RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 WWC1Q8IX03 1113 aa9.72□□□□□ -0.85
LSG1-205ENST00000461343 CCDC146Q8IYE0 955 aa9.72□□□□□ -0.85
LSG1-205ENST00000461343 IP6K1Q92551 441 aa9.72□□□□□ -0.85
LSG1-205ENST00000461343 ZNF428Q96B54 188 aa9.72□□□□□ -0.85
LSG1-205ENST00000461343 CHMP4AQ9BY43 222 aa9.72□□□□□ -0.85
LSG1-205ENST00000461343 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.85
LSG1-205ENST00000461343 TRPM3Q9HCF6 1732 aaPredicted RBP9.71□□□□□ -0.85
LSG1-205ENST00000461343 GCP02774 474 aa9.71□□□□□ -0.86
LSG1-205ENST00000461343 TMPOP42166 694 aaKnown RBP9.71□□□□□ -0.86
LSG1-205ENST00000461343 NFE2L2Q16236 605 aa9.71□□□□□ -0.86
LSG1-205ENST00000461343 LMOD2Q6P5Q4 547 aa9.71□□□□□ -0.86
LSG1-205ENST00000461343 GAS2L2Q8NHY3 880 aa9.71□□□□□ -0.86
LSG1-205ENST00000461343 RBM33Q96EV2 1170 aaKnown RBP9.71□□□□□ -0.86
LSG1-205ENST00000461343 PLEKHF1Q96S99 279 aa9.71□□□□□ -0.86
LSG1-205ENST00000461343 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.86
LSG1-205ENST00000461343 RCAN3Q9UKA8 241 aa9.71□□□□□ -0.86
LSG1-205ENST00000461343 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
LSG1-205ENST00000461343 HOXC9P31274 260 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 PRKAR2BP31323 418 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 SLFN5Q08AF3 891 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 EIF4A2Q14240 407 aaKnown RBP9.7□□□□□ -0.86
LSG1-205ENST00000461343 BRINP3Q76B58 766 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 SPATA31A3Q5VYP0 1347 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 KDRP35968 1356 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 NFAT5O94916 1531 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 ALS2Q96Q42 1657 aa9.7□□□□□ -0.86
LSG1-205ENST00000461343 XIRP1Q702N8 1843 aaKnown RBP9.7□□□□□ -0.86
LSG1-205ENST00000461343 TOM1O60784 492 aa9.69□□□□□ -0.86
LSG1-205ENST00000461343 CPDO75976 1380 aa9.69□□□□□ -0.86
LSG1-205ENST00000461343 MS4A1P11836 297 aa9.69□□□□□ -0.86
LSG1-205ENST00000461343 RIPK4P57078 832 aa9.69□□□□□ -0.86
LSG1-205ENST00000461343 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
LSG1-205ENST00000461343 IGSF1Q8N6C5 1336 aa9.69□□□□□ -0.86
LSG1-205ENST00000461343 RTF1Q92541 710 aaKnown RBP9.69□□□□□ -0.86
LSG1-205ENST00000461343 PXDNQ92626 1479 aa9.69□□□□□ -0.86
LSG1-205ENST00000461343 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
LSG1-205ENST00000461343 AMOTQ4VCS5 1084 aa9.68□□□□□ -0.86
LSG1-205ENST00000461343 HSP90AB2PQ58FF8 381 aa9.68□□□□□ -0.86
LSG1-205ENST00000461343 SULT6B1Q6IMI4 303 aa9.68□□□□□ -0.86
LSG1-205ENST00000461343 ARHGEF25Q86VW2 580 aa9.68□□□□□ -0.86
LSG1-205ENST00000461343 SALL2Q9Y467 1007 aaPredicted RBP9.68□□□□□ -0.86
LSG1-205ENST00000461343 SUPT16HQ9Y5B9 1047 aaKnown RBP9.68□□□□□ -0.86
LSG1-205ENST00000461343 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
LSG1-205ENST00000461343 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
LSG1-205ENST00000461343 SOX12O15370 315 aa9.67□□□□□ -0.86
LSG1-205ENST00000461343 GNAI1P63096 354 aa9.67□□□□□ -0.86
LSG1-205ENST00000461343 AAMPQ13685 434 aa9.67□□□□□ -0.86
LSG1-205ENST00000461343 DUSP27Q5VZP5 1158 aa9.67□□□□□ -0.86
LSG1-205ENST00000461343 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
LSG1-205ENST00000461343 LRRC59Q96AG4 307 aaKnown RBP9.67□□□□□ -0.86
LSG1-205ENST00000461343 LTN1O94822 1766 aa9.67□□□□□ -0.86
LSG1-205ENST00000461343 RGPD1P0DJD0 1748 aa9.67□□□□□ -0.86
LSG1-205ENST00000461343 SOS1Q07889 1333 aaPredicted RBP9.66□□□□□ -0.86
LSG1-205ENST00000461343 MARF1Q9Y4F3 1742 aaKnown RBP9.66□□□□□ -0.86
LSG1-205ENST00000461343 IFT57Q9NWB7 429 aa9.66□□□□□ -0.86
LSG1-205ENST00000461343 BABAM1Q9NWV8 329 aa9.66□□□□□ -0.86
LSG1-205ENST00000461343 NHSL1Q5SYE7 1610 aa9.66□□□□□ -0.86
LSG1-205ENST00000461343 PEAK1Q9H792 1746 aa9.65□□□□□ -0.86
LSG1-205ENST00000461343 AHDC1Q5TGY3 1603 aaPredicted RBP9.65□□□□□ -0.86
LSG1-205ENST00000461343 HMOX1P09601 288 aa9.65□□□□□ -0.86
LSG1-205ENST00000461343 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
LSG1-205ENST00000461343 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
LSG1-205ENST00000461343 LTBP4Q8N2S1 1624 aa9.64□□□□□ -0.87
LSG1-205ENST00000461343 FKBP8Q14318 412 aa9.64□□□□□ -0.87
LSG1-205ENST00000461343 PLEKHO1Q53GL0 409 aaPredicted RBP9.64□□□□□ -0.87
LSG1-205ENST00000461343 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
LSG1-205ENST00000461343 NCAPD2Q15021 1401 aa9.64□□□□□ -0.87
LSG1-205ENST00000461343 RRP1P56182 461 aaKnown RBP9.63□□□□□ -0.87
LSG1-205ENST00000461343 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
LSG1-205ENST00000461343 EYA1Q99502 592 aa9.63□□□□□ -0.87
LSG1-205ENST00000461343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.87
LSG1-205ENST00000461343 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
LSG1-205ENST00000461343 ERBB3P21860 1342 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 KIF16BQ96L93 1317 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 IPO8O15397 1037 aaKnown RBP9.62□□□□□ -0.87
LSG1-205ENST00000461343 CANXP27824 592 aaKnown RBP9.62□□□□□ -0.87
LSG1-205ENST00000461343 C1orf141Q5JVX7 400 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 RAPGEF4Q8WZA2 1011 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 CFAP44Q96MT7 982 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 PRDM11Q9NQV5 511 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 PPP4R2Q9NY27 417 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
LSG1-205ENST00000461343 RRP7AQ9Y3A4 280 aaKnown RBP9.62□□□□□ -0.87
LSG1-205ENST00000461343 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
LSG1-205ENST00000461343 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
LSG1-205ENST00000461343 FBLN1P23142 703 aa9.61□□□□□ -0.87
LSG1-205ENST00000461343 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
LSG1-205ENST00000461343 ALDH1L2Q3SY69 923 aa9.61□□□□□ -0.87
LSG1-205ENST00000461343 SPG7Q9UQ90 795 aa9.61□□□□□ -0.87
LSG1-205ENST00000461343 MAP3K5Q99683 1374 aa9.61□□□□□ -0.87
LSG1-205ENST00000461343 FANCIQ9NVI1 1328 aa9.6□□□□□ -0.87
LSG1-205ENST00000461343 ZBTB7CA1YPR0 619 aa9.6□□□□□ -0.87
LSG1-205ENST00000461343 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
LSG1-205ENST00000461343 ROBO1Q9Y6N7 1651 aa9.59□□□□□ -0.87
LSG1-205ENST00000461343 CAMTA1Q9Y6Y1 1673 aa9.59□□□□□ -0.87
LSG1-205ENST00000461343 ZC3H6P61129 1189 aaKnown RBP9.59□□□□□ -0.87
LSG1-205ENST00000461343 AKAP4Q5JQC9 854 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms