RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 HOXC9P31274 260 aa14.4□□□□□ -0.1
FN1-214ENST00000460217 AMPHP49418 695 aa14.4□□□□□ -0.1
FN1-214ENST00000460217 RGPD5Q99666 1765 aa14.39□□□□□ -0.11
FN1-214ENST00000460217 PPM1GO15355 546 aaPredicted RBP14.39□□□□□ -0.11
FN1-214ENST00000460217 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
FN1-214ENST00000460217 CCDC184Q52MB2 194 aa14.39□□□□□ -0.11
FN1-214ENST00000460217 MRS2Q9HD23 443 aa14.39□□□□□ -0.11
FN1-214ENST00000460217 PRDM11Q9NQV5 511 aa14.39□□□□□ -0.11
FN1-214ENST00000460217 HSP90AB2PQ58FF8 381 aa14.38□□□□□ -0.11
FN1-214ENST00000460217 FAM208AQ9UK61 1670 aaKnown RBP14.37□□□□□ -0.11
FN1-214ENST00000460217 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
FN1-214ENST00000460217 LRP6O75581 1613 aa14.37□□□□□ -0.11
FN1-214ENST00000460217 CAMTA1Q9Y6Y1 1673 aa14.36□□□□□ -0.11
FN1-214ENST00000460217 RGPD1P0DJD0 1748 aa14.36□□□□□ -0.11
FN1-214ENST00000460217 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
FN1-214ENST00000460217 DIAPH1O60610 1272 aaKnown RBP14.36□□□□□ -0.11
FN1-214ENST00000460217 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
FN1-214ENST00000460217 PLCH1Q4KWH8 1693 aa14.36□□□□□ -0.11
FN1-214ENST00000460217 IL13P35225 146 aa14.35□□□□□ -0.11
FN1-214ENST00000460217 CHRNA2Q15822 529 aa14.35□□□□□ -0.11
FN1-214ENST00000460217 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
FN1-214ENST00000460217 ERBB3P21860 1342 aa14.35□□□□□ -0.11
FN1-214ENST00000460217 COL5A2P05997 1499 aaPredicted RBP14.34□□□□□ -0.11
FN1-214ENST00000460217 NUTM2BA6NNL0 878 aaPredicted RBP14.34□□□□□ -0.11
FN1-214ENST00000460217 NUTM2EB1AL46 878 aaPredicted RBP14.34□□□□□ -0.11
FN1-214ENST00000460217 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
FN1-214ENST00000460217 NUTM2AQ8IVF1 878 aaPredicted RBP14.34□□□□□ -0.11
FN1-214ENST00000460217 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
FN1-214ENST00000460217 SLIT2O94813 1529 aa14.33□□□□□ -0.12
FN1-214ENST00000460217 ZBTB7CA1YPR0 619 aa14.33□□□□□ -0.12
FN1-214ENST00000460217 ADAMTS2O95450 1211 aa14.33□□□□□ -0.12
FN1-214ENST00000460217 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
FN1-214ENST00000460217 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
FN1-214ENST00000460217 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
FN1-214ENST00000460217 ANKRD24Q8TF21 1146 aa14.31□□□□□ -0.12
FN1-214ENST00000460217 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.31□□□□□ -0.12
FN1-214ENST00000460217 IGSF1Q8N6C5 1336 aa14.31□□□□□ -0.12
FN1-214ENST00000460217 WDR43Q15061 677 aaKnown RBP eCLIP14.3□□□□□ -0.12
FN1-214ENST00000460217 WDR17Q8IZU2 1322 aa14.3□□□□□ -0.12
FN1-214ENST00000460217 KDRP35968 1356 aa14.3□□□□□ -0.12
FN1-214ENST00000460217 FNBP4Q8N3X1 1017 aaPredicted RBP14.29□□□□□ -0.12
FN1-214ENST00000460217 EYA1Q99502 592 aa14.29□□□□□ -0.12
FN1-214ENST00000460217 BTG4Q9NY30 223 aa14.29□□□□□ -0.12
FN1-214ENST00000460217 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
FN1-214ENST00000460217 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
FN1-214ENST00000460217 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.12
FN1-214ENST00000460217 LTV1Q96GA3 475 aaPredicted RBP14.28□□□□□ -0.12
FN1-214ENST00000460217 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
FN1-214ENST00000460217 CRB1P82279 1406 aa14.27□□□□□ -0.12
FN1-214ENST00000460217 FCHSD2O94868 740 aa14.27□□□□□ -0.13
FN1-214ENST00000460217 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.13
FN1-214ENST00000460217 NGLY1Q96IV0 654 aa14.27□□□□□ -0.13
FN1-214ENST00000460217 C8orf37Q96NL8 207 aa14.27□□□□□ -0.13
FN1-214ENST00000460217 ADAMTS8Q9UP79 889 aa14.27□□□□□ -0.13
FN1-214ENST00000460217 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
FN1-214ENST00000460217 CSB-PGBD3P0DP91 1061 aa14.26□□□□□ -0.13
FN1-214ENST00000460217 EVA1CP58658 441 aa14.26□□□□□ -0.13
FN1-214ENST00000460217 NBPF6Q5VWK0 638 aa14.26□□□□□ -0.13
FN1-214ENST00000460217 NBPF4Q96M43 638 aa14.26□□□□□ -0.13
FN1-214ENST00000460217 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
FN1-214ENST00000460217 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
FN1-214ENST00000460217 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
FN1-214ENST00000460217 FAM9BQ8IZU0 186 aa14.25□□□□□ -0.13
FN1-214ENST00000460217 CARD10Q9BWT7 1032 aa14.25□□□□□ -0.13
FN1-214ENST00000460217 RSPH6AQ9H0K4 717 aa14.25□□□□□ -0.13
FN1-214ENST00000460217 PNNQ9H307 717 aaKnown RBP14.25□□□□□ -0.13
FN1-214ENST00000460217 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
FN1-214ENST00000460217 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
FN1-214ENST00000460217 STRN4Q9NRL3 753 aa14.24□□□□□ -0.13
FN1-214ENST00000460217 HMOX1P09601 288 aa14.23□□□□□ -0.13
FN1-214ENST00000460217 AEBP1Q8IUX7 1158 aa14.23□□□□□ -0.13
FN1-214ENST00000460217 PLEKHF1Q96S99 279 aa14.23□□□□□ -0.13
FN1-214ENST00000460217 WNK3Q9BYP7 1800 aa14.22□□□□□ -0.13
FN1-214ENST00000460217 AFF2P51816 1311 aa14.22□□□□□ -0.13
FN1-214ENST00000460217 VPS72Q15906 364 aa14.22□□□□□ -0.13
FN1-214ENST00000460217 USP21Q9UK80 565 aa14.22□□□□□ -0.13
FN1-214ENST00000460217 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.13
FN1-214ENST00000460217 SPATA31A5Q5VU36 1347 aa14.21□□□□□ -0.13
FN1-214ENST00000460217 SPATA31A7Q8IWB4 1347 aa14.21□□□□□ -0.13
FN1-214ENST00000460217 PRKAR2BP31323 418 aa14.21□□□□□ -0.13
FN1-214ENST00000460217 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
FN1-214ENST00000460217 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
FN1-214ENST00000460217 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
FN1-214ENST00000460217 USHBP1Q8N6Y0 703 aa14.2□□□□□ -0.14
FN1-214ENST00000460217 THRAP3Q9Y2W1 955 aaKnown RBP14.2□□□□□ -0.14
FN1-214ENST00000460217 ATRNO75882 1429 aa14.2□□□□□ -0.14
FN1-214ENST00000460217 PKD1L3Q7Z443 1732 aa14.19□□□□□ -0.14
FN1-214ENST00000460217 DISP2A7MBM2 1401 aa14.19□□□□□ -0.14
FN1-214ENST00000460217 NEFMP07197 916 aa14.19□□□□□ -0.14
FN1-214ENST00000460217 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
FN1-214ENST00000460217 MEGF6O75095 1541 aa14.19□□□□□ -0.14
FN1-214ENST00000460217 MAPK8IP3Q9UPT6 1336 aa14.18□□□□□ -0.14
FN1-214ENST00000460217 OVOS2A0A0G2JMS6 1433 aa14.18□□□□□ -0.14
FN1-214ENST00000460217 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
FN1-214ENST00000460217 BARGINQ6ZT62 677 aa14.18□□□□□ -0.14
FN1-214ENST00000460217 NGEFQ8N5V2 710 aa14.18□□□□□ -0.14
FN1-214ENST00000460217 RAPGEF4Q8WZA2 1011 aa14.18□□□□□ -0.14
FN1-214ENST00000460217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.14
FN1-214ENST00000460217 TRPC5Q9UL62 973 aaPredicted RBP14.18□□□□□ -0.14
FN1-214ENST00000460217 IL2RBP14784 551 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms