RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 BCL9O00512 1426 aa17.81■□□□□ 0.44
DDX39B-213ENST00000456976 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
DDX39B-213ENST00000456976 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
DDX39B-213ENST00000456976 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
DDX39B-213ENST00000456976 DNAJC5GQ8N7S2 189 aa17.81■□□□□ 0.44
DDX39B-213ENST00000456976 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
DDX39B-213ENST00000456976 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
DDX39B-213ENST00000456976 TOM1L2Q6ZVM7 507 aa17.8■□□□□ 0.44
DDX39B-213ENST00000456976 PEAK1Q9H792 1746 aa17.8■□□□□ 0.44
DDX39B-213ENST00000456976 SLC34A2O95436 690 aa17.78■□□□□ 0.44
DDX39B-213ENST00000456976 SPATA31E1Q6ZUB1 1445 aa17.78■□□□□ 0.44
DDX39B-213ENST00000456976 EXOC5O00471 708 aa17.77■□□□□ 0.44
DDX39B-213ENST00000456976 GCP02774 474 aa17.77■□□□□ 0.44
DDX39B-213ENST00000456976 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
DDX39B-213ENST00000456976 COL5A2P05997 1499 aaPredicted RBP17.76■□□□□ 0.43
DDX39B-213ENST00000456976 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
DDX39B-213ENST00000456976 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
DDX39B-213ENST00000456976 TULP4Q9NRJ4 1543 aa17.76■□□□□ 0.43
DDX39B-213ENST00000456976 SBF2Q86WG5 1849 aa17.75■□□□□ 0.43
DDX39B-213ENST00000456976 NUDT16Q96DE0 195 aaKnown RBP17.75■□□□□ 0.43
DDX39B-213ENST00000456976 ZNF827Q17R98 1081 aa17.74■□□□□ 0.43
DDX39B-213ENST00000456976 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
DDX39B-213ENST00000456976 KIF3CO14782 793 aa17.72■□□□□ 0.43
DDX39B-213ENST00000456976 USP19O94966 1318 aa17.72■□□□□ 0.43
DDX39B-213ENST00000456976 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
DDX39B-213ENST00000456976 LMO7Q8WWI1 1683 aa17.7■□□□□ 0.42
DDX39B-213ENST00000456976 ACEP12821 1306 aa17.7■□□□□ 0.42
DDX39B-213ENST00000456976 ADCY9O60503 1353 aa17.69■□□□□ 0.42
DDX39B-213ENST00000456976 TOMM70O94826 608 aa17.69■□□□□ 0.42
DDX39B-213ENST00000456976 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
DDX39B-213ENST00000456976 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
DDX39B-213ENST00000456976 PCDH10Q9P2E7 1040 aa17.69■□□□□ 0.42
DDX39B-213ENST00000456976 LRRC37A3O60309 1634 aa17.68■□□□□ 0.42
DDX39B-213ENST00000456976 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
DDX39B-213ENST00000456976 KLRG1Q96E93 195 aa17.67■□□□□ 0.42
DDX39B-213ENST00000456976 LRRC4BQ9NT99 713 aa17.67■□□□□ 0.42
DDX39B-213ENST00000456976 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
DDX39B-213ENST00000456976 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
DDX39B-213ENST00000456976 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
DDX39B-213ENST00000456976 PNPLA7Q6ZV29 1317 aa17.66■□□□□ 0.42
DDX39B-213ENST00000456976 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
DDX39B-213ENST00000456976 PLEKHG3A1L390 1219 aa17.65■□□□□ 0.42
DDX39B-213ENST00000456976 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
DDX39B-213ENST00000456976 SLC27A3Q5K4L6 730 aa17.65■□□□□ 0.42
DDX39B-213ENST00000456976 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
DDX39B-213ENST00000456976 CDK19Q9BWU1 502 aa17.64■□□□□ 0.41
DDX39B-213ENST00000456976 CD2APQ9Y5K6 639 aa17.64■□□□□ 0.41
DDX39B-213ENST00000456976 MSH5O43196 834 aa17.63■□□□□ 0.41
DDX39B-213ENST00000456976 WWC3Q9ULE0 1092 aa17.63■□□□□ 0.41
DDX39B-213ENST00000456976 NLRP6P59044 892 aa17.62■□□□□ 0.41
DDX39B-213ENST00000456976 USP6P35125 1406 aa17.62■□□□□ 0.41
DDX39B-213ENST00000456976 MPHOSPH9Q99550 1183 aa17.61■□□□□ 0.41
DDX39B-213ENST00000456976 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
DDX39B-213ENST00000456976 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
DDX39B-213ENST00000456976 PAPPAQ13219 1627 aa17.59■□□□□ 0.41
DDX39B-213ENST00000456976 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
DDX39B-213ENST00000456976 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
DDX39B-213ENST00000456976 ADGRB1O14514 1584 aa17.56■□□□□ 0.4
DDX39B-213ENST00000456976 HTRA3P83110 453 aa17.55■□□□□ 0.4
DDX39B-213ENST00000456976 C16orf71Q8IYS4 520 aaPredicted RBP17.55■□□□□ 0.4
DDX39B-213ENST00000456976 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
DDX39B-213ENST00000456976 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
DDX39B-213ENST00000456976 TNS2Q63HR2 1409 aa17.54■□□□□ 0.4
DDX39B-213ENST00000456976 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
DDX39B-213ENST00000456976 FSTL1Q12841 308 aa17.52■□□□□ 0.4
DDX39B-213ENST00000456976 ARHGEF25Q86VW2 580 aa17.52■□□□□ 0.4
DDX39B-213ENST00000456976 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.4
DDX39B-213ENST00000456976 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.39
DDX39B-213ENST00000456976 NHSQ6T4R5 1651 aa17.52■□□□□ 0.39
DDX39B-213ENST00000456976 KCNQ4P56696 695 aa17.51■□□□□ 0.39
DDX39B-213ENST00000456976 KCNH5Q8NCM2 988 aa17.51■□□□□ 0.39
DDX39B-213ENST00000456976 PCNTO95613 3336 aa17.51■□□□□ 0.39
DDX39B-213ENST00000456976 IGSF1Q8N6C5 1336 aa17.49■□□□□ 0.39
DDX39B-213ENST00000456976 IL2RBP14784 551 aa17.49■□□□□ 0.39
DDX39B-213ENST00000456976 PPIP5K1Q6PFW1 1433 aa17.48■□□□□ 0.39
DDX39B-213ENST00000456976 HSPA1AP0DMV8 641 aaKnown RBP17.48■□□□□ 0.39
DDX39B-213ENST00000456976 HSPA1BP0DMV9 641 aaKnown RBP17.48■□□□□ 0.39
DDX39B-213ENST00000456976 NMRK2Q9NPI5 230 aa17.48■□□□□ 0.39
DDX39B-213ENST00000456976 KDM2AQ9Y2K7 1162 aa17.48■□□□□ 0.39
DDX39B-213ENST00000456976 HMGB2P26583 209 aaKnown RBP17.47■□□□□ 0.39
DDX39B-213ENST00000456976 FLAD1Q8NFF5 587 aa17.47■□□□□ 0.39
DDX39B-213ENST00000456976 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
DDX39B-213ENST00000456976 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
DDX39B-213ENST00000456976 SRPK2P78362 688 aaKnown RBP17.46■□□□□ 0.39
DDX39B-213ENST00000456976 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
DDX39B-213ENST00000456976 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
DDX39B-213ENST00000456976 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
DDX39B-213ENST00000456976 SOX12O15370 315 aa17.45■□□□□ 0.38
DDX39B-213ENST00000456976 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
DDX39B-213ENST00000456976 SLIT3O75094 1523 aa17.44■□□□□ 0.38
DDX39B-213ENST00000456976 WNK3Q9BYP7 1800 aa17.44■□□□□ 0.38
DDX39B-213ENST00000456976 BTAF1O14981 1849 aa17.43■□□□□ 0.38
DDX39B-213ENST00000456976 DDX54Q8TDD1 881 aaKnown RBP17.43■□□□□ 0.38
DDX39B-213ENST00000456976 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
DDX39B-213ENST00000456976 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
DDX39B-213ENST00000456976 ABCC6O95255 1503 aa17.42■□□□□ 0.38
DDX39B-213ENST00000456976 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
DDX39B-213ENST00000456976 COL18A1P39060 1754 aa17.42■□□□□ 0.38
DDX39B-213ENST00000456976 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
DDX39B-213ENST00000456976 CABP1Q9NZU7 370 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms