RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 NMRK2Q9NPI5 230 aa6.21□□□□□ -1.42
RGPD6-206ENST00000459645 ATP7BP35670 1465 aa6.21□□□□□ -1.42
RGPD6-206ENST00000459645 WDR90Q96KV7 1748 aa6.2□□□□□ -1.42
RGPD6-206ENST00000459645 FMN2Q9NZ56 1722 aa6.2□□□□□ -1.42
RGPD6-206ENST00000459645 VGFO15240 615 aaPredicted RBP6.2□□□□□ -1.42
RGPD6-206ENST00000459645 PHRF1Q9P1Y6 1649 aaKnown RBP6.19□□□□□ -1.42
RGPD6-206ENST00000459645 CDK11BP21127 795 aaKnown RBP6.19□□□□□ -1.42
RGPD6-206ENST00000459645 ACIN1Q9UKV3 1341 aaKnown RBP6.19□□□□□ -1.42
RGPD6-206ENST00000459645 NUP155O75694 1391 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 PAK3O75914 559 aaPredicted RBP6.18□□□□□ -1.42
RGPD6-206ENST00000459645 HSP90B1P14625 803 aaKnown RBP6.18□□□□□ -1.42
RGPD6-206ENST00000459645 DDB1Q16531 1140 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 NUTM2GQ5VZR2 741 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 TMEM132EQ6IEE7 984 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 RBM46Q8TBY0 533 aaKnown RBP6.18□□□□□ -1.42
RGPD6-206ENST00000459645 SLC16A10Q8TF71 515 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 LRRC4BQ9NT99 713 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 THRAP3Q9Y2W1 955 aaKnown RBP6.18□□□□□ -1.42
RGPD6-206ENST00000459645 PNPLA7Q6ZV29 1317 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 TNRC18O15417 2968 aaPredicted RBP6.18□□□□□ -1.42
RGPD6-206ENST00000459645 ABCC11Q96J66 1382 aa6.18□□□□□ -1.42
RGPD6-206ENST00000459645 TRPM3Q9HCF6 1732 aaPredicted RBP6.17□□□□□ -1.42
RGPD6-206ENST00000459645 MSH5O43196 834 aa6.17□□□□□ -1.42
RGPD6-206ENST00000459645 MLLT1Q03111 559 aaPredicted RBP6.17□□□□□ -1.42
RGPD6-206ENST00000459645 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
RGPD6-206ENST00000459645 AKT1S1Q96B36 256 aa6.17□□□□□ -1.42
RGPD6-206ENST00000459645 PAPPAQ13219 1627 aa6.17□□□□□ -1.42
RGPD6-206ENST00000459645 GPRASP1Q5JY77 1395 aa6.17□□□□□ -1.42
RGPD6-206ENST00000459645 ALS2Q96Q42 1657 aa6.17□□□□□ -1.42
RGPD6-206ENST00000459645 SAFB2Q14151 953 aaKnown RBP eCLIP6.16□□□□□ -1.42
RGPD6-206ENST00000459645 ABHD8Q96I13 439 aa6.16□□□□□ -1.42
RGPD6-206ENST00000459645 ARID3AQ99856 593 aa6.16□□□□□ -1.42
RGPD6-206ENST00000459645 PARP4Q9UKK3 1724 aaKnown RBP6.16□□□□□ -1.42
RGPD6-206ENST00000459645 CRYBG1Q9Y4K1 1723 aa6.16□□□□□ -1.42
RGPD6-206ENST00000459645 BCL9O00512 1426 aa6.16□□□□□ -1.42
RGPD6-206ENST00000459645 TULP4Q9NRJ4 1543 aa6.15□□□□□ -1.42
RGPD6-206ENST00000459645 CLTCL1P53675 1640 aa6.15□□□□□ -1.42
RGPD6-206ENST00000459645 FOXN1O15353 648 aa6.15□□□□□ -1.42
RGPD6-206ENST00000459645 ZEB1P37275 1124 aaPredicted RBP6.15□□□□□ -1.42
RGPD6-206ENST00000459645 FSTL1Q12841 308 aa6.15□□□□□ -1.42
RGPD6-206ENST00000459645 MSL1Q68DK7 614 aa6.15□□□□□ -1.42
RGPD6-206ENST00000459645 ADGRF5Q8IZF2 1346 aa6.15□□□□□ -1.43
RGPD6-206ENST00000459645 PRR36Q9H6K5 1346 aa6.15□□□□□ -1.43
RGPD6-206ENST00000459645 LRRC37A3O60309 1634 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 SBF2Q86WG5 1849 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 KCNQ4P56696 695 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 PLCB2Q00722 1185 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 ACSBG1Q96GR2 724 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 BCCIPQ9P287 314 aaKnown RBP eCLIP6.14□□□□□ -1.43
RGPD6-206ENST00000459645 CD2APQ9Y5K6 639 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 USP19O94966 1318 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 CLSPNQ9HAW4 1339 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 CRB1P82279 1406 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 COL5A2P05997 1499 aaPredicted RBP6.14□□□□□ -1.43
RGPD6-206ENST00000459645 TOPAZ1Q8N9V7 1692 aa6.14□□□□□ -1.43
RGPD6-206ENST00000459645 RGPD8O14715 1765 aaPredicted RBP6.13□□□□□ -1.43
RGPD6-206ENST00000459645 RGS19P49795 217 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 TMEM132AQ24JP5 1023 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 CNKSR2Q8WXI2 1034 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 TFCP2L1Q9NZI6 479 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 RPGRIP1LQ68CZ1 1315 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 IGSF1Q8N6C5 1336 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 CPDO75976 1380 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 ANKARQ7Z5J8 1434 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 VPS8Q8N3P4 1428 aa6.13□□□□□ -1.43
RGPD6-206ENST00000459645 FAM50AQ14320 339 aaKnown RBP6.12□□□□□ -1.43
RGPD6-206ENST00000459645 COL24A1Q17RW2 1714 aa6.12□□□□□ -1.43
RGPD6-206ENST00000459645 C16orf71Q8IYS4 520 aaPredicted RBP6.12□□□□□ -1.43
RGPD6-206ENST00000459645 ARHGEF28Q8N1W1 1705 aaKnown RBP6.12□□□□□ -1.43
RGPD6-206ENST00000459645 NGDNQ8NEJ9 315 aaKnown RBP6.12□□□□□ -1.43
RGPD6-206ENST00000459645 LMO7Q8WWI1 1683 aa6.12□□□□□ -1.43
RGPD6-206ENST00000459645 PRAM1Q96QH2 718 aa6.12□□□□□ -1.43
RGPD6-206ENST00000459645 HIRIP3Q9BW71 556 aaPredicted RBP6.12□□□□□ -1.43
RGPD6-206ENST00000459645 YTHDC2Q9H6S0 1430 aaKnown RBP6.12□□□□□ -1.43
RGPD6-206ENST00000459645 PRDM10Q9NQV6 1147 aa6.12□□□□□ -1.43
RGPD6-206ENST00000459645 FGD1P98174 961 aa6.11□□□□□ -1.43
RGPD6-206ENST00000459645 COL23A1Q86Y22 540 aaPredicted RBP6.11□□□□□ -1.43
RGPD6-206ENST00000459645 SIRT1Q96EB6 747 aa6.11□□□□□ -1.43
RGPD6-206ENST00000459645 PDE4DIPQ5VU43 2346 aa6.11□□□□□ -1.43
RGPD6-206ENST00000459645 IFT172Q9UG01 1749 aa6.11□□□□□ -1.43
RGPD6-206ENST00000459645 BRD4O60885 1362 aaPredicted RBP6.1□□□□□ -1.43
RGPD6-206ENST00000459645 ZBTB7CA1YPR0 619 aa6.1□□□□□ -1.43
RGPD6-206ENST00000459645 CCDC85CA6NKD9 419 aa6.1□□□□□ -1.43
RGPD6-206ENST00000459645 TOM1L2Q6ZVM7 507 aa6.1□□□□□ -1.43
RGPD6-206ENST00000459645 USP6P35125 1406 aa6.09□□□□□ -1.43
RGPD6-206ENST00000459645 ANKRD30BQ9BXX2 1392 aa6.09□□□□□ -1.43
RGPD6-206ENST00000459645 A0A0C4DFX4 3053 aa6.09□□□□□ -1.43
RGPD6-206ENST00000459645 LBX1P52954 281 aa6.09□□□□□ -1.43
RGPD6-206ENST00000459645 SMC1BQ8NDV3 1235 aa6.09□□□□□ -1.43
RGPD6-206ENST00000459645 RRAGCQ9HB90 399 aa6.09□□□□□ -1.43
RGPD6-206ENST00000459645 KIAA1210Q9ULL0 1709 aa6.08□□□□□ -1.44
RGPD6-206ENST00000459645 EXOC5O00471 708 aa6.08□□□□□ -1.44
RGPD6-206ENST00000459645 GCP02774 474 aa6.08□□□□□ -1.44
RGPD6-206ENST00000459645 CTCFP49711 727 aaPredicted RBP6.08□□□□□ -1.44
RGPD6-206ENST00000459645 SLC27A3Q5K4L6 730 aa6.08□□□□□ -1.44
RGPD6-206ENST00000459645 CDCA7Q9BWT1 371 aaPredicted RBP6.08□□□□□ -1.44
RGPD6-206ENST00000459645 MKRN1Q9UHC7 482 aaKnown RBP6.08□□□□□ -1.44
RGPD6-206ENST00000459645 AXIN2Q9Y2T1 843 aa6.08□□□□□ -1.44
RGPD6-206ENST00000459645 KCPQ6ZWJ8 1503 aa6.08□□□□□ -1.44
RGPD6-206ENST00000459645 CICQ96RK0 1608 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms