RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
PDGFB-204ENST00000455790 TRIM37O94972 964 aa16.88■□□□□ 0.29
PDGFB-204ENST00000455790 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
PDGFB-204ENST00000455790 THRAP3Q9Y2W1 955 aaKnown RBP16.88■□□□□ 0.29
PDGFB-204ENST00000455790 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
PDGFB-204ENST00000455790 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
PDGFB-204ENST00000455790 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
PDGFB-204ENST00000455790 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
PDGFB-204ENST00000455790 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
PDGFB-204ENST00000455790 TOM1L2Q6ZVM7 507 aa16.86■□□□□ 0.29
PDGFB-204ENST00000455790 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
PDGFB-204ENST00000455790 USP47Q96K76 1375 aa16.86■□□□□ 0.29
PDGFB-204ENST00000455790 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
PDGFB-204ENST00000455790 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
PDGFB-204ENST00000455790 ABCC6O95255 1503 aa16.85■□□□□ 0.29
PDGFB-204ENST00000455790 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
PDGFB-204ENST00000455790 PSDA5PKW4 1024 aaPredicted RBP16.84■□□□□ 0.29
PDGFB-204ENST00000455790 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
PDGFB-204ENST00000455790 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
PDGFB-204ENST00000455790 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
PDGFB-204ENST00000455790 NINLQ9Y2I6 1382 aa16.82■□□□□ 0.28
PDGFB-204ENST00000455790 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
PDGFB-204ENST00000455790 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
PDGFB-204ENST00000455790 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
PDGFB-204ENST00000455790 LTN1O94822 1766 aa16.82■□□□□ 0.28
PDGFB-204ENST00000455790 OVOS2A0A0G2JMS6 1433 aa16.81■□□□□ 0.28
PDGFB-204ENST00000455790 APBA3O96018 575 aa16.81■□□□□ 0.28
PDGFB-204ENST00000455790 DDB1Q16531 1140 aa16.8■□□□□ 0.28
PDGFB-204ENST00000455790 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
PDGFB-204ENST00000455790 RREB1Q92766 1687 aa16.8■□□□□ 0.28
PDGFB-204ENST00000455790 ERBB3P21860 1342 aa16.79■□□□□ 0.28
PDGFB-204ENST00000455790 ANKRD36BQ8N2N9 1353 aa16.78■□□□□ 0.28
PDGFB-204ENST00000455790 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
PDGFB-204ENST00000455790 NUP188Q5SRE5 1749 aa16.78■□□□□ 0.28
PDGFB-204ENST00000455790 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
PDGFB-204ENST00000455790 PTF1AQ7RTS3 328 aa16.77■□□□□ 0.28
PDGFB-204ENST00000455790 LRP5O75197 1615 aa16.77■□□□□ 0.27
PDGFB-204ENST00000455790 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.27
PDGFB-204ENST00000455790 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
PDGFB-204ENST00000455790 TMF1P82094 1093 aa16.76■□□□□ 0.27
PDGFB-204ENST00000455790 TNS2Q63HR2 1409 aa16.76■□□□□ 0.27
PDGFB-204ENST00000455790 SBF2Q86WG5 1849 aa16.75■□□□□ 0.27
PDGFB-204ENST00000455790 CLSPNQ9HAW4 1339 aa16.75■□□□□ 0.27
PDGFB-204ENST00000455790 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
PDGFB-204ENST00000455790 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
PDGFB-204ENST00000455790 MYOM1P52179 1685 aa16.75■□□□□ 0.27
PDGFB-204ENST00000455790 FBLN1P23142 703 aa16.74■□□□□ 0.27
PDGFB-204ENST00000455790 NLRP2Q9NX02 1062 aa16.74■□□□□ 0.27
PDGFB-204ENST00000455790 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
PDGFB-204ENST00000455790 MAP3K19Q56UN5 1328 aa16.72■□□□□ 0.27
PDGFB-204ENST00000455790 BCL9O00512 1426 aa16.72■□□□□ 0.27
PDGFB-204ENST00000455790 COG3Q96JB2 828 aa16.72■□□□□ 0.27
PDGFB-204ENST00000455790 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
PDGFB-204ENST00000455790 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
PDGFB-204ENST00000455790 IP6K1Q92551 441 aa16.71■□□□□ 0.27
PDGFB-204ENST00000455790 RGPD3A6NKT7 1758 aaPredicted RBP16.7■□□□□ 0.26
PDGFB-204ENST00000455790 RGPD4Q7Z3J3 1758 aa16.7■□□□□ 0.26
PDGFB-204ENST00000455790 EXOC5O00471 708 aa16.7■□□□□ 0.26
PDGFB-204ENST00000455790 LTV1Q96GA3 475 aaPredicted RBP16.7■□□□□ 0.26
PDGFB-204ENST00000455790 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
PDGFB-204ENST00000455790 FYB1O15117 783 aa16.69■□□□□ 0.26
PDGFB-204ENST00000455790 IL2RBP14784 551 aa16.69■□□□□ 0.26
PDGFB-204ENST00000455790 BCL11BQ9C0K0 894 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-204ENST00000455790 HOXC9P31274 260 aa16.68■□□□□ 0.26
PDGFB-204ENST00000455790 RRS1Q15050 365 aaKnown RBP16.68■□□□□ 0.26
PDGFB-204ENST00000455790 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
PDGFB-204ENST00000455790 KIF20BQ96Q89 1820 aa16.68■□□□□ 0.26
PDGFB-204ENST00000455790 NHSQ6T4R5 1651 aa16.67■□□□□ 0.26
PDGFB-204ENST00000455790 CARD14Q9BXL6 1004 aa16.67■□□□□ 0.26
PDGFB-204ENST00000455790 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
PDGFB-204ENST00000455790 NSD3Q9BZ95 1437 aa16.67■□□□□ 0.26
PDGFB-204ENST00000455790 PLSCR1O15162 318 aa16.66■□□□□ 0.26
PDGFB-204ENST00000455790 KCNQ2O43526 872 aa16.66■□□□□ 0.26
PDGFB-204ENST00000455790 AMPHP49418 695 aa16.66■□□□□ 0.26
PDGFB-204ENST00000455790 CDCA8Q53HL2 280 aa16.66■□□□□ 0.26
PDGFB-204ENST00000455790 RTL1A6NKG5 1358 aa16.65■□□□□ 0.26
PDGFB-204ENST00000455790 RGPD2P0DJD1 1756 aa16.65■□□□□ 0.26
PDGFB-204ENST00000455790 PROM2Q8N271 834 aa16.65■□□□□ 0.26
PDGFB-204ENST00000455790 CCER1Q8TC90 406 aaPredicted RBP16.65■□□□□ 0.26
PDGFB-204ENST00000455790 ACSBG1Q96GR2 724 aa16.64■□□□□ 0.25
PDGFB-204ENST00000455790 MEGF6O75095 1541 aa16.64■□□□□ 0.25
PDGFB-204ENST00000455790 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
PDGFB-204ENST00000455790 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
PDGFB-204ENST00000455790 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
PDGFB-204ENST00000455790 TXNRD1Q16881 649 aa16.6■□□□□ 0.25
PDGFB-204ENST00000455790 NBPF6Q5VWK0 638 aa16.6■□□□□ 0.25
PDGFB-204ENST00000455790 USHBP1Q8N6Y0 703 aa16.6■□□□□ 0.25
PDGFB-204ENST00000455790 NBPF4Q96M43 638 aa16.6■□□□□ 0.25
PDGFB-204ENST00000455790 BTAF1O14981 1849 aa16.59■□□□□ 0.25
PDGFB-204ENST00000455790 HSP90AB2PQ58FF8 381 aa16.59■□□□□ 0.25
PDGFB-204ENST00000455790 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
PDGFB-204ENST00000455790 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
PDGFB-204ENST00000455790 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
PDGFB-204ENST00000455790 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.24
PDGFB-204ENST00000455790 EMILIN1Q9Y6C2 1016 aa16.58■□□□□ 0.24
PDGFB-204ENST00000455790 INSRP06213 1382 aa16.58■□□□□ 0.24
PDGFB-204ENST00000455790 FLT4P35916 1363 aa16.58■□□□□ 0.24
PDGFB-204ENST00000455790 PAPPAQ13219 1627 aa16.57■□□□□ 0.24
PDGFB-204ENST00000455790 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
PDGFB-204ENST00000455790 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms