RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 MTFR1LQ9H019 292 aa18.72■□□□□ 0.59
C9orf78-202ENST00000461349 PLEKHG3A1L390 1219 aa18.71■□□□□ 0.59
C9orf78-202ENST00000461349 TOM1L2Q6ZVM7 507 aa18.71■□□□□ 0.59
C9orf78-202ENST00000461349 SLC15A2Q16348 729 aa18.7■□□□□ 0.58
C9orf78-202ENST00000461349 PROM2Q8N271 834 aa18.7■□□□□ 0.58
C9orf78-202ENST00000461349 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
C9orf78-202ENST00000461349 PTF1AQ7RTS3 328 aa18.69■□□□□ 0.58
C9orf78-202ENST00000461349 STAC3Q96MF2 364 aa18.69■□□□□ 0.58
C9orf78-202ENST00000461349 CDCA7Q9BWT1 371 aaPredicted RBP18.69■□□□□ 0.58
C9orf78-202ENST00000461349 RGPD5Q99666 1765 aa18.68■□□□□ 0.58
C9orf78-202ENST00000461349 BCL9O00512 1426 aa18.68■□□□□ 0.58
C9orf78-202ENST00000461349 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
C9orf78-202ENST00000461349 GIGYF1O75420 1035 aaPredicted RBP18.67■□□□□ 0.58
C9orf78-202ENST00000461349 COL18A1P39060 1754 aa18.67■□□□□ 0.58
C9orf78-202ENST00000461349 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
C9orf78-202ENST00000461349 MARCH10Q8NA82 808 aaPredicted RBP18.66■□□□□ 0.58
C9orf78-202ENST00000461349 ARXQ96QS3 562 aa18.66■□□□□ 0.58
C9orf78-202ENST00000461349 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
C9orf78-202ENST00000461349 SLIT3O75094 1523 aa18.65■□□□□ 0.58
C9orf78-202ENST00000461349 NHSQ6T4R5 1651 aa18.64■□□□□ 0.57
C9orf78-202ENST00000461349 GPR162Q16538 588 aa18.64■□□□□ 0.57
C9orf78-202ENST00000461349 SGIP1Q9BQI5 828 aa18.64■□□□□ 0.57
C9orf78-202ENST00000461349 WDR17Q8IZU2 1322 aa18.64■□□□□ 0.57
C9orf78-202ENST00000461349 MAP3K5Q99683 1374 aa18.64■□□□□ 0.57
C9orf78-202ENST00000461349 NLRP6P59044 892 aa18.63■□□□□ 0.57
C9orf78-202ENST00000461349 QRICH2Q9H0J4 1663 aa18.63■□□□□ 0.57
C9orf78-202ENST00000461349 KIAA1210Q9ULL0 1709 aa18.63■□□□□ 0.57
C9orf78-202ENST00000461349 SRPK2P78362 688 aaKnown RBP18.62■□□□□ 0.57
C9orf78-202ENST00000461349 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
C9orf78-202ENST00000461349 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
C9orf78-202ENST00000461349 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
C9orf78-202ENST00000461349 EXOC5O00471 708 aa18.6■□□□□ 0.57
C9orf78-202ENST00000461349 BTAF1O14981 1849 aa18.59■□□□□ 0.57
C9orf78-202ENST00000461349 CSB-PGBD3P0DP91 1061 aa18.59■□□□□ 0.57
C9orf78-202ENST00000461349 USP6P35125 1406 aa18.58■□□□□ 0.57
C9orf78-202ENST00000461349 CPSF1Q10570 1443 aaKnown RBP18.58■□□□□ 0.57
C9orf78-202ENST00000461349 QSER1Q2KHR3 1735 aa18.58■□□□□ 0.57
C9orf78-202ENST00000461349 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
C9orf78-202ENST00000461349 KLHL34Q8N239 644 aa18.57■□□□□ 0.56
C9orf78-202ENST00000461349 CARD10Q9BWT7 1032 aa18.57■□□□□ 0.56
C9orf78-202ENST00000461349 AXIN2Q9Y2T1 843 aa18.57■□□□□ 0.56
C9orf78-202ENST00000461349 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
C9orf78-202ENST00000461349 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
C9orf78-202ENST00000461349 TNS2Q63HR2 1409 aa18.56■□□□□ 0.56
C9orf78-202ENST00000461349 CCDC7Q96M83 1385 aa18.55■□□□□ 0.56
C9orf78-202ENST00000461349 COL24A1Q17RW2 1714 aa18.54■□□□□ 0.56
C9orf78-202ENST00000461349 CEP350Q5VT06 3117 aa18.54■□□□□ 0.56
C9orf78-202ENST00000461349 POLD1P28340 1107 aa18.54■□□□□ 0.56
C9orf78-202ENST00000461349 CABP2Q9NPB3 220 aa18.54■□□□□ 0.56
C9orf78-202ENST00000461349 ABCC6O95255 1503 aa18.54■□□□□ 0.56
C9orf78-202ENST00000461349 KCNH5Q8NCM2 988 aa18.53■□□□□ 0.56
C9orf78-202ENST00000461349 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
C9orf78-202ENST00000461349 ACSBG1Q96GR2 724 aa18.52■□□□□ 0.56
C9orf78-202ENST00000461349 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
C9orf78-202ENST00000461349 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.55
C9orf78-202ENST00000461349 CENPJQ9HC77 1338 aaPredicted RBP18.51■□□□□ 0.55
C9orf78-202ENST00000461349 ARHGEF25Q86VW2 580 aa18.51■□□□□ 0.55
C9orf78-202ENST00000461349 SLC16A10Q8TF71 515 aa18.51■□□□□ 0.55
C9orf78-202ENST00000461349 SOX12O15370 315 aa18.5■□□□□ 0.55
C9orf78-202ENST00000461349 TUBGCP6Q96RT7 1819 aa18.5■□□□□ 0.55
C9orf78-202ENST00000461349 ZNF827Q17R98 1081 aa18.49■□□□□ 0.55
C9orf78-202ENST00000461349 GRIN3BO60391 1043 aa18.47■□□□□ 0.55
C9orf78-202ENST00000461349 LTN1O94822 1766 aa18.46■□□□□ 0.55
C9orf78-202ENST00000461349 NFAT5O94916 1531 aa18.45■□□□□ 0.54
C9orf78-202ENST00000461349 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
C9orf78-202ENST00000461349 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
C9orf78-202ENST00000461349 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
C9orf78-202ENST00000461349 SLC27A3Q5K4L6 730 aa18.43■□□□□ 0.54
C9orf78-202ENST00000461349 NLGN2Q8NFZ4 835 aa18.43■□□□□ 0.54
C9orf78-202ENST00000461349 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
C9orf78-202ENST00000461349 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
C9orf78-202ENST00000461349 TTC21AQ8NDW8 1320 aa18.43■□□□□ 0.54
C9orf78-202ENST00000461349 IL2RBP14784 551 aa18.42■□□□□ 0.54
C9orf78-202ENST00000461349 NLRP2Q9NX02 1062 aa18.42■□□□□ 0.54
C9orf78-202ENST00000461349 TFCP2L1Q9NZI6 479 aa18.42■□□□□ 0.54
C9orf78-202ENST00000461349 PNPLA7Q6ZV29 1317 aa18.42■□□□□ 0.54
C9orf78-202ENST00000461349 ATP10DQ9P241 1426 aa18.41■□□□□ 0.54
C9orf78-202ENST00000461349 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
C9orf78-202ENST00000461349 LY75O60449 1722 aa18.4■□□□□ 0.54
C9orf78-202ENST00000461349 GPBP1L1Q9HC44 474 aaPredicted RBP18.4■□□□□ 0.54
C9orf78-202ENST00000461349 YBX3P16989 372 aaKnown RBP eCLIP18.39■□□□□ 0.535e-8■■■□□ 16.9
C9orf78-202ENST00000461349 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
C9orf78-202ENST00000461349 ERBB3P21860 1342 aa18.39■□□□□ 0.53
C9orf78-202ENST00000461349 HSPA6P17066 643 aa18.38■□□□□ 0.53
C9orf78-202ENST00000461349 USP54Q70EL1 1684 aa18.38■□□□□ 0.53
C9orf78-202ENST00000461349 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
C9orf78-202ENST00000461349 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
C9orf78-202ENST00000461349 FAM208AQ9UK61 1670 aaKnown RBP18.36■□□□□ 0.53
C9orf78-202ENST00000461349 MSH5O43196 834 aa18.35■□□□□ 0.53
C9orf78-202ENST00000461349 DDX54Q8TDD1 881 aaKnown RBP18.33■□□□□ 0.52
C9orf78-202ENST00000461349 ANKRD24Q8TF21 1146 aa18.33■□□□□ 0.52
C9orf78-202ENST00000461349 SYTL4Q96C24 671 aaPredicted RBP18.33■□□□□ 0.52
C9orf78-202ENST00000461349 KCNQ4P56696 695 aa18.31■□□□□ 0.52
C9orf78-202ENST00000461349 ZNF526Q8TF50 670 aaPredicted RBP18.31■□□□□ 0.52
C9orf78-202ENST00000461349 C5P01031 1676 aa18.3■□□□□ 0.52
C9orf78-202ENST00000461349 ADCY9O60503 1353 aa18.3■□□□□ 0.52
C9orf78-202ENST00000461349 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
C9orf78-202ENST00000461349 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
C9orf78-202ENST00000461349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
C9orf78-202ENST00000461349 CCNL1Q9UK58 526 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms