RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CRB1P82279 1406 aa21.86■■□□□ 1.09
SDF4-204ENST00000459994 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
SDF4-204ENST00000459994 ARHGEF25Q86VW2 580 aa21.85■■□□□ 1.09
SDF4-204ENST00000459994 TCP11L2Q8N4U5 519 aa21.85■■□□□ 1.09
SDF4-204ENST00000459994 SF3B2Q13435 895 aaKnown RBP21.83■■□□□ 1.09
SDF4-204ENST00000459994 USP31Q70CQ4 1352 aa21.83■■□□□ 1.08
SDF4-204ENST00000459994 USP47Q96K76 1375 aa21.82■■□□□ 1.08
SDF4-204ENST00000459994 MYOM1P52179 1685 aa21.82■■□□□ 1.08
SDF4-204ENST00000459994 EDC4Q6P2E9 1401 aaKnown RBP21.81■■□□□ 1.08
SDF4-204ENST00000459994 EN1Q05925 392 aaPredicted RBP21.81■■□□□ 1.08
SDF4-204ENST00000459994 RREB1Q92766 1687 aa21.8■■□□□ 1.08
SDF4-204ENST00000459994 KCNH5Q8NCM2 988 aa21.8■■□□□ 1.08
SDF4-204ENST00000459994 TRIM37O94972 964 aa21.79■■□□□ 1.08
SDF4-204ENST00000459994 HDGFL2Q7Z4V5 671 aaPredicted RBP21.79■■□□□ 1.08
SDF4-204ENST00000459994 THRAP3Q9Y2W1 955 aaKnown RBP21.79■■□□□ 1.08
SDF4-204ENST00000459994 OVOS2A0A0J9YW53 1432 aa21.79■■□□□ 1.08
SDF4-204ENST00000459994 OVOS2Q6IE36 1432 aa21.79■■□□□ 1.08
SDF4-204ENST00000459994 WDR17Q8IZU2 1322 aa21.79■■□□□ 1.08
SDF4-204ENST00000459994 BAG6P46379 1132 aa21.78■■□□□ 1.08
SDF4-204ENST00000459994 TOM1L2Q6ZVM7 507 aa21.78■■□□□ 1.08
SDF4-204ENST00000459994 PUS7Q96PZ0 661 aaKnown RBP21.78■■□□□ 1.08
SDF4-204ENST00000459994 ABCC6O95255 1503 aa21.78■■□□□ 1.08
SDF4-204ENST00000459994 RGPD2P0DJD1 1756 aa21.78■■□□□ 1.08
SDF4-204ENST00000459994 NUP188Q5SRE5 1749 aa21.77■■□□□ 1.08
SDF4-204ENST00000459994 DISP2A7MBM2 1401 aa21.77■■□□□ 1.08
SDF4-204ENST00000459994 EIF4G2P78344 907 aaKnown RBP eCLIP21.76■■□□□ 1.073e-7■■■■■ 30.4
SDF4-204ENST00000459994 PDE3BQ13370 1112 aa21.76■■□□□ 1.07
SDF4-204ENST00000459994 FAM196AQ6ZSG2 479 aa21.76■■□□□ 1.07
SDF4-204ENST00000459994 KIF20BQ96Q89 1820 aa21.76■■□□□ 1.07
SDF4-204ENST00000459994 EZH2Q15910 746 aaKnown RBP21.75■■□□□ 1.07
SDF4-204ENST00000459994 TERF2IPQ9NYB0 399 aa21.74■■□□□ 1.07
SDF4-204ENST00000459994 SRCAPQ6ZRS2 3230 aa21.73■■□□□ 1.07
SDF4-204ENST00000459994 PSDA5PKW4 1024 aaPredicted RBP21.72■■□□□ 1.07
SDF4-204ENST00000459994 HSPA5P11021 654 aaKnown RBP21.72■■□□□ 1.07
SDF4-204ENST00000459994 FBLN1P23142 703 aa21.72■■□□□ 1.07
SDF4-204ENST00000459994 NINLQ9Y2I6 1382 aa21.72■■□□□ 1.07
SDF4-204ENST00000459994 CSB-PGBD3P0DP91 1061 aa21.71■■□□□ 1.07
SDF4-204ENST00000459994 CAMKK2Q96RR4 588 aa21.71■■□□□ 1.07
SDF4-204ENST00000459994 ANKRD36BQ8N2N9 1353 aa21.7■■□□□ 1.06
SDF4-204ENST00000459994 APBA3O96018 575 aa21.69■■□□□ 1.06
SDF4-204ENST00000459994 TMF1P82094 1093 aa21.69■■□□□ 1.06
SDF4-204ENST00000459994 PTF1AQ7RTS3 328 aa21.69■■□□□ 1.06
SDF4-204ENST00000459994 CARD10Q9BWT7 1032 aa21.69■■□□□ 1.06
SDF4-204ENST00000459994 DDB1Q16531 1140 aa21.68■■□□□ 1.06
SDF4-204ENST00000459994 MARCH10Q8NA82 808 aaPredicted RBP21.68■■□□□ 1.06
SDF4-204ENST00000459994 ERBB3P21860 1342 aa21.68■■□□□ 1.06
SDF4-204ENST00000459994 OVOS2A0A0G2JMS6 1433 aa21.68■■□□□ 1.06
SDF4-204ENST00000459994 FAM208AQ9UK61 1670 aaKnown RBP21.67■■□□□ 1.06
SDF4-204ENST00000459994 LRP5O75197 1615 aa21.67■■□□□ 1.06
SDF4-204ENST00000459994 RGPD3A6NKT7 1758 aaPredicted RBP21.66■■□□□ 1.06
SDF4-204ENST00000459994 RGPD4Q7Z3J3 1758 aa21.66■■□□□ 1.06
SDF4-204ENST00000459994 SLC24A1O60721 1099 aa21.65■■□□□ 1.06
SDF4-204ENST00000459994 CCDC7Q96M83 1385 aa21.64■■□□□ 1.06
SDF4-204ENST00000459994 ANKRD24Q8TF21 1146 aa21.64■■□□□ 1.05
SDF4-204ENST00000459994 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
SDF4-204ENST00000459994 R3HDM1Q15032 1099 aaKnown RBP21.63■■□□□ 1.05
SDF4-204ENST00000459994 TNS2Q63HR2 1409 aa21.63■■□□□ 1.05
SDF4-204ENST00000459994 MAP3K19Q56UN5 1328 aa21.62■■□□□ 1.05
SDF4-204ENST00000459994 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
SDF4-204ENST00000459994 NLRP2Q9NX02 1062 aa21.62■■□□□ 1.05
SDF4-204ENST00000459994 NHSQ6T4R5 1651 aa21.62■■□□□ 1.05
SDF4-204ENST00000459994 KAT6BQ8WYB5 2073 aa21.61■■□□□ 1.05
SDF4-204ENST00000459994 FYB1O15117 783 aa21.61■■□□□ 1.05
SDF4-204ENST00000459994 COG3Q96JB2 828 aa21.61■■□□□ 1.05
SDF4-204ENST00000459994 IP6K1Q92551 441 aa21.6■■□□□ 1.05
SDF4-204ENST00000459994 LTV1Q96GA3 475 aaPredicted RBP21.6■■□□□ 1.05
SDF4-204ENST00000459994 CARD14Q9BXL6 1004 aa21.6■■□□□ 1.05
SDF4-204ENST00000459994 CDCA7Q9BWT1 371 aaPredicted RBP21.59■■□□□ 1.05
SDF4-204ENST00000459994 BTAF1O14981 1849 aa21.58■■□□□ 1.05
SDF4-204ENST00000459994 MAP2P11137 1827 aaKnown RBP21.58■■□□□ 1.05
SDF4-204ENST00000459994 HOXC9P31274 260 aa21.58■■□□□ 1.05
SDF4-204ENST00000459994 RRS1Q15050 365 aaKnown RBP21.58■■□□□ 1.05
SDF4-204ENST00000459994 PARD3Q8TEW0 1356 aa21.58■■□□□ 1.04
SDF4-204ENST00000459994 BCL9O00512 1426 aa21.57■■□□□ 1.04
SDF4-204ENST00000459994 EXOC5O00471 708 aa21.57■■□□□ 1.04
SDF4-204ENST00000459994 NSD3Q9BZ95 1437 aa21.56■■□□□ 1.04
SDF4-204ENST00000459994 ANKRD26Q9UPS8 1709 aa21.55■■□□□ 1.04
SDF4-204ENST00000459994 IL2RBP14784 551 aa21.55■■□□□ 1.04
SDF4-204ENST00000459994 ZNF316A6NFI3 1004 aaPredicted RBP21.54■■□□□ 1.04
SDF4-204ENST00000459994 KCNQ2O43526 872 aa21.54■■□□□ 1.04
SDF4-204ENST00000459994 BCL11BQ9C0K0 894 aaPredicted RBP21.54■■□□□ 1.04
SDF4-204ENST00000459994 DOT1LQ8TEK3 1739 aa21.54■■□□□ 1.04
SDF4-204ENST00000459994 AMPHP49418 695 aa21.53■■□□□ 1.04
SDF4-204ENST00000459994 CDCA8Q53HL2 280 aa21.53■■□□□ 1.04
SDF4-204ENST00000459994 PROM2Q8N271 834 aa21.52■■□□□ 1.04
SDF4-204ENST00000459994 ACSBG1Q96GR2 724 aa21.52■■□□□ 1.04
SDF4-204ENST00000459994 CASZ1Q86V15 1759 aa21.51■■□□□ 1.03
SDF4-204ENST00000459994 MEGF6O75095 1541 aa21.51■■□□□ 1.03
SDF4-204ENST00000459994 C11orf95C9JLR9 678 aaPredicted RBP21.51■■□□□ 1.03
SDF4-204ENST00000459994 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
SDF4-204ENST00000459994 PLSCR1O15162 318 aa21.5■■□□□ 1.03
SDF4-204ENST00000459994 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
SDF4-204ENST00000459994 ANO8Q9HCE9 1232 aaPredicted RBP21.5■■□□□ 1.03
SDF4-204ENST00000459994 USHBP1Q8N6Y0 703 aa21.48■■□□□ 1.03
SDF4-204ENST00000459994 HSP90AB2PQ58FF8 381 aa21.47■■□□□ 1.03
SDF4-204ENST00000459994 NBPF6Q5VWK0 638 aa21.47■■□□□ 1.03
SDF4-204ENST00000459994 NBPF4Q96M43 638 aa21.47■■□□□ 1.03
SDF4-204ENST00000459994 EMILIN1Q9Y6C2 1016 aa21.46■■□□□ 1.03
SDF4-204ENST00000459994 PAPPAQ13219 1627 aa21.46■■□□□ 1.03
SDF4-204ENST00000459994 KIF7Q2M1P5 1343 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms