RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 KCNH5Q8NCM2 988 aa31.45■■■□□ 2.63
HMG20B-207ENST00000461099 CPSF1Q10570 1443 aaKnown RBP31.44■■■□□ 2.62
HMG20B-207ENST00000461099 ROCK2O75116 1388 aaKnown RBP31.43■■■□□ 2.62
HMG20B-207ENST00000461099 SBF2Q86WG5 1849 aa31.43■■■□□ 2.62
HMG20B-207ENST00000461099 CDCA7Q9BWT1 371 aaPredicted RBP31.43■■■□□ 2.62
HMG20B-207ENST00000461099 BCL11BQ9C0K0 894 aaPredicted RBP31.42■■■□□ 2.62
HMG20B-207ENST00000461099 SPON1Q9HCB6 807 aa31.42■■■□□ 2.62
HMG20B-207ENST00000461099 TTC21AQ8NDW8 1320 aa31.42■■■□□ 2.62
HMG20B-207ENST00000461099 KCNQ2O43526 872 aa31.4■■■□□ 2.62
HMG20B-207ENST00000461099 NEUROD1Q13562 356 aa31.4■■■□□ 2.62
HMG20B-207ENST00000461099 MARCH10Q8NA82 808 aaPredicted RBP31.4■■■□□ 2.62
HMG20B-207ENST00000461099 AKAP12Q02952 1782 aa31.4■■■□□ 2.62
HMG20B-207ENST00000461099 RGPD3A6NKT7 1758 aaPredicted RBP31.39■■■□□ 2.62
HMG20B-207ENST00000461099 RGPD4Q7Z3J3 1758 aa31.39■■■□□ 2.62
HMG20B-207ENST00000461099 SOX12O15370 315 aa31.39■■■□□ 2.62
HMG20B-207ENST00000461099 CARD10Q9BWT7 1032 aa31.39■■■□□ 2.62
HMG20B-207ENST00000461099 PTF1AQ7RTS3 328 aa31.38■■■□□ 2.61
HMG20B-207ENST00000461099 CSB-PGBD3P0DP91 1061 aa31.37■■■□□ 2.61
HMG20B-207ENST00000461099 PPP1R1BQ9UD71 204 aaPredicted RBP31.37■■■□□ 2.61
HMG20B-207ENST00000461099 RGPD5Q99666 1765 aa31.37■■■□□ 2.61
HMG20B-207ENST00000461099 WNK3Q9BYP7 1800 aa31.37■■■□□ 2.61
HMG20B-207ENST00000461099 BCL9O00512 1426 aa31.36■■■□□ 2.61
HMG20B-207ENST00000461099 KTN1Q86UP2 1357 aaKnown RBP31.36■■■□□ 2.61
HMG20B-207ENST00000461099 PROM2Q8N271 834 aa31.32■■■□□ 2.6
HMG20B-207ENST00000461099 ANO8Q9HCE9 1232 aaPredicted RBP31.32■■■□□ 2.6
HMG20B-207ENST00000461099 NFAT5O94916 1531 aa31.32■■■□□ 2.6
HMG20B-207ENST00000461099 EXOC5O00471 708 aa31.31■■■□□ 2.6
HMG20B-207ENST00000461099 CCDC7Q96M83 1385 aa31.29■■■□□ 2.6
HMG20B-207ENST00000461099 ABCC6O95255 1503 aa31.27■■■□□ 2.6
HMG20B-207ENST00000461099 NINLQ9Y2I6 1382 aa31.27■■■□□ 2.6
HMG20B-207ENST00000461099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.26■■■□□ 2.59
HMG20B-207ENST00000461099 SBNO2Q9Y2G9 1366 aa31.26■■■□□ 2.59
HMG20B-207ENST00000461099 MON2Q7Z3U7 1717 aa31.25■■■□□ 2.59
HMG20B-207ENST00000461099 YY1P25490 414 aa31.25■■■□□ 2.59
HMG20B-207ENST00000461099 PDGFDQ9GZP0 370 aaPredicted RBP31.24■■■□□ 2.59
HMG20B-207ENST00000461099 USP31Q70CQ4 1352 aa31.24■■■□□ 2.59
HMG20B-207ENST00000461099 CASZ1Q86V15 1759 aa31.23■■■□□ 2.59
HMG20B-207ENST00000461099 DCAF8L1A6NGE4 600 aa31.23■■■□□ 2.59
HMG20B-207ENST00000461099 TXNRD1Q16881 649 aa31.23■■■□□ 2.59
HMG20B-207ENST00000461099 TNS2Q63HR2 1409 aa31.21■■■□□ 2.59
HMG20B-207ENST00000461099 NME9Q86XW9 330 aa31.2■■■□□ 2.59
HMG20B-207ENST00000461099 CARD11Q9BXL7 1154 aa31.2■■■□□ 2.59
HMG20B-207ENST00000461099 TMC1Q8TDI8 760 aa31.19■■■□□ 2.58
HMG20B-207ENST00000461099 NLRP2Q9NX02 1062 aa31.19■■■□□ 2.58
HMG20B-207ENST00000461099 STK32BQ9NY57 414 aa31.19■■■□□ 2.58
HMG20B-207ENST00000461099 CD163L1Q9NR16 1453 aa31.19■■■□□ 2.58
HMG20B-207ENST00000461099 ERBB3P21860 1342 aa31.19■■■□□ 2.58
HMG20B-207ENST00000461099 ZBTB7AO95365 584 aa31.18■■■□□ 2.58
HMG20B-207ENST00000461099 USP54Q70EL1 1684 aa31.17■■■□□ 2.58
HMG20B-207ENST00000461099 HDGFL2Q7Z4V5 671 aaPredicted RBP31.17■■■□□ 2.58
HMG20B-207ENST00000461099 SLC15A2Q16348 729 aa31.16■■■□□ 2.58
HMG20B-207ENST00000461099 SLC12A5Q9H2X9 1139 aa31.15■■■□□ 2.58
HMG20B-207ENST00000461099 PTGER2P43116 358 aa31.14■■■□□ 2.58
HMG20B-207ENST00000461099 IL2RBP14784 551 aa31.13■■■□□ 2.57
HMG20B-207ENST00000461099 ACSBG1Q96GR2 724 aa31.13■■■□□ 2.57
HMG20B-207ENST00000461099 ATF5Q9Y2D1 282 aaPredicted RBP31.13■■■□□ 2.57
HMG20B-207ENST00000461099 LTN1O94822 1766 aa31.12■■■□□ 2.57
HMG20B-207ENST00000461099 ANKRD24Q8TF21 1146 aa31.12■■■□□ 2.57
HMG20B-207ENST00000461099 EDC4Q6P2E9 1401 aaKnown RBP31.12■■■□□ 2.57
HMG20B-207ENST00000461099 NHSQ6T4R5 1651 aa31.11■■■□□ 2.57
HMG20B-207ENST00000461099 TERF2IPQ9NYB0 399 aa31.11■■■□□ 2.57
HMG20B-207ENST00000461099 PUS7Q96PZ0 661 aaKnown RBP31.08■■■□□ 2.57
HMG20B-207ENST00000461099 MYOM1P52179 1685 aa31.06■■■□□ 2.56
HMG20B-207ENST00000461099 MTFR1LQ9H019 292 aa31.06■■■□□ 2.56
HMG20B-207ENST00000461099 A0A1W2PP64 1363 aa31.05■■■□□ 2.56
HMG20B-207ENST00000461099 IP6K1Q92551 441 aa31.03■■■□□ 2.56
HMG20B-207ENST00000461099 KAT6BQ8WYB5 2073 aa31.01■■■□□ 2.56
HMG20B-207ENST00000461099 SGIP1Q9BQI5 828 aa31.01■■■□□ 2.55
HMG20B-207ENST00000461099 FHDC1Q9C0D6 1143 aaPredicted RBP31.01■■■□□ 2.55
HMG20B-207ENST00000461099 TONSLQ96HA7 1378 aa31.01■■■□□ 2.55
HMG20B-207ENST00000461099 BTAF1O14981 1849 aa31.01■■■□□ 2.55
HMG20B-207ENST00000461099 SYT17Q9BSW7 474 aa31■■■□□ 2.55
HMG20B-207ENST00000461099 PAPPAQ13219 1627 aa30.98■■■□□ 2.55
HMG20B-207ENST00000461099 UTRNP46939 3433 aa30.97■■■□□ 2.55
HMG20B-207ENST00000461099 DDX54Q8TDD1 881 aaKnown RBP30.96■■■□□ 2.55
HMG20B-207ENST00000461099 LTV1Q96GA3 475 aaPredicted RBP30.96■■■□□ 2.55
HMG20B-207ENST00000461099 LRRC4BQ9NT99 713 aa30.96■■■□□ 2.55
HMG20B-207ENST00000461099 TESK2Q96S53 571 aa30.95■■■□□ 2.55
HMG20B-207ENST00000461099 ZNF827Q17R98 1081 aa30.94■■■□□ 2.54
HMG20B-207ENST00000461099 COG3Q96JB2 828 aa30.93■■■□□ 2.54
HMG20B-207ENST00000461099 ARXQ96QS3 562 aa30.93■■■□□ 2.54
HMG20B-207ENST00000461099 ST20-MTHFSA0A0A6YYL1 179 aa30.92■■■□□ 2.54
HMG20B-207ENST00000461099 FAM208AQ9UK61 1670 aaKnown RBP30.92■■■□□ 2.54
HMG20B-207ENST00000461099 SLC24A1O60721 1099 aa30.9■■■□□ 2.54
HMG20B-207ENST00000461099 SLC27A3Q5K4L6 730 aa30.9■■■□□ 2.54
HMG20B-207ENST00000461099 MAP3K19Q56UN5 1328 aa30.9■■■□□ 2.54
HMG20B-207ENST00000461099 HOXC9P31274 260 aa30.89■■■□□ 2.54
HMG20B-207ENST00000461099 AMPHP49418 695 aa30.88■■■□□ 2.53
HMG20B-207ENST00000461099 AKT1S1Q96B36 256 aa30.88■■■□□ 2.53
HMG20B-207ENST00000461099 FBLN1P23142 703 aa30.87■■■□□ 2.53
HMG20B-207ENST00000461099 PRIM1P49642 420 aaKnown RBP30.86■■■□□ 2.53
HMG20B-207ENST00000461099 MAP3K5Q99683 1374 aa30.85■■■□□ 2.53
HMG20B-207ENST00000461099 SLC16A10Q8TF71 515 aa30.85■■■□□ 2.53
HMG20B-207ENST00000461099 SYTL4Q96C24 671 aaPredicted RBP30.85■■■□□ 2.53
HMG20B-207ENST00000461099 ZNF784Q8NCA9 323 aaPredicted RBP30.84■■■□□ 2.53
HMG20B-207ENST00000461099 ZCRB1Q8TBF4 217 aaKnown RBP30.84■■■□□ 2.53
HMG20B-207ENST00000461099 ANKRD36BQ8N2N9 1353 aa30.83■■■□□ 2.53
HMG20B-207ENST00000461099 KCNQ4P56696 695 aa30.8■■■□□ 2.52
HMG20B-207ENST00000461099 TFCP2L1Q9NZI6 479 aa30.8■■■□□ 2.52
HMG20B-207ENST00000461099 RGPD2P0DJD1 1756 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms