RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 SMARCE1Q969G3 411 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 ALDH1L2Q3SY69 923 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 ERICH2A1L162 156 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 SYNJ2O15056 1496 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 DYNC1I1O14576 645 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 JMYQ8N9B5 988 aa13.56□□□□□ -0.24
TRAPPC10-204ENST00000459741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 PTPN23Q9H3S7 1636 aa13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 ERLIN1O75477 346 aa13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 CBFA2T2O43439 604 aa13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 TMEM57Q8N5G2 664 aa13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 EIF3JO75822 258 aaKnown RBP13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 CCDC183Q5T5S1 534 aa13.55□□□□□ -0.24
TRAPPC10-204ENST00000459741 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 FCHSD2O94868 740 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 STK38Q15208 465 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 H0YHG0 523 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 CALRP27797 417 aaKnown RBP13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 CEP57L1Q8IYX8 460 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 FOSBP53539 338 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 CFAP45Q9UL16 551 aa13.54□□□□□ -0.24
TRAPPC10-204ENST00000459741 ATF3P18847 181 aa13.53□□□□□ -0.24
TRAPPC10-204ENST00000459741 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
TRAPPC10-204ENST00000459741 TMEM132EQ6IEE7 984 aa13.53□□□□□ -0.24
TRAPPC10-204ENST00000459741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC10-204ENST00000459741 XBP1P17861 261 aa13.52□□□□□ -0.24
TRAPPC10-204ENST00000459741 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.24
TRAPPC10-204ENST00000459741 CAGE1Q8TC20 777 aa13.52□□□□□ -0.24
TRAPPC10-204ENST00000459741 DACH1Q9UI36 760 aa13.52□□□□□ -0.24
TRAPPC10-204ENST00000459741 SPATA32Q96LK8 384 aa13.52□□□□□ -0.24
TRAPPC10-204ENST00000459741 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.25
TRAPPC10-204ENST00000459741 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.25
TRAPPC10-204ENST00000459741 PATL2C9JE40 543 aaKnown RBP13.52□□□□□ -0.25
TRAPPC10-204ENST00000459741 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
TRAPPC10-204ENST00000459741 TMPOP42166 694 aaKnown RBP13.52□□□□□ -0.25
TRAPPC10-204ENST00000459741 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
TRAPPC10-204ENST00000459741 UVSSAQ2YD98 709 aa13.52□□□□□ -0.25
TRAPPC10-204ENST00000459741 SSFA2P28290 1259 aa13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 SKAP1Q86WV1 359 aa13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 PDRG1Q9NUG6 133 aa13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 RAPGEF4Q8WZA2 1011 aa13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 SERPINC1P01008 464 aa13.51□□□□□ -0.25
TRAPPC10-204ENST00000459741 FYB1O15117 783 aa13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 RIC3Q7Z5B4 369 aa13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 PRG4Q92954 1404 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 ATAD2Q6PL18 1390 aa13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 RPGRIP1LQ68CZ1 1315 aa13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 HMGXB3Q12766 1538 aa13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 CT47A1Q5JQC4 288 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 MPNDQ8N594 471 aa13.5□□□□□ -0.25
TRAPPC10-204ENST00000459741 NEMFO60524 1076 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 KRT32Q14532 448 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 SMTNL1A8MU46 457 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 USP8P40818 1118 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 WASHC4Q2M389 1173 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 ODF2Q5BJF6 829 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 ME1P48163 572 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 UBXN4Q92575 508 aa13.49□□□□□ -0.25
TRAPPC10-204ENST00000459741 SSH1Q8WYL5 1049 aa13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 PTPN14Q15678 1187 aa13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 NEUROD6Q96NK8 337 aa13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 CALCOCO1Q9P1Z2 691 aa13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 SCAND2PQ9GZW5 306 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 ABCC5O15440 1437 aa13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
TRAPPC10-204ENST00000459741 NAP1L1P55209 391 aaKnown RBP13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 TMCO3Q6UWJ1 677 aa13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 PPFIBP1Q86W92 1011 aa13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 UPF3BQ9BZI7 483 aaKnown RBP13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 IKQ13123 557 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 MYO6Q9UM54 1294 aa13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 SART3Q15020 963 aaKnown RBP13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 C8orf34Q49A92 452 aa13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 CCAR1Q8IX12 1150 aaKnown RBP13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
TRAPPC10-204ENST00000459741 CBX1P83916 185 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms