RNA–Protein interactions for RNA: ENST00000456515.5

SEC22C-214, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-214ENST00000456515 CPDO75976 1380 aa10.12□□□□□ -0.79
SEC22C-214ENST00000456515 PHRF1Q9P1Y6 1649 aaKnown RBP10.11□□□□□ -0.79
SEC22C-214ENST00000456515 NWD2Q9ULI1 1742 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 GLI3P10071 1580 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 OVOS2A0A0J9YW53 1432 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 OVOS2Q6IE36 1432 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 BRWD3Q6RI45 1802 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 SLIT3O75094 1523 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 KIAA0232Q92628 1395 aa10.11□□□□□ -0.79
SEC22C-214ENST00000456515 ABCA3Q99758 1704 aa10.1□□□□□ -0.79
SEC22C-214ENST00000456515 USP54Q70EL1 1684 aa10.1□□□□□ -0.79
SEC22C-214ENST00000456515 AMPHP49418 695 aa10.1□□□□□ -0.79
SEC22C-214ENST00000456515 EVA1CP58658 441 aa10.1□□□□□ -0.79
SEC22C-214ENST00000456515 KRT27Q7Z3Y8 459 aa10.1□□□□□ -0.79
SEC22C-214ENST00000456515 NPC1L1Q9UHC9 1359 aa10.1□□□□□ -0.79
SEC22C-214ENST00000456515 COL14A1Q05707 1796 aaKnown RBP10.09□□□□□ -0.79
SEC22C-214ENST00000456515 PER1O15534 1290 aaPredicted RBP10.09□□□□□ -0.79
SEC22C-214ENST00000456515 FAM98CQ17RN3 349 aaKnown RBP10.09□□□□□ -0.79
SEC22C-214ENST00000456515 AMER1Q5JTC6 1135 aaPredicted RBP10.09□□□□□ -0.79
SEC22C-214ENST00000456515 ARHGEF25Q86VW2 580 aa10.09□□□□□ -0.79
SEC22C-214ENST00000456515 CRYBG1Q9Y4K1 1723 aa10.09□□□□□ -0.79
SEC22C-214ENST00000456515 AATKQ6ZMQ8 1374 aa10.09□□□□□ -0.79
SEC22C-214ENST00000456515 PLCH1Q4KWH8 1693 aa10.09□□□□□ -0.79
SEC22C-214ENST00000456515 SPATA31A5Q5VU36 1347 aa10.08□□□□□ -0.8
SEC22C-214ENST00000456515 SPATA31A7Q8IWB4 1347 aa10.08□□□□□ -0.8
SEC22C-214ENST00000456515 ANKRD26Q9UPS8 1709 aa10.08□□□□□ -0.8
SEC22C-214ENST00000456515 CHRNA2Q15822 529 aa10.08□□□□□ -0.8
SEC22C-214ENST00000456515 CC2D1BQ5T0F9 858 aaKnown RBP10.08□□□□□ -0.8
SEC22C-214ENST00000456515 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
SEC22C-214ENST00000456515 CSB-PGBD3P0DP91 1061 aa10.07□□□□□ -0.8
SEC22C-214ENST00000456515 TNNT2P45379 298 aaPredicted RBP10.07□□□□□ -0.8
SEC22C-214ENST00000456515 CNGB1Q14028 1251 aaPredicted RBP10.07□□□□□ -0.8
SEC22C-214ENST00000456515 IP6K1Q92551 441 aa10.07□□□□□ -0.8
SEC22C-214ENST00000456515 RTL1A6NKG5 1358 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 A0A0G2JS52 829 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 PPM1GO15355 546 aaPredicted RBP10.06□□□□□ -0.8
SEC22C-214ENST00000456515 MYT1Q01538 1121 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 STRN4Q9NRL3 753 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 NFAT5O94916 1531 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 ABCC6O95255 1503 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 SPATA31A1Q5TZJ5 1347 aa10.06□□□□□ -0.8
SEC22C-214ENST00000456515 SF3B2Q13435 895 aaKnown RBP10.05□□□□□ -0.8
SEC22C-214ENST00000456515 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
SEC22C-214ENST00000456515 LTN1O94822 1766 aa10.05□□□□□ -0.8
SEC22C-214ENST00000456515 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
SEC22C-214ENST00000456515 SMG6Q86US8 1419 aaKnown RBP10.05□□□□□ -0.8
SEC22C-214ENST00000456515 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
SEC22C-214ENST00000456515 NRAPQ86VF7 1730 aa10.04□□□□□ -0.8
SEC22C-214ENST00000456515 FLT4P35916 1363 aa10.04□□□□□ -0.8
SEC22C-214ENST00000456515 HOXC9P31274 260 aa10.04□□□□□ -0.8
SEC22C-214ENST00000456515 RALBP1Q15311 655 aa10.04□□□□□ -0.8
SEC22C-214ENST00000456515 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
SEC22C-214ENST00000456515 MAP2P11137 1827 aaKnown RBP10.04□□□□□ -0.8
SEC22C-214ENST00000456515 SRCAPQ6ZRS2 3230 aa10.03□□□□□ -0.8
SEC22C-214ENST00000456515 TOM1L2Q6ZVM7 507 aa10.03□□□□□ -0.8
SEC22C-214ENST00000456515 CFAP53Q96M91 514 aa10.03□□□□□ -0.8
SEC22C-214ENST00000456515 USP35Q9P2H5 1018 aa10.03□□□□□ -0.8
SEC22C-214ENST00000456515 POLKQ9UBT6 870 aa10.03□□□□□ -0.8
SEC22C-214ENST00000456515 LARP1Q6PKG0 1096 aaKnown RBP10.02□□□□□ -0.81
SEC22C-214ENST00000456515 BARGINQ6ZT62 677 aa10.02□□□□□ -0.81
SEC22C-214ENST00000456515 ANKRD24Q8TF21 1146 aa10.02□□□□□ -0.81
SEC22C-214ENST00000456515 LTV1Q96GA3 475 aaPredicted RBP10.02□□□□□ -0.81
SEC22C-214ENST00000456515 NLRP2Q9NX02 1062 aa10.02□□□□□ -0.81
SEC22C-214ENST00000456515 EMILIN1Q9Y6C2 1016 aa10.02□□□□□ -0.81
SEC22C-214ENST00000456515 CAMTA1Q9Y6Y1 1673 aa10.02□□□□□ -0.81
SEC22C-214ENST00000456515 WDR17Q8IZU2 1322 aa10.02□□□□□ -0.81
SEC22C-214ENST00000456515 INSRP06213 1382 aa10.01□□□□□ -0.81
SEC22C-214ENST00000456515 ANP32CO43423 234 aa10.01□□□□□ -0.81
SEC22C-214ENST00000456515 FBLN1P23142 703 aa10.01□□□□□ -0.81
SEC22C-214ENST00000456515 AXIN2Q9Y2T1 843 aa10.01□□□□□ -0.81
SEC22C-214ENST00000456515 THRAP3Q9Y2W1 955 aaKnown RBP10.01□□□□□ -0.81
SEC22C-214ENST00000456515 COL5A2P05997 1499 aaPredicted RBP10.01□□□□□ -0.81
SEC22C-214ENST00000456515 LMO7Q8WWI1 1683 aa10.01□□□□□ -0.81
SEC22C-214ENST00000456515 COL18A1P39060 1754 aa10.01□□□□□ -0.81
SEC22C-214ENST00000456515 CRB1P82279 1406 aa10□□□□□ -0.81
SEC22C-214ENST00000456515 MTHFSP49914 203 aa10□□□□□ -0.81
SEC22C-214ENST00000456515 HSP90AB2PQ58FF8 381 aa10□□□□□ -0.81
SEC22C-214ENST00000456515 FAM196AQ6ZSG2 479 aa10□□□□□ -0.81
SEC22C-214ENST00000456515 TCP11L2Q8N4U5 519 aa10□□□□□ -0.81
SEC22C-214ENST00000456515 CDCA7Q9BWT1 371 aaPredicted RBP10□□□□□ -0.81
SEC22C-214ENST00000456515 CARD10Q9BWT7 1032 aa10□□□□□ -0.81
SEC22C-214ENST00000456515 ERBB3P21860 1342 aa10□□□□□ -0.81
SEC22C-214ENST00000456515 RGPD5Q99666 1765 aa9.99□□□□□ -0.81
SEC22C-214ENST00000456515 PPP2R1AP30153 589 aa9.99□□□□□ -0.81
SEC22C-214ENST00000456515 BAG6P46379 1132 aa9.99□□□□□ -0.81
SEC22C-214ENST00000456515 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
SEC22C-214ENST00000456515 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
SEC22C-214ENST00000456515 NUDCQ9Y266 331 aa9.99□□□□□ -0.81
SEC22C-214ENST00000456515 FAM208AQ9UK61 1670 aaKnown RBP9.99□□□□□ -0.81
SEC22C-214ENST00000456515 PARD3Q8TEW0 1356 aa9.99□□□□□ -0.81
SEC22C-214ENST00000456515 DIAPH1O60610 1272 aaKnown RBP9.98□□□□□ -0.81
SEC22C-214ENST00000456515 TRIM37O94972 964 aa9.98□□□□□ -0.81
SEC22C-214ENST00000456515 THSD7AQ9UPZ6 1657 aa9.97□□□□□ -0.81
SEC22C-214ENST00000456515 RAPGEF4Q8WZA2 1011 aa9.97□□□□□ -0.81
SEC22C-214ENST00000456515 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
SEC22C-214ENST00000456515 MYBBP1AQ9BQG0 1328 aaKnown RBP9.97□□□□□ -0.81
SEC22C-214ENST00000456515 IL2RBP14784 551 aa9.96□□□□□ -0.82
SEC22C-214ENST00000456515 EIF4A2Q14240 407 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms