RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 CCDC24Q8N4L8 307 aa6.74□□□□□ -1.33
RFX3-AS1-203ENST00000457566 PRPF38BQ5VTL8 546 aaKnown RBP6.73□□□□□ -1.33
RFX3-AS1-203ENST00000457566 ADAMTS19Q8TE59 1207 aa6.73□□□□□ -1.33
RFX3-AS1-203ENST00000457566 RBM47A0AV96 593 aaKnown RBP6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 AP1G2O75843 785 aa6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 USP17L8P0C7I0 530 aa6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 CD46P15529 392 aa6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 ERCC3P19447 782 aa6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 RFX1P22670 979 aa6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 SOX11P35716 441 aa6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 GJD4Q96KN9 370 aaPredicted RBP6.72□□□□□ -1.33
RFX3-AS1-203ENST00000457566 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
RFX3-AS1-203ENST00000457566 H3BM21 787 aa6.71□□□□□ -1.34
RFX3-AS1-203ENST00000457566 HSP90B1P14625 803 aaKnown RBP6.71□□□□□ -1.34
RFX3-AS1-203ENST00000457566 TRIM46Q7Z4K8 759 aa6.71□□□□□ -1.34
RFX3-AS1-203ENST00000457566 PUS7Q96PZ0 661 aaKnown RBP6.71□□□□□ -1.34
RFX3-AS1-203ENST00000457566 ALG2Q9H553 416 aa6.71□□□□□ -1.34
RFX3-AS1-203ENST00000457566 IGSF5Q9NSI5 407 aa6.71□□□□□ -1.34
RFX3-AS1-203ENST00000457566 PALM3A6NDB9 673 aaPredicted RBP6.7□□□□□ -1.34
RFX3-AS1-203ENST00000457566 CAPN5O15484 640 aaPredicted RBP6.7□□□□□ -1.34
RFX3-AS1-203ENST00000457566 SIAH2O43255 324 aa6.7□□□□□ -1.34
RFX3-AS1-203ENST00000457566 KDM4AO75164 1064 aa6.7□□□□□ -1.34
RFX3-AS1-203ENST00000457566 USP46P62068 366 aa6.7□□□□□ -1.34
RFX3-AS1-203ENST00000457566 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
RFX3-AS1-203ENST00000457566 WASF2Q9Y6W5 498 aa6.7□□□□□ -1.34
RFX3-AS1-203ENST00000457566 BMP1P13497 986 aa6.69□□□□□ -1.34
RFX3-AS1-203ENST00000457566 QPCTQ16769 361 aa6.69□□□□□ -1.34
RFX3-AS1-203ENST00000457566 EHBP1Q8NDI1 1231 aa6.69□□□□□ -1.34
RFX3-AS1-203ENST00000457566 MOXD2PA6NHM9 499 aa6.68□□□□□ -1.34
RFX3-AS1-203ENST00000457566 LMOD1P29536 600 aaPredicted RBP6.68□□□□□ -1.34
RFX3-AS1-203ENST00000457566 RTL5Q5HYW3 569 aaPredicted RBP6.68□□□□□ -1.34
RFX3-AS1-203ENST00000457566 JUNDP17535 347 aa6.67□□□□□ -1.34
RFX3-AS1-203ENST00000457566 VEGFBP49765 207 aa6.67□□□□□ -1.34
RFX3-AS1-203ENST00000457566 ERBB4Q15303 1308 aa6.67□□□□□ -1.34
RFX3-AS1-203ENST00000457566 NUTM2BA6NNL0 878 aaPredicted RBP6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 NUTM2EB1AL46 878 aaPredicted RBP6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 ELOAQ14241 798 aaKnown RBP6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 NUTM2DQ5VT03 806 aaPredicted RBP6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 NUTM2AQ8IVF1 878 aaPredicted RBP6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 CCER1Q8TC90 406 aaPredicted RBP6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 ZBTB3Q9H5J0 574 aa6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 USP35Q9P2H5 1018 aa6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 PCDHB15Q9Y5E8 787 aa6.66□□□□□ -1.34
RFX3-AS1-203ENST00000457566 UNCXA6NJT0 531 aa6.65□□□□□ -1.34
RFX3-AS1-203ENST00000457566 GPR37L1O60883 481 aa6.65□□□□□ -1.34
RFX3-AS1-203ENST00000457566 SUZ12Q15022 739 aaKnown RBP6.65□□□□□ -1.34
RFX3-AS1-203ENST00000457566 CSPP1Q1MSJ5 1256 aa6.65□□□□□ -1.34
RFX3-AS1-203ENST00000457566 ZFP42Q96MM3 310 aa6.65□□□□□ -1.34
RFX3-AS1-203ENST00000457566 NUDT12Q9BQG2 462 aa6.65□□□□□ -1.34
RFX3-AS1-203ENST00000457566 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
RFX3-AS1-203ENST00000457566 HOXA2O43364 376 aa6.64□□□□□ -1.35
RFX3-AS1-203ENST00000457566 UCN2Q96RP3 112 aa6.64□□□□□ -1.35
RFX3-AS1-203ENST00000457566 TRIM34Q9BYJ4 488 aa6.64□□□□□ -1.35
RFX3-AS1-203ENST00000457566 CARNS1A5YM72 827 aa6.63□□□□□ -1.35
RFX3-AS1-203ENST00000457566 NDUFV2P19404 249 aa6.63□□□□□ -1.35
RFX3-AS1-203ENST00000457566 VAC14Q08AM6 782 aa6.63□□□□□ -1.35
RFX3-AS1-203ENST00000457566 PTCRAQ6ISU1 281 aaPredicted RBP6.63□□□□□ -1.35
RFX3-AS1-203ENST00000457566 TXNDC2Q86VQ3 553 aa6.63□□□□□ -1.35
RFX3-AS1-203ENST00000457566 HLA-CQ95604 372 aa6.63□□□□□ -1.35
RFX3-AS1-203ENST00000457566 MAFBQ9Y5Q3 323 aaPredicted RBP6.63□□□□□ -1.35
RFX3-AS1-203ENST00000457566 VSIG8P0DPA2 414 aa6.62□□□□□ -1.35
RFX3-AS1-203ENST00000457566 SH3BP2P78314 561 aa6.62□□□□□ -1.35
RFX3-AS1-203ENST00000457566 KCNMA1Q12791 1236 aa6.62□□□□□ -1.35
RFX3-AS1-203ENST00000457566 SCARF1Q14162 830 aa6.62□□□□□ -1.35
RFX3-AS1-203ENST00000457566 RETREG3Q86VR2 466 aa6.62□□□□□ -1.35
RFX3-AS1-203ENST00000457566 CDK11BP21127 795 aaKnown RBP6.61□□□□□ -1.35
RFX3-AS1-203ENST00000457566 PRR7Q8TB68 274 aa6.61□□□□□ -1.35
RFX3-AS1-203ENST00000457566 CABLES1Q8TDN4 633 aa6.61□□□□□ -1.35
RFX3-AS1-203ENST00000457566 SIRT1Q96EB6 747 aa6.61□□□□□ -1.35
RFX3-AS1-203ENST00000457566 CDK11AQ9UQ88 783 aaPredicted RBP6.61□□□□□ -1.35
RFX3-AS1-203ENST00000457566 ATP9BO43861 1147 aa6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 SEMA3FQ13275 785 aa6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 MRPL14Q6P1L8 145 aaKnown RBP6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 DNAJC14Q6Y2X3 702 aaPredicted RBP6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 MPNDQ8N594 471 aa6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 PNMA1Q8ND90 353 aa6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 SYMPKQ92797 1274 aaKnown RBP6.6□□□□□ -1.35
RFX3-AS1-203ENST00000457566 ARID4AP29374 1257 aaPredicted RBP6.59□□□□□ -1.35
RFX3-AS1-203ENST00000457566 CTDSPL2Q05D32 466 aa6.59□□□□□ -1.35
RFX3-AS1-203ENST00000457566 HMX1Q9NP08 348 aaPredicted RBP6.59□□□□□ -1.35
RFX3-AS1-203ENST00000457566 CCNYL3P0C7X3 344 aa6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 FDX1P10109 184 aa6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 GUCA2AQ02747 115 aa6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 NFATC2IPQ8NCF5 419 aa6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 MRRFQ96E11 262 aaKnown RBP6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 KIAA1522Q9P206 1035 aaPredicted RBP6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 PCDHGC3Q9UN70 934 aa6.58□□□□□ -1.36
RFX3-AS1-203ENST00000457566 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
RFX3-AS1-203ENST00000457566 EIF4G2P78344 907 aaKnown RBP eCLIP6.57□□□□□ -1.36
RFX3-AS1-203ENST00000457566 NNTQ13423 1086 aa6.57□□□□□ -1.36
RFX3-AS1-203ENST00000457566 KANK4Q5T7N3 995 aaPredicted RBP6.57□□□□□ -1.36
RFX3-AS1-203ENST00000457566 TBC1D9Q6ZT07 1266 aa6.57□□□□□ -1.36
RFX3-AS1-203ENST00000457566 PURBQ96QR8 312 aaKnown RBP6.57□□□□□ -1.36
RFX3-AS1-203ENST00000457566 UNC93B1Q9H1C4 597 aa6.57□□□□□ -1.36
RFX3-AS1-203ENST00000457566 ADH1CP00326 375 aa6.56□□□□□ -1.36
RFX3-AS1-203ENST00000457566 MTMR2Q13614 643 aa6.56□□□□□ -1.36
RFX3-AS1-203ENST00000457566 PTPRNQ16849 979 aa6.56□□□□□ -1.36
RFX3-AS1-203ENST00000457566 CDCA8Q53HL2 280 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms