RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 L3MBTL2Q969R5 705 aa7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 C14orf93Q9H972 538 aaKnown RBP7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SPG7Q9UQ90 795 aa7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 NLRP13Q86W25 1043 aa7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 A0A087WZG4 1122 aa7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SAFB2Q14151 953 aaKnown RBP eCLIP7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 NLRP2Q9NX02 1062 aa7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 ZRANB1Q9UGI0 708 aa7.66□□□□□ -1.18
HLA-DQA1-205ENST00000460633 RFX1P22670 979 aa7.65□□□□□ -1.18
HLA-DQA1-205ENST00000460633 MYO3AQ8NEV4 1616 aa7.65□□□□□ -1.18
HLA-DQA1-205ENST00000460633 VWDEQ8N2E2 1590 aa7.65□□□□□ -1.18
HLA-DQA1-205ENST00000460633 TTLL12Q14166 644 aaPredicted RBP7.65□□□□□ -1.18
HLA-DQA1-205ENST00000460633 STK32BQ9NY57 414 aa7.65□□□□□ -1.18
HLA-DQA1-205ENST00000460633 PTMSP20962 102 aa7.65□□□□□ -1.19
HLA-DQA1-205ENST00000460633 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CRBNQ96SW2 442 aa7.65□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CEP152O94986 1710 aa7.65□□□□□ -1.19
HLA-DQA1-205ENST00000460633 LMTK3Q96Q04 1460 aa7.65□□□□□ -1.19
HLA-DQA1-205ENST00000460633 FBXO31Q5XUX0 539 aaPredicted RBP7.65□□□□□ -1.19
HLA-DQA1-205ENST00000460633 GOLGA6L4A6NEF3 574 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CEBPAP49715 358 aaPredicted RBP7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 PLEKHO1Q53GL0 409 aaPredicted RBP7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 NKTRP30414 1462 aaKnown RBP7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 TPM4P67936 248 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 RASSF8Q8NHQ8 419 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 PRDM11Q9NQV5 511 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ADAMTSL3P82987 1691 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ESCO1Q5FWF5 840 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CENPQQ7L2Z9 268 aaPredicted RBP7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 C19orf44Q9H6X5 657 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 FOXD4L1Q9NU39 408 aa7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 SETD1BQ9UPS6 1966 aaKnown RBP7.64□□□□□ -1.19
HLA-DQA1-205ENST00000460633 NOP2P46087 812 aaKnown RBP7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ZNF772Q68DY9 489 aaPredicted RBP7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CPLX2Q6PUV4 134 aaKnown RBP7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 RWDD1Q9H446 243 aaPredicted RBP7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 TPM2P07951 284 aa7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 AMOTL2Q9Y2J4 779 aa7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 FAM135BQ49AJ0 1406 aa7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 TOM1L2Q6ZVM7 507 aa7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 LTV1Q96GA3 475 aaPredicted RBP7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 RALGAPBQ86X10 1494 aa7.63□□□□□ -1.19
HLA-DQA1-205ENST00000460633 BRD2P25440 801 aaKnown RBP7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 KCNH5Q8NCM2 988 aa7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 NPHP3Q7Z494 1330 aa7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CABP2Q9NPB3 220 aa7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 USP47Q96K76 1375 aa7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 NSD2O96028 1365 aa7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 MPHOSPH10O00566 681 aaKnown RBP7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 PMFBP1Q8TBY8 1022 aa7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ZNF526Q8TF50 670 aaPredicted RBP7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 TRAK1Q9UPV9 953 aa7.62□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ZPR1O75312 459 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 NCKAP5LQ9HCH0 1330 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 DDX11L8A8MPP1 907 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CLEC11AQ9Y240 323 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 TTC21AQ8NDW8 1320 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ABCC11Q96J66 1382 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 TOMM22Q9NS69 142 aa7.61□□□□□ -1.19
HLA-DQA1-205ENST00000460633 SLIT1O75093 1534 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 DRC7Q8IY82 874 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 STRN4Q9NRL3 753 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ANKARQ7Z5J8 1434 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 B4DLN1 442 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 MRPL12P52815 198 aaKnown RBP7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 TMEM132AQ24JP5 1023 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ARHGEF10O15013 1369 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 MYBBP1AQ9BQG0 1328 aaKnown RBP7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ERICH2A1L162 156 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 MYO1BO43795 1136 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CCDC146Q8IYE0 955 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 AK7Q96M32 723 aa7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ZNF142P52746 1687 aaPredicted RBP7.6□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CSPP1Q1MSJ5 1256 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 DLC1Q96QB1 1528 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 DCCP43146 1447 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 HOOK2Q96ED9 719 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 COL17A1Q9UMD9 1497 aaPredicted RBP7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 SETBP1Q9Y6X0 1596 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 DESP17661 470 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 RDXP35241 583 aaKnown RBP7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 AAMPQ13685 434 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 FAM43AQ8N2R8 423 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 NGEFQ8N5V2 710 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 SMARCC1Q92922 1105 aaPredicted RBP7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 CDCA7Q9BWT1 371 aaPredicted RBP7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 PIK3C2GO75747 1445 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 YTHDC2Q9H6S0 1430 aaKnown RBP7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 DHX16O60231 1041 aaKnown RBP7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 ITPRIPQ8IWB1 547 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 PAF1Q8N7H5 531 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 FAM13BQ9NYF5 915 aa7.59□□□□□ -1.19
HLA-DQA1-205ENST00000460633 KIF22Q14807 665 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 E9PCH4 1651 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 RAD21O60216 631 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PTCH1Q13635 1447 aa7.58□□□□□ -1.2
HLA-DQA1-205ENST00000460633 PRAG1Q86YV5 1406 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms