RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 ADAMTS19Q8TE59 1207 aa8.68□□□□□ -1.02
PRPF4B-202ENST00000461612 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
PRPF4B-202ENST00000461612 KCTD15Q96SI1 283 aaPredicted RBP8.68□□□□□ -1.02
PRPF4B-202ENST00000461612 TOR4AQ9NXH8 423 aa8.68□□□□□ -1.02
PRPF4B-202ENST00000461612 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
PRPF4B-202ENST00000461612 NR5A1Q13285 461 aa8.67□□□□□ -1.02
PRPF4B-202ENST00000461612 ARID5BQ14865 1188 aa8.67□□□□□ -1.02
PRPF4B-202ENST00000461612 TRIM67Q6ZTA4 783 aa8.67□□□□□ -1.02
PRPF4B-202ENST00000461612 ADH1CP00326 375 aa8.66□□□□□ -1.02
PRPF4B-202ENST00000461612 GRM5P41594 1212 aa8.66□□□□□ -1.02
PRPF4B-202ENST00000461612 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
PRPF4B-202ENST00000461612 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
PRPF4B-202ENST00000461612 TLL2Q9Y6L7 1015 aa8.66□□□□□ -1.02
PRPF4B-202ENST00000461612 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 ALDH1A1P00352 501 aa8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 DHX9Q08211 1270 aaKnown RBP8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 SERPINA10Q9UK55 444 aa8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
PRPF4B-202ENST00000461612 WASF2Q9Y6W5 498 aa8.64□□□□□ -1.03
PRPF4B-202ENST00000461612 ARID3CA6NKF2 412 aa8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 LZTS3O60299 673 aaPredicted RBP8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 LAPTM4AQ15012 233 aa8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 MAP7D1Q3KQU3 841 aa8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 CCDC97Q96F63 343 aaPredicted RBP8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
PRPF4B-202ENST00000461612 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
PRPF4B-202ENST00000461612 J3QL48 77 aa8.61□□□□□ -1.03
PRPF4B-202ENST00000461612 FSHRP23945 695 aa8.61□□□□□ -1.03
PRPF4B-202ENST00000461612 NRG2O14511 850 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-202ENST00000461612 SMPD1P17405 629 aa8.6□□□□□ -1.03
PRPF4B-202ENST00000461612 NNTQ13423 1086 aa8.6□□□□□ -1.03
PRPF4B-202ENST00000461612 UCN2Q96RP3 112 aa8.6□□□□□ -1.03
PRPF4B-202ENST00000461612 C1orf115Q9H7X2 142 aa8.6□□□□□ -1.03
PRPF4B-202ENST00000461612 EMILIN1Q9Y6C2 1016 aa8.6□□□□□ -1.03
PRPF4B-202ENST00000461612 ATP9BO43861 1147 aa8.59□□□□□ -1.03
PRPF4B-202ENST00000461612 GFRA3O60609 400 aa8.59□□□□□ -1.03
PRPF4B-202ENST00000461612 SKIP12755 728 aa8.59□□□□□ -1.03
PRPF4B-202ENST00000461612 PPP1R12CQ9BZL4 782 aa8.59□□□□□ -1.03
PRPF4B-202ENST00000461612 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
PRPF4B-202ENST00000461612 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
PRPF4B-202ENST00000461612 DGAT1O75907 488 aa8.58□□□□□ -1.04
PRPF4B-202ENST00000461612 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
PRPF4B-202ENST00000461612 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
PRPF4B-202ENST00000461612 TFIP11Q9UBB9 837 aaKnown RBP8.58□□□□□ -1.04
PRPF4B-202ENST00000461612 PALM3A6NDB9 673 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 PIK3CDO00329 1044 aa8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 NR3C2P08235 984 aa8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 PPP1R26Q5T8A7 1209 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 TRAF7Q6Q0C0 670 aa8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 TBC1D9Q6ZT07 1266 aa8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 CCDC82Q8N4S0 544 aa8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 CCDC85AQ96PX6 553 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 DOLKQ9UPQ8 538 aa8.57□□□□□ -1.04
PRPF4B-202ENST00000461612 RAB15P59190 212 aa8.56□□□□□ -1.04
PRPF4B-202ENST00000461612 USP4Q13107 963 aa8.56□□□□□ -1.04
PRPF4B-202ENST00000461612 IRX2Q9BZI1 471 aaPredicted RBP8.56□□□□□ -1.04
PRPF4B-202ENST00000461612 PCDHB11Q9Y5F2 797 aa8.56□□□□□ -1.04
PRPF4B-202ENST00000461612 AVPP01185 164 aa8.55□□□□□ -1.04
PRPF4B-202ENST00000461612 MYT1Q01538 1121 aa8.55□□□□□ -1.04
PRPF4B-202ENST00000461612 KLF16Q9BXK1 252 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-202ENST00000461612 MAFBQ9Y5Q3 323 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-202ENST00000461612 FAM187AA6NFU0 413 aa8.54□□□□□ -1.04
PRPF4B-202ENST00000461612 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
PRPF4B-202ENST00000461612 WDR4P57081 412 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-202ENST00000461612 EML3Q32P44 896 aa8.54□□□□□ -1.04
PRPF4B-202ENST00000461612 TSGA10IPQ3SY00 556 aa8.54□□□□□ -1.04
PRPF4B-202ENST00000461612 CC2D2BQ6DHV5 1058 aa8.54□□□□□ -1.04
PRPF4B-202ENST00000461612 HPS1Q92902 700 aa8.54□□□□□ -1.04
PRPF4B-202ENST00000461612 MYCP01106 439 aaPredicted RBP8.53□□□□□ -1.04
PRPF4B-202ENST00000461612 ERVK-9P63128 1117 aa8.53□□□□□ -1.04
PRPF4B-202ENST00000461612 CTC1Q2NKJ3 1217 aa8.53□□□□□ -1.04
PRPF4B-202ENST00000461612 PKDCCQ504Y2 493 aa8.53□□□□□ -1.04
PRPF4B-202ENST00000461612 CFAP70Q5T0N1 1121 aa8.53□□□□□ -1.04
PRPF4B-202ENST00000461612 ESF1Q9H501 851 aaKnown RBP8.53□□□□□ -1.04
PRPF4B-202ENST00000461612 TMPRSS4Q9NRS4 437 aa8.53□□□□□ -1.04
PRPF4B-202ENST00000461612 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 TIMP2P16035 220 aa8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 LMOD1P29536 600 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 CDCA7Q9BWT1 371 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 NOD1Q9Y239 953 aa8.52□□□□□ -1.05
PRPF4B-202ENST00000461612 LILRA1O75019 489 aa8.51□□□□□ -1.05
PRPF4B-202ENST00000461612 ZIC2O95409 532 aaPredicted RBP8.51□□□□□ -1.05
PRPF4B-202ENST00000461612 NCOA4Q13772 614 aa8.51□□□□□ -1.05
PRPF4B-202ENST00000461612 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
PRPF4B-202ENST00000461612 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
PRPF4B-202ENST00000461612 ZNF784Q8NCA9 323 aaPredicted RBP8.51□□□□□ -1.05
PRPF4B-202ENST00000461612 ITPKCQ96DU7 683 aa8.51□□□□□ -1.05
PRPF4B-202ENST00000461612 ATP5J2-PTCD1G3V325 749 aa8.5□□□□□ -1.05
PRPF4B-202ENST00000461612 Q6ZVU0 165 aa8.5□□□□□ -1.05
PRPF4B-202ENST00000461612 VRTNQ9H8Y1 702 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms