RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 UCN2Q96RP3 112 aa12.35□□□□□ -0.43
CKAP2-204ENST00000459902 KCTD15Q96SI1 283 aaPredicted RBP12.35□□□□□ -0.43
CKAP2-204ENST00000459902 ESPNB1AK53 854 aa12.34□□□□□ -0.43
CKAP2-204ENST00000459902 SNIP1Q8TAD8 396 aaKnown RBP12.34□□□□□ -0.43
CKAP2-204ENST00000459902 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
CKAP2-204ENST00000459902 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 PRR20EP86478 221 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 PRR20CP86479 221 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 PRR20DP86480 221 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 PRR20BP86481 221 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 PRR20AP86496 221 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 CCDC97Q96F63 343 aaPredicted RBP12.32□□□□□ -0.44
CKAP2-204ENST00000459902 SERPINA10Q9UK55 444 aa12.32□□□□□ -0.44
CKAP2-204ENST00000459902 ADH1CP00326 375 aa12.31□□□□□ -0.44
CKAP2-204ENST00000459902 TBC1D9Q6ZT07 1266 aa12.31□□□□□ -0.44
CKAP2-204ENST00000459902 CYP4X1Q8N118 509 aa12.31□□□□□ -0.44
CKAP2-204ENST00000459902 TOR4AQ9NXH8 423 aa12.31□□□□□ -0.44
CKAP2-204ENST00000459902 TTC24A2A3L6 582 aaPredicted RBP12.3□□□□□ -0.44
CKAP2-204ENST00000459902 FSHRP23945 695 aa12.3□□□□□ -0.44
CKAP2-204ENST00000459902 TSGA10IPQ3SY00 556 aa12.3□□□□□ -0.44
CKAP2-204ENST00000459902 RNF135Q8IUD6 432 aa12.3□□□□□ -0.44
CKAP2-204ENST00000459902 PPP1R12CQ9BZL4 782 aa12.3□□□□□ -0.44
CKAP2-204ENST00000459902 TFIP11Q9UBB9 837 aaKnown RBP12.3□□□□□ -0.44
CKAP2-204ENST00000459902 J3QL48 77 aa12.29□□□□□ -0.44
CKAP2-204ENST00000459902 RAB15P59190 212 aa12.29□□□□□ -0.44
CKAP2-204ENST00000459902 INTS6LQ5JSJ4 861 aaKnown RBP12.29□□□□□ -0.44
CKAP2-204ENST00000459902 ARID3AQ99856 593 aa12.29□□□□□ -0.44
CKAP2-204ENST00000459902 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
CKAP2-204ENST00000459902 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
CKAP2-204ENST00000459902 RNF20Q5VTR2 975 aa12.28□□□□□ -0.44
CKAP2-204ENST00000459902 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
CKAP2-204ENST00000459902 SKIP12755 728 aa12.27□□□□□ -0.45
CKAP2-204ENST00000459902 NR5A1Q13285 461 aa12.27□□□□□ -0.45
CKAP2-204ENST00000459902 NFATC2IPQ8NCF5 419 aa12.27□□□□□ -0.45
CKAP2-204ENST00000459902 CCDC85AQ96PX6 553 aaPredicted RBP12.27□□□□□ -0.45
CKAP2-204ENST00000459902 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
CKAP2-204ENST00000459902 ATP9BO43861 1147 aa12.26□□□□□ -0.45
CKAP2-204ENST00000459902 NR3C2P08235 984 aa12.26□□□□□ -0.45
CKAP2-204ENST00000459902 WASF2Q9Y6W5 498 aa12.26□□□□□ -0.45
CKAP2-204ENST00000459902 SMPD1P17405 629 aa12.25□□□□□ -0.45
CKAP2-204ENST00000459902 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
CKAP2-204ENST00000459902 PLPP7Q8NBV4 271 aa12.25□□□□□ -0.45
CKAP2-204ENST00000459902 ERVH48-1M5A8F1 160 aa12.24□□□□□ -0.45
CKAP2-204ENST00000459902 CCDC116Q8IYX3 515 aa12.24□□□□□ -0.45
CKAP2-204ENST00000459902 NNTQ13423 1086 aa12.23□□□□□ -0.45
CKAP2-204ENST00000459902 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
CKAP2-204ENST00000459902 TRAF7Q6Q0C0 670 aa12.23□□□□□ -0.45
CKAP2-204ENST00000459902 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
CKAP2-204ENST00000459902 CDCA7Q9BWT1 371 aaPredicted RBP12.23□□□□□ -0.45
CKAP2-204ENST00000459902 MAFBQ9Y5Q3 323 aaPredicted RBP12.23□□□□□ -0.45
CKAP2-204ENST00000459902 RFX1P22670 979 aa12.22□□□□□ -0.45
CKAP2-204ENST00000459902 LMOD1P29536 600 aaPredicted RBP12.22□□□□□ -0.45
CKAP2-204ENST00000459902 TMPRSS4Q9NRS4 437 aa12.22□□□□□ -0.45
CKAP2-204ENST00000459902 DOLKQ9UPQ8 538 aa12.22□□□□□ -0.45
CKAP2-204ENST00000459902 PCDHB11Q9Y5F2 797 aa12.22□□□□□ -0.45
CKAP2-204ENST00000459902 USP17L5A8MUK1 530 aa12.21□□□□□ -0.45
CKAP2-204ENST00000459902 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.45
CKAP2-204ENST00000459902 PPP1R26Q5T8A7 1209 aaPredicted RBP12.21□□□□□ -0.45
CKAP2-204ENST00000459902 DEPDC4Q8N2C3 294 aa12.21□□□□□ -0.45
CKAP2-204ENST00000459902 PLEKHM2Q8IWE5 1019 aa12.19□□□□□ -0.46
CKAP2-204ENST00000459902 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 GFRA3O60609 400 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 NCOA4Q13772 614 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 HPS1Q92902 700 aa12.18□□□□□ -0.46
CKAP2-204ENST00000459902 KLF16Q9BXK1 252 aaPredicted RBP12.18□□□□□ -0.46
CKAP2-204ENST00000459902 LZTS3O60299 673 aaPredicted RBP12.17□□□□□ -0.46
CKAP2-204ENST00000459902 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
CKAP2-204ENST00000459902 SCTRP47872 440 aa12.16□□□□□ -0.46
CKAP2-204ENST00000459902 ZNF784Q8NCA9 323 aaPredicted RBP12.16□□□□□ -0.46
CKAP2-204ENST00000459902 SRPK2P78362 688 aaKnown RBP12.15□□□□□ -0.46
CKAP2-204ENST00000459902 EML3Q32P44 896 aa12.15□□□□□ -0.46
CKAP2-204ENST00000459902 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
CKAP2-204ENST00000459902 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
CKAP2-204ENST00000459902 FAM187AA6NFU0 413 aa12.14□□□□□ -0.47
CKAP2-204ENST00000459902 LILRA1O75019 489 aa12.14□□□□□ -0.47
CKAP2-204ENST00000459902 ERVK-9P63128 1117 aa12.14□□□□□ -0.47
CKAP2-204ENST00000459902 USP4Q13107 963 aa12.14□□□□□ -0.47
CKAP2-204ENST00000459902 KANK4Q5T7N3 995 aaPredicted RBP12.14□□□□□ -0.47
CKAP2-204ENST00000459902 ITPKCQ96DU7 683 aa12.14□□□□□ -0.47
CKAP2-204ENST00000459902 MKRN1Q9UHC7 482 aaKnown RBP12.14□□□□□ -0.47
CKAP2-204ENST00000459902 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.13□□□□□ -0.47
CKAP2-204ENST00000459902 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
CKAP2-204ENST00000459902 TIMP2P16035 220 aa12.13□□□□□ -0.47
CKAP2-204ENST00000459902 WDR4P57081 412 aaKnown RBP12.13□□□□□ -0.47
CKAP2-204ENST00000459902 MYT1Q01538 1121 aa12.13□□□□□ -0.47
CKAP2-204ENST00000459902 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
CKAP2-204ENST00000459902 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
CKAP2-204ENST00000459902 ZIC2O95409 532 aaPredicted RBP12.12□□□□□ -0.47
CKAP2-204ENST00000459902 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
CKAP2-204ENST00000459902 ZFAND3Q9H8U3 227 aa12.12□□□□□ -0.47
CKAP2-204ENST00000459902 VRTNQ9H8Y1 702 aa12.12□□□□□ -0.47
CKAP2-204ENST00000459902 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
CKAP2-204ENST00000459902 NOD1Q9Y239 953 aa12.11□□□□□ -0.47
CKAP2-204ENST00000459902 MYCP01106 439 aaPredicted RBP12.1□□□□□ -0.47
CKAP2-204ENST00000459902 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms