RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
TREX1-203ENST00000456089 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
TREX1-203ENST00000456089 NFAT5O94916 1531 aa18.37■□□□□ 0.53
TREX1-203ENST00000456089 TOM1L2Q6ZVM7 507 aa18.36■□□□□ 0.53
TREX1-203ENST00000456089 CAMKK2Q96RR4 588 aa18.36■□□□□ 0.53
TREX1-203ENST00000456089 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
TREX1-203ENST00000456089 THRAP3Q9Y2W1 955 aaKnown RBP18.36■□□□□ 0.53
TREX1-203ENST00000456089 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
TREX1-203ENST00000456089 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
TREX1-203ENST00000456089 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
TREX1-203ENST00000456089 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
TREX1-203ENST00000456089 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.53
TREX1-203ENST00000456089 USP54Q70EL1 1684 aa18.33■□□□□ 0.52
TREX1-203ENST00000456089 WDR17Q8IZU2 1322 aa18.32■□□□□ 0.52
TREX1-203ENST00000456089 NME9Q86XW9 330 aa18.32■□□□□ 0.52
TREX1-203ENST00000456089 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
TREX1-203ENST00000456089 KCNH5Q8NCM2 988 aa18.31■□□□□ 0.52
TREX1-203ENST00000456089 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
TREX1-203ENST00000456089 DDB1Q16531 1140 aa18.3■□□□□ 0.52
TREX1-203ENST00000456089 PTF1AQ7RTS3 328 aa18.29■□□□□ 0.52
TREX1-203ENST00000456089 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
TREX1-203ENST00000456089 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
TREX1-203ENST00000456089 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
TREX1-203ENST00000456089 A0A1W2PP64 1363 aa18.27■□□□□ 0.51
TREX1-203ENST00000456089 HDGFL2Q7Z4V5 671 aaPredicted RBP18.26■□□□□ 0.51
TREX1-203ENST00000456089 MARCH10Q8NA82 808 aaPredicted RBP18.26■□□□□ 0.51
TREX1-203ENST00000456089 USP31Q70CQ4 1352 aa18.26■□□□□ 0.51
TREX1-203ENST00000456089 PARD3Q8TEW0 1356 aa18.26■□□□□ 0.51
TREX1-203ENST00000456089 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
TREX1-203ENST00000456089 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
TREX1-203ENST00000456089 ST20-MTHFSA0A0A6YYL1 179 aa18.25■□□□□ 0.51
TREX1-203ENST00000456089 CARD10Q9BWT7 1032 aa18.25■□□□□ 0.51
TREX1-203ENST00000456089 KAT6BQ8WYB5 2073 aa18.25■□□□□ 0.51
TREX1-203ENST00000456089 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
TREX1-203ENST00000456089 ABCC6O95255 1503 aa18.23■□□□□ 0.51
TREX1-203ENST00000456089 RGPD2P0DJD1 1756 aa18.23■□□□□ 0.51
TREX1-203ENST00000456089 TESK2Q96S53 571 aa18.23■□□□□ 0.51
TREX1-203ENST00000456089 NLRP2Q9NX02 1062 aa18.21■□□□□ 0.51
TREX1-203ENST00000456089 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
TREX1-203ENST00000456089 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
TREX1-203ENST00000456089 ERBB3P21860 1342 aa18.2■□□□□ 0.5
TREX1-203ENST00000456089 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
TREX1-203ENST00000456089 CCDC7Q96M83 1385 aa18.19■□□□□ 0.5
TREX1-203ENST00000456089 EXOC5O00471 708 aa18.19■□□□□ 0.5
TREX1-203ENST00000456089 FBLN1P23142 703 aa18.19■□□□□ 0.5
TREX1-203ENST00000456089 TNS2Q63HR2 1409 aa18.19■□□□□ 0.5
TREX1-203ENST00000456089 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
TREX1-203ENST00000456089 ANKRD24Q8TF21 1146 aa18.19■□□□□ 0.5
TREX1-203ENST00000456089 CDCA7Q9BWT1 371 aaPredicted RBP18.19■□□□□ 0.5
TREX1-203ENST00000456089 BCL11BQ9C0K0 894 aaPredicted RBP18.19■□□□□ 0.5
TREX1-203ENST00000456089 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
TREX1-203ENST00000456089 C11orf95C9JLR9 678 aaPredicted RBP18.17■□□□□ 0.5
TREX1-203ENST00000456089 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
TREX1-203ENST00000456089 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
TREX1-203ENST00000456089 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
TREX1-203ENST00000456089 CASZ1Q86V15 1759 aa18.17■□□□□ 0.5
TREX1-203ENST00000456089 BTAF1O14981 1849 aa18.16■□□□□ 0.5
TREX1-203ENST00000456089 KCNQ2O43526 872 aa18.16■□□□□ 0.5
TREX1-203ENST00000456089 PROM2Q8N271 834 aa18.16■□□□□ 0.5
TREX1-203ENST00000456089 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
TREX1-203ENST00000456089 KIF20BQ96Q89 1820 aa18.15■□□□□ 0.5
TREX1-203ENST00000456089 PLSCR1O15162 318 aa18.15■□□□□ 0.5
TREX1-203ENST00000456089 PUS7Q96PZ0 661 aaKnown RBP18.15■□□□□ 0.5
TREX1-203ENST00000456089 TIMELESSQ9UNS1 1208 aa18.15■□□□□ 0.5
TREX1-203ENST00000456089 USP47Q96K76 1375 aa18.15■□□□□ 0.5
TREX1-203ENST00000456089 BCL9O00512 1426 aa18.15■□□□□ 0.5
TREX1-203ENST00000456089 PDGFDQ9GZP0 370 aaPredicted RBP18.14■□□□□ 0.49
TREX1-203ENST00000456089 IL2RBP14784 551 aa18.13■□□□□ 0.49
TREX1-203ENST00000456089 MYOM1P52179 1685 aa18.12■□□□□ 0.49
TREX1-203ENST00000456089 COG3Q96JB2 828 aa18.12■□□□□ 0.49
TREX1-203ENST00000456089 NINLQ9Y2I6 1382 aa18.12■□□□□ 0.49
TREX1-203ENST00000456089 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
TREX1-203ENST00000456089 IP6K1Q92551 441 aa18.11■□□□□ 0.49
TREX1-203ENST00000456089 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
TREX1-203ENST00000456089 ANKRD36BQ8N2N9 1353 aa18.11■□□□□ 0.49
TREX1-203ENST00000456089 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
TREX1-203ENST00000456089 TMF1P82094 1093 aa18.09■□□□□ 0.49
TREX1-203ENST00000456089 RRS1Q15050 365 aaKnown RBP18.09■□□□□ 0.49
TREX1-203ENST00000456089 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
TREX1-203ENST00000456089 DOT1LQ8TEK3 1739 aa18.09■□□□□ 0.49
TREX1-203ENST00000456089 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
TREX1-203ENST00000456089 HOXC9P31274 260 aa18.08■□□□□ 0.48
TREX1-203ENST00000456089 AMPHP49418 695 aa18.08■□□□□ 0.48
TREX1-203ENST00000456089 SPON1Q9HCB6 807 aa18.08■□□□□ 0.48
TREX1-203ENST00000456089 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
TREX1-203ENST00000456089 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
TREX1-203ENST00000456089 FYB1O15117 783 aa18.06■□□□□ 0.48
TREX1-203ENST00000456089 ZBTB7AO95365 584 aa18.06■□□□□ 0.48
TREX1-203ENST00000456089 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
TREX1-203ENST00000456089 MEGF6O75095 1541 aa18.04■□□□□ 0.48
TREX1-203ENST00000456089 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
TREX1-203ENST00000456089 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
TREX1-203ENST00000456089 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
TREX1-203ENST00000456089 TUBGCP6Q96RT7 1819 aa18.03■□□□□ 0.48
TREX1-203ENST00000456089 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
TREX1-203ENST00000456089 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
TREX1-203ENST00000456089 NBPF6Q5VWK0 638 aa18■□□□□ 0.47
TREX1-203ENST00000456089 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
TREX1-203ENST00000456089 NBPF4Q96M43 638 aa18■□□□□ 0.47
TREX1-203ENST00000456089 CARD14Q9BXL6 1004 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms