RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 EIF4A2Q14240 407 aaKnown RBP18.54■□□□□ 0.56
GTF3C5-208ENST00000461871 RSPH6AQ9H0K4 717 aa18.54■□□□□ 0.56
GTF3C5-208ENST00000461871 TNS3Q68CZ2 1445 aa18.53■□□□□ 0.56
GTF3C5-208ENST00000461871 ARHGEF25Q86VW2 580 aa18.53■□□□□ 0.56
GTF3C5-208ENST00000461871 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
GTF3C5-208ENST00000461871 TRMT2AQ8IZ69 625 aaKnown RBP18.53■□□□□ 0.56
GTF3C5-208ENST00000461871 NFAT5O94916 1531 aa18.53■□□□□ 0.56
GTF3C5-208ENST00000461871 E9PSI1 815 aa18.52■□□□□ 0.56
GTF3C5-208ENST00000461871 HOXC9P31274 260 aa18.52■□□□□ 0.56
GTF3C5-208ENST00000461871 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
GTF3C5-208ENST00000461871 WWC1Q8IX03 1113 aa18.52■□□□□ 0.56
GTF3C5-208ENST00000461871 UBAP1LF5GYI3 381 aa18.5■□□□□ 0.55
GTF3C5-208ENST00000461871 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
GTF3C5-208ENST00000461871 SLFN5Q08AF3 891 aa18.5■□□□□ 0.55
GTF3C5-208ENST00000461871 NUTM2GQ5VZR2 741 aa18.5■□□□□ 0.55
GTF3C5-208ENST00000461871 IL16Q14005 1332 aa18.49■□□□□ 0.55
GTF3C5-208ENST00000461871 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
GTF3C5-208ENST00000461871 KDRP35968 1356 aa18.49■□□□□ 0.55
GTF3C5-208ENST00000461871 ABCC6O95255 1503 aa18.49■□□□□ 0.55
GTF3C5-208ENST00000461871 PRKAR2BP31323 418 aa18.48■□□□□ 0.55
GTF3C5-208ENST00000461871 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
GTF3C5-208ENST00000461871 LMOD3Q0VAK6 560 aa18.48■□□□□ 0.55
GTF3C5-208ENST00000461871 ERICH6BQ5W0A0 696 aa18.48■□□□□ 0.55
GTF3C5-208ENST00000461871 IGSF1Q8N6C5 1336 aa18.48■□□□□ 0.55
GTF3C5-208ENST00000461871 RGPD1P0DJD0 1748 aa18.47■□□□□ 0.55
GTF3C5-208ENST00000461871 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
GTF3C5-208ENST00000461871 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
GTF3C5-208ENST00000461871 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
GTF3C5-208ENST00000461871 CPDO75976 1380 aa18.46■□□□□ 0.55
GTF3C5-208ENST00000461871 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
GTF3C5-208ENST00000461871 NEFLP07196 543 aa18.45■□□□□ 0.54
GTF3C5-208ENST00000461871 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
GTF3C5-208ENST00000461871 RNF123Q5XPI4 1314 aa18.45■□□□□ 0.54
GTF3C5-208ENST00000461871 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
GTF3C5-208ENST00000461871 PLEKHG2Q9H7P9 1386 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 SOX12O15370 315 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 TOM1O60784 492 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 RIPK4P57078 832 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 DUSP27Q5VZP5 1158 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 SULT6B1Q6IMI4 303 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 EYA1Q99502 592 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 MYH16Q9H6N6 1097 aa18.44■□□□□ 0.54
GTF3C5-208ENST00000461871 LTN1O94822 1766 aa18.43■□□□□ 0.54
GTF3C5-208ENST00000461871 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
GTF3C5-208ENST00000461871 HMOX1P09601 288 aa18.42■□□□□ 0.54
GTF3C5-208ENST00000461871 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
GTF3C5-208ENST00000461871 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
GTF3C5-208ENST00000461871 HSPA1LP34931 641 aa18.41■□□□□ 0.54
GTF3C5-208ENST00000461871 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
GTF3C5-208ENST00000461871 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
GTF3C5-208ENST00000461871 RCAN3Q9UKA8 241 aa18.4■□□□□ 0.54
GTF3C5-208ENST00000461871 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
GTF3C5-208ENST00000461871 AHDC1Q5TGY3 1603 aaPredicted RBP18.4■□□□□ 0.54
GTF3C5-208ENST00000461871 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
GTF3C5-208ENST00000461871 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
GTF3C5-208ENST00000461871 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
GTF3C5-208ENST00000461871 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
GTF3C5-208ENST00000461871 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
GTF3C5-208ENST00000461871 CRYBG1Q9Y4K1 1723 aa18.37■□□□□ 0.53
GTF3C5-208ENST00000461871 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
GTF3C5-208ENST00000461871 AEBP1Q8IUX7 1158 aa18.35■□□□□ 0.53
GTF3C5-208ENST00000461871 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
GTF3C5-208ENST00000461871 GNAI1P63096 354 aa18.34■□□□□ 0.53
GTF3C5-208ENST00000461871 ANKRD24Q8TF21 1146 aa18.34■□□□□ 0.53
GTF3C5-208ENST00000461871 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
GTF3C5-208ENST00000461871 COL18A1P39060 1754 aa18.33■□□□□ 0.53
GTF3C5-208ENST00000461871 ERBB3P21860 1342 aa18.33■□□□□ 0.53
GTF3C5-208ENST00000461871 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
GTF3C5-208ENST00000461871 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
GTF3C5-208ENST00000461871 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.52
GTF3C5-208ENST00000461871 NBPF4Q96M43 638 aa18.33■□□□□ 0.52
GTF3C5-208ENST00000461871 ROBO1Q9Y6N7 1651 aa18.33■□□□□ 0.52
GTF3C5-208ENST00000461871 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
GTF3C5-208ENST00000461871 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
GTF3C5-208ENST00000461871 BABAM1Q9NWV8 329 aa18.32■□□□□ 0.52
GTF3C5-208ENST00000461871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.522e-10■□□□□ 10
GTF3C5-208ENST00000461871 AXIN2Q9Y2T1 843 aa18.32■□□□□ 0.52
GTF3C5-208ENST00000461871 ZNF853P0CG23 659 aa18.31■□□□□ 0.52
GTF3C5-208ENST00000461871 PLEKHO1Q53GL0 409 aaPredicted RBP18.31■□□□□ 0.52
GTF3C5-208ENST00000461871 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
GTF3C5-208ENST00000461871 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
GTF3C5-208ENST00000461871 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
GTF3C5-208ENST00000461871 HAP1P54257 671 aaPredicted RBP18.3■□□□□ 0.52
GTF3C5-208ENST00000461871 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
GTF3C5-208ENST00000461871 LTV1Q96GA3 475 aaPredicted RBP18.3■□□□□ 0.52
GTF3C5-208ENST00000461871 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
GTF3C5-208ENST00000461871 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
GTF3C5-208ENST00000461871 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
GTF3C5-208ENST00000461871 PRDM11Q9NQV5 511 aa18.29■□□□□ 0.52
GTF3C5-208ENST00000461871 COL22A1Q8NFW1 1626 aaPredicted RBP18.29■□□□□ 0.52
GTF3C5-208ENST00000461871 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
GTF3C5-208ENST00000461871 ZBTB7CA1YPR0 619 aa18.27■□□□□ 0.52
GTF3C5-208ENST00000461871 FKBP8Q14318 412 aa18.27■□□□□ 0.52
GTF3C5-208ENST00000461871 LMO7Q8WWI1 1683 aa18.27■□□□□ 0.52
GTF3C5-208ENST00000461871 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.51
GTF3C5-208ENST00000461871 RRP1P56182 461 aaKnown RBP18.26■□□□□ 0.51
GTF3C5-208ENST00000461871 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
GTF3C5-208ENST00000461871 CHL1O00533 1208 aa18.25■□□□□ 0.51
GTF3C5-208ENST00000461871 PIP4K2BP78356 416 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms