RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
SMPD4-215ENST00000457039 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.68
SMPD4-215ENST00000457039 VPS72Q15906 364 aa19.33■□□□□ 0.68
SMPD4-215ENST00000457039 RRS1Q15050 365 aaKnown RBP19.32■□□□□ 0.68
SMPD4-215ENST00000457039 RTL1A6NKG5 1358 aa19.32■□□□□ 0.68
SMPD4-215ENST00000457039 DDX10Q13206 875 aaKnown RBP19.31■□□□□ 0.68
SMPD4-215ENST00000457039 IP6K1Q92551 441 aa19.31■□□□□ 0.68
SMPD4-215ENST00000457039 RGPD5Q99666 1765 aa19.3■□□□□ 0.68
SMPD4-215ENST00000457039 CC2D1BQ5T0F9 858 aaKnown RBP19.3■□□□□ 0.68
SMPD4-215ENST00000457039 MORC1Q86VD1 984 aa19.3■□□□□ 0.68
SMPD4-215ENST00000457039 GJD4Q96KN9 370 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-215ENST00000457039 BLMP54132 1417 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-215ENST00000457039 GLI3P10071 1580 aa19.3■□□□□ 0.68
SMPD4-215ENST00000457039 PEAK1Q9H792 1746 aa19.3■□□□□ 0.68
SMPD4-215ENST00000457039 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
SMPD4-215ENST00000457039 HOXC9P31274 260 aa19.29■□□□□ 0.68
SMPD4-215ENST00000457039 RBM6P78332 1123 aaKnown RBP19.29■□□□□ 0.68
SMPD4-215ENST00000457039 STRN4Q9NRL3 753 aa19.29■□□□□ 0.68
SMPD4-215ENST00000457039 SMG6Q86US8 1419 aaKnown RBP19.28■□□□□ 0.68
SMPD4-215ENST00000457039 LARP1Q6PKG0 1096 aaKnown RBP19.28■□□□□ 0.68
SMPD4-215ENST00000457039 POLKQ9UBT6 870 aa19.28■□□□□ 0.68
SMPD4-215ENST00000457039 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
SMPD4-215ENST00000457039 ERBB3P21860 1342 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 WDR17Q8IZU2 1322 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 RXRBP28702 533 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 TNNT2P45379 298 aaPredicted RBP19.27■□□□□ 0.68
SMPD4-215ENST00000457039 AMPHP49418 695 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 EVA1CP58658 441 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 FLT4P35916 1363 aa19.27■□□□□ 0.68
SMPD4-215ENST00000457039 SPATA31A1Q5TZJ5 1347 aa19.26■□□□□ 0.67
SMPD4-215ENST00000457039 MAP2P11137 1827 aaKnown RBP19.26■□□□□ 0.67
SMPD4-215ENST00000457039 CDK12Q9NYV4 1490 aaPredicted RBP19.26■□□□□ 0.67
SMPD4-215ENST00000457039 CRB1P82279 1406 aa19.25■□□□□ 0.67
SMPD4-215ENST00000457039 INSRP06213 1382 aa19.24■□□□□ 0.67
SMPD4-215ENST00000457039 HSP90AB2PQ58FF8 381 aa19.24■□□□□ 0.67
SMPD4-215ENST00000457039 ANKRD24Q8TF21 1146 aa19.24■□□□□ 0.67
SMPD4-215ENST00000457039 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
SMPD4-215ENST00000457039 ILDR2Q71H61 639 aa19.23■□□□□ 0.67
SMPD4-215ENST00000457039 CCDC9Q9Y3X0 531 aaKnown RBP19.23■□□□□ 0.67
SMPD4-215ENST00000457039 RGS12O14924 1447 aa19.22■□□□□ 0.67
SMPD4-215ENST00000457039 TOM1L2Q6ZVM7 507 aa19.21■□□□□ 0.67
SMPD4-215ENST00000457039 FAM208AQ9UK61 1670 aaKnown RBP19.2■□□□□ 0.66
SMPD4-215ENST00000457039 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
SMPD4-215ENST00000457039 PPM1GO15355 546 aaPredicted RBP19.2■□□□□ 0.66
SMPD4-215ENST00000457039 CSB-PGBD3P0DP91 1061 aa19.2■□□□□ 0.66
SMPD4-215ENST00000457039 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
SMPD4-215ENST00000457039 CARD10Q9BWT7 1032 aa19.2■□□□□ 0.66
SMPD4-215ENST00000457039 THRAP3Q9Y2W1 955 aaKnown RBP19.2■□□□□ 0.66
SMPD4-215ENST00000457039 BARGINQ6ZT62 677 aa19.19■□□□□ 0.66
SMPD4-215ENST00000457039 TCP11L2Q8N4U5 519 aa19.19■□□□□ 0.66
SMPD4-215ENST00000457039 LTV1Q96GA3 475 aaPredicted RBP19.19■□□□□ 0.66
SMPD4-215ENST00000457039 USP35Q9P2H5 1018 aa19.19■□□□□ 0.66
SMPD4-215ENST00000457039 THSD7AQ9UPZ6 1657 aa19.19■□□□□ 0.66
SMPD4-215ENST00000457039 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
SMPD4-215ENST00000457039 MTHFSP49914 203 aa19.17■□□□□ 0.66
SMPD4-215ENST00000457039 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
SMPD4-215ENST00000457039 DISP2A7MBM2 1401 aa19.16■□□□□ 0.66
SMPD4-215ENST00000457039 PPP2R1AP30153 589 aa19.15■□□□□ 0.66
SMPD4-215ENST00000457039 NBPF6Q5VWK0 638 aa19.15■□□□□ 0.66
SMPD4-215ENST00000457039 SEPT12Q8IYM1 358 aa19.15■□□□□ 0.66
SMPD4-215ENST00000457039 NBPF4Q96M43 638 aa19.15■□□□□ 0.66
SMPD4-215ENST00000457039 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
SMPD4-215ENST00000457039 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.66
SMPD4-215ENST00000457039 EIF4A2Q14240 407 aaKnown RBP19.14■□□□□ 0.65
SMPD4-215ENST00000457039 NCAPD2Q15021 1401 aa19.14■□□□□ 0.65
SMPD4-215ENST00000457039 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
SMPD4-215ENST00000457039 PARP4Q9UKK3 1724 aaKnown RBP19.12■□□□□ 0.65
SMPD4-215ENST00000457039 RALBP1Q15311 655 aa19.12■□□□□ 0.65
SMPD4-215ENST00000457039 CDCA7Q9BWT1 371 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-215ENST00000457039 BRWD3Q6RI45 1802 aa19.1■□□□□ 0.65
SMPD4-215ENST00000457039 IL13P35225 146 aa19.1■□□□□ 0.65
SMPD4-215ENST00000457039 EYA1Q99502 592 aa19.1■□□□□ 0.65
SMPD4-215ENST00000457039 IGSF1Q8N6C5 1336 aa19.09■□□□□ 0.65
SMPD4-215ENST00000457039 LRRC37A3O60309 1634 aa19.09■□□□□ 0.65
SMPD4-215ENST00000457039 RGPD1P0DJD0 1748 aa19.08■□□□□ 0.65
SMPD4-215ENST00000457039 IL2RBP14784 551 aa19.08■□□□□ 0.64
SMPD4-215ENST00000457039 USHBP1Q8N6Y0 703 aa19.08■□□□□ 0.64
SMPD4-215ENST00000457039 PRKRIP1Q9H875 184 aaPredicted RBP19.08■□□□□ 0.64
SMPD4-215ENST00000457039 MEGF6O75095 1541 aa19.07■□□□□ 0.64
SMPD4-215ENST00000457039 A0A0G2JS52 829 aa19.07■□□□□ 0.64
SMPD4-215ENST00000457039 MYT1Q01538 1121 aa19.07■□□□□ 0.64
SMPD4-215ENST00000457039 KRT27Q7Z3Y8 459 aa19.06■□□□□ 0.64
SMPD4-215ENST00000457039 DIAPH1O60610 1272 aaKnown RBP19.05■□□□□ 0.64
SMPD4-215ENST00000457039 OVOS2A0A0G2JMS6 1433 aa19.05■□□□□ 0.64
SMPD4-215ENST00000457039 TNS2Q63HR2 1409 aa19.05■□□□□ 0.64
SMPD4-215ENST00000457039 MYBBP1AQ9BQG0 1328 aaKnown RBP19.04■□□□□ 0.64
SMPD4-215ENST00000457039 DDB1Q16531 1140 aa19.04■□□□□ 0.64
SMPD4-215ENST00000457039 KDRP35968 1356 aa19.04■□□□□ 0.64
SMPD4-215ENST00000457039 EP400Q96L91 3159 aa19.03■□□□□ 0.64
SMPD4-215ENST00000457039 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
SMPD4-215ENST00000457039 EXOC5O00471 708 aa19.01■□□□□ 0.63
SMPD4-215ENST00000457039 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
SMPD4-215ENST00000457039 AEBP1Q8IUX7 1158 aa19.01■□□□□ 0.63
SMPD4-215ENST00000457039 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
SMPD4-215ENST00000457039 PLEKHG2Q9H7P9 1386 aa19.01■□□□□ 0.63
SMPD4-215ENST00000457039 SHANK3Q9BYB0 1731 aa19■□□□□ 0.63
SMPD4-215ENST00000457039 TATP17735 454 aaPredicted RBP19■□□□□ 0.63
SMPD4-215ENST00000457039 SULT6B1Q6IMI4 303 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms