
APP-211ENST00000462267 CCNL1Q9UK58 526 aaPredicted RBP21.94■■□□□ 1.1
APP-211ENST00000462267 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.93■■□□□ 1.1
APP-211ENST00000462267 ZNF526Q8TF50 670 aaPredicted RBP21.93■■□□□ 1.1
APP-211ENST00000462267 NME9Q86XW9 330 aa21.91■■□□□ 1.1
APP-211ENST00000462267 LY75O60449 1722 aa21.91■■□□□ 1.1
APP-211ENST00000462267 NSD2O96028 1365 aa21.9■■□□□ 1.1
APP-211ENST00000462267 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms