RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SOX12O15370 315 aa14.84□□□□□ -0.03
SMNDC1-203ENST00000460483 CNGB1Q14028 1251 aaPredicted RBP14.84□□□□□ -0.03
SMNDC1-203ENST00000460483 CABLES1Q8TDN4 633 aa14.84□□□□□ -0.03
SMNDC1-203ENST00000460483 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
SMNDC1-203ENST00000460483 MED1Q15648 1581 aaPredicted RBP14.84□□□□□ -0.03
SMNDC1-203ENST00000460483 TRPM3Q9HCF6 1732 aaPredicted RBP14.83□□□□□ -0.03
SMNDC1-203ENST00000460483 TNNT2P45379 298 aaPredicted RBP14.83□□□□□ -0.04
SMNDC1-203ENST00000460483 ZC3H6P61129 1189 aaKnown RBP14.83□□□□□ -0.04
SMNDC1-203ENST00000460483 PRKRIP1Q9H875 184 aaPredicted RBP14.83□□□□□ -0.04
SMNDC1-203ENST00000460483 ADAMTS2O95450 1211 aa14.82□□□□□ -0.04
SMNDC1-203ENST00000460483 ARHGEF25Q86VW2 580 aa14.82□□□□□ -0.04
SMNDC1-203ENST00000460483 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
SMNDC1-203ENST00000460483 MYBBP1AQ9BQG0 1328 aaKnown RBP14.82□□□□□ -0.04
SMNDC1-203ENST00000460483 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
SMNDC1-203ENST00000460483 ZBTB7CA1YPR0 619 aa14.81□□□□□ -0.04
SMNDC1-203ENST00000460483 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
SMNDC1-203ENST00000460483 EVA1CP58658 441 aa14.81□□□□□ -0.04
SMNDC1-203ENST00000460483 NGLY1Q96IV0 654 aa14.81□□□□□ -0.04
SMNDC1-203ENST00000460483 PARD3Q8TEW0 1356 aa14.81□□□□□ -0.04
SMNDC1-203ENST00000460483 SLIT3O75094 1523 aa14.81□□□□□ -0.04
SMNDC1-203ENST00000460483 ALS2Q96Q42 1657 aa14.81□□□□□ -0.04
SMNDC1-203ENST00000460483 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 IP6K1Q92551 441 aa14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 FLT4P35916 1363 aa14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 KIAA0232Q92628 1395 aa14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 SMG6Q86US8 1419 aaKnown RBP14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 COL22A1Q8NFW1 1626 aaPredicted RBP14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
SMNDC1-203ENST00000460483 PIK3C2AO00443 1686 aa14.79□□□□□ -0.04
SMNDC1-203ENST00000460483 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
SMNDC1-203ENST00000460483 BLMP54132 1417 aaPredicted RBP14.78□□□□□ -0.04
SMNDC1-203ENST00000460483 MAP3K19Q56UN5 1328 aa14.78□□□□□ -0.04
SMNDC1-203ENST00000460483 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
SMNDC1-203ENST00000460483 MTHFSP49914 203 aa14.78□□□□□ -0.04
SMNDC1-203ENST00000460483 RRS1Q15050 365 aaKnown RBP14.78□□□□□ -0.04
SMNDC1-203ENST00000460483 C8orf37Q96NL8 207 aa14.78□□□□□ -0.04
SMNDC1-203ENST00000460483 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
SMNDC1-203ENST00000460483 ABCC6O95255 1503 aa14.76□□□□□ -0.05
SMNDC1-203ENST00000460483 HOXC9P31274 260 aa14.76□□□□□ -0.05
SMNDC1-203ENST00000460483 ZNF772Q68DY9 489 aaPredicted RBP14.76□□□□□ -0.05
SMNDC1-203ENST00000460483 KIF20BQ96Q89 1820 aa14.76□□□□□ -0.05
SMNDC1-203ENST00000460483 INSRP06213 1382 aa14.75□□□□□ -0.05
SMNDC1-203ENST00000460483 USP54Q70EL1 1684 aa14.75□□□□□ -0.05
SMNDC1-203ENST00000460483 FAM83GA6ND36 823 aa14.75□□□□□ -0.05
SMNDC1-203ENST00000460483 FNBP4Q8N3X1 1017 aaPredicted RBP14.75□□□□□ -0.05
SMNDC1-203ENST00000460483 PNNQ9H307 717 aaKnown RBP14.75□□□□□ -0.05
SMNDC1-203ENST00000460483 BTG4Q9NY30 223 aa14.75□□□□□ -0.05
SMNDC1-203ENST00000460483 DIAPH1O60610 1272 aaKnown RBP14.74□□□□□ -0.05
SMNDC1-203ENST00000460483 CHRNA2Q15822 529 aa14.74□□□□□ -0.05
SMNDC1-203ENST00000460483 SSUH2Q9Y2M2 353 aa14.74□□□□□ -0.05
SMNDC1-203ENST00000460483 EMILIN1Q9Y6C2 1016 aa14.74□□□□□ -0.05
SMNDC1-203ENST00000460483 NFAT5O94916 1531 aa14.73□□□□□ -0.05
SMNDC1-203ENST00000460483 NEFMP07197 916 aa14.73□□□□□ -0.05
SMNDC1-203ENST00000460483 UNC5CLQ8IV45 518 aa14.73□□□□□ -0.05
SMNDC1-203ENST00000460483 USP21Q9UK80 565 aa14.73□□□□□ -0.05
SMNDC1-203ENST00000460483 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
SMNDC1-203ENST00000460483 CCER2I3L3R5 266 aa14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 WDR43Q15061 677 aaKnown RBP eCLIP14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 HSP90AB2PQ58FF8 381 aa14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 TOM1L2Q6ZVM7 507 aa14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 ANKRD24Q8TF21 1146 aa14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 STRN4Q9NRL3 753 aa14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 TRPC5Q9UL62 973 aaPredicted RBP14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 CCDC9Q9Y3X0 531 aaKnown RBP14.71□□□□□ -0.05
SMNDC1-203ENST00000460483 ERBB3P21860 1342 aa14.7□□□□□ -0.06
SMNDC1-203ENST00000460483 WDR17Q8IZU2 1322 aa14.7□□□□□ -0.06
SMNDC1-203ENST00000460483 ANKRD26Q9UPS8 1709 aa14.7□□□□□ -0.06
SMNDC1-203ENST00000460483 CDCA7Q9BWT1 371 aaPredicted RBP14.7□□□□□ -0.06
SMNDC1-203ENST00000460483 NLRP2Q9NX02 1062 aa14.7□□□□□ -0.06
SMNDC1-203ENST00000460483 THRAP3Q9Y2W1 955 aaKnown RBP14.7□□□□□ -0.06
SMNDC1-203ENST00000460483 PHRF1Q9P1Y6 1649 aaKnown RBP14.7□□□□□ -0.06
SMNDC1-203ENST00000460483 AFF2P51816 1311 aa14.69□□□□□ -0.06
SMNDC1-203ENST00000460483 FBLN1P23142 703 aa14.69□□□□□ -0.06
SMNDC1-203ENST00000460483 LTV1Q96GA3 475 aaPredicted RBP14.69□□□□□ -0.06
SMNDC1-203ENST00000460483 MRS2Q9HD23 443 aa14.69□□□□□ -0.06
SMNDC1-203ENST00000460483 COL14A1Q05707 1796 aaKnown RBP14.68□□□□□ -0.06
SMNDC1-203ENST00000460483 VPS72Q15906 364 aa14.68□□□□□ -0.06
SMNDC1-203ENST00000460483 CARD10Q9BWT7 1032 aa14.68□□□□□ -0.06
SMNDC1-203ENST00000460483 AXIN2Q9Y2T1 843 aa14.68□□□□□ -0.06
SMNDC1-203ENST00000460483 SLIT2O94813 1529 aa14.67□□□□□ -0.06
SMNDC1-203ENST00000460483 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
SMNDC1-203ENST00000460483 EIF4A2Q14240 407 aaKnown RBP14.67□□□□□ -0.06
SMNDC1-203ENST00000460483 CRB1P82279 1406 aa14.66□□□□□ -0.06
SMNDC1-203ENST00000460483 LRP6O75581 1613 aa14.66□□□□□ -0.06
SMNDC1-203ENST00000460483 RAPGEF4Q8WZA2 1011 aa14.66□□□□□ -0.06
SMNDC1-203ENST00000460483 COL5A2P05997 1499 aaPredicted RBP14.65□□□□□ -0.06
SMNDC1-203ENST00000460483 PLEKHG2Q9H7P9 1386 aa14.65□□□□□ -0.06
SMNDC1-203ENST00000460483 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
SMNDC1-203ENST00000460483 IL13P35225 146 aa14.65□□□□□ -0.06
SMNDC1-203ENST00000460483 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMNDC1-203ENST00000460483 TCP11L2Q8N4U5 519 aa14.65□□□□□ -0.06
SMNDC1-203ENST00000460483 QTRT2Q9H974 415 aaKnown RBP14.65□□□□□ -0.06
SMNDC1-203ENST00000460483 FCHSD2O94868 740 aa14.64□□□□□ -0.07
SMNDC1-203ENST00000460483 LARP1Q6PKG0 1096 aaKnown RBP14.64□□□□□ -0.07
SMNDC1-203ENST00000460483 CRYBG1Q9Y4K1 1723 aa14.63□□□□□ -0.07
SMNDC1-203ENST00000460483 CAMTA1Q9Y6Y1 1673 aa14.63□□□□□ -0.07
SMNDC1-203ENST00000460483 GJD4Q96KN9 370 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms