RNA–Protein interactions for RNA: ENST00000454740.5

RC3H2-206, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5

Gene RC3H2, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-206ENST00000454740 TRIM67Q6ZTA4 783 aa11.85□□□□□ -0.51
RC3H2-206ENST00000454740 USP17L1Q7RTZ2 530 aa11.85□□□□□ -0.51
RC3H2-206ENST00000454740 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
RC3H2-206ENST00000454740 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
RC3H2-206ENST00000454740 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
RC3H2-206ENST00000454740 PLEKHM2Q8IWE5 1019 aa11.84□□□□□ -0.51
RC3H2-206ENST00000454740 FAM160A2Q8N612 972 aaPredicted RBP11.84□□□□□ -0.51
RC3H2-206ENST00000454740 IVNS1ABPQ9Y6Y0 642 aa11.84□□□□□ -0.51
RC3H2-206ENST00000454740 DXOO77932 396 aaKnown RBP11.83□□□□□ -0.52
RC3H2-206ENST00000454740 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
RC3H2-206ENST00000454740 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
RC3H2-206ENST00000454740 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
RC3H2-206ENST00000454740 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
RC3H2-206ENST00000454740 LZTS3O60299 673 aaPredicted RBP11.81□□□□□ -0.52
RC3H2-206ENST00000454740 MMP16P51512 607 aa11.81□□□□□ -0.52
RC3H2-206ENST00000454740 TRAF7Q6Q0C0 670 aa11.81□□□□□ -0.52
RC3H2-206ENST00000454740 ZNF598Q86UK7 904 aaKnown RBP11.81□□□□□ -0.52
RC3H2-206ENST00000454740 RNF135Q8IUD6 432 aa11.81□□□□□ -0.52
RC3H2-206ENST00000454740 DEPDC4Q8N2C3 294 aa11.8□□□□□ -0.52
RC3H2-206ENST00000454740 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
RC3H2-206ENST00000454740 ZBTB33Q86T24 672 aa11.79□□□□□ -0.52
RC3H2-206ENST00000454740 FAM174AQ8TBP5 190 aa11.79□□□□□ -0.52
RC3H2-206ENST00000454740 ARHGAP9Q9BRR9 750 aa11.79□□□□□ -0.52
RC3H2-206ENST00000454740 PRDM9Q9NQV7 894 aa11.79□□□□□ -0.52
RC3H2-206ENST00000454740 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
RC3H2-206ENST00000454740 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
RC3H2-206ENST00000454740 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
RC3H2-206ENST00000454740 TMEM164Q5U3C3 297 aa11.78□□□□□ -0.52
RC3H2-206ENST00000454740 RASA1P20936 1047 aa11.77□□□□□ -0.53
RC3H2-206ENST00000454740 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
RC3H2-206ENST00000454740 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L12C9JPN9 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L21D6R901 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 NCOA4Q13772 614 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 MAP7D1Q3KQU3 841 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 SND1Q7KZF4 910 aaKnown RBP eCLIP11.76□□□□□ -0.53
RC3H2-206ENST00000454740 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 PLPP7Q8NBV4 271 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
RC3H2-206ENST00000454740 FAM200AQ8TCP9 573 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 STK32AQ8WU08 396 aa11.76□□□□□ -0.53
RC3H2-206ENST00000454740 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
RC3H2-206ENST00000454740 EML3Q32P44 896 aa11.75□□□□□ -0.53
RC3H2-206ENST00000454740 ADAM32Q8TC27 787 aa11.75□□□□□ -0.53
RC3H2-206ENST00000454740 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
RC3H2-206ENST00000454740 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
RC3H2-206ENST00000454740 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
RC3H2-206ENST00000454740 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
RC3H2-206ENST00000454740 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
RC3H2-206ENST00000454740 PHTF2Q8N3S3 785 aa11.73□□□□□ -0.53
RC3H2-206ENST00000454740 CDCA7Q9BWT1 371 aaPredicted RBP11.73□□□□□ -0.53
RC3H2-206ENST00000454740 UNC93B1Q9H1C4 597 aa11.73□□□□□ -0.53
RC3H2-206ENST00000454740 GDF9O60383 454 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 PRR20EP86478 221 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 PRR20CP86479 221 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 PRR20DP86480 221 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 PRR20BP86481 221 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 PRR20AP86496 221 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 CRTC2Q53ET0 693 aaPredicted RBP11.72□□□□□ -0.53
RC3H2-206ENST00000454740 TRIM50Q86XT4 487 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
RC3H2-206ENST00000454740 PTK7Q13308 1070 aa11.71□□□□□ -0.53
RC3H2-206ENST00000454740 ATP1A2P50993 1020 aa11.7□□□□□ -0.54
RC3H2-206ENST00000454740 ANKMY2Q8IV38 441 aa11.7□□□□□ -0.54
RC3H2-206ENST00000454740 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
RC3H2-206ENST00000454740 ARID4AP29374 1257 aaPredicted RBP11.69□□□□□ -0.54
RC3H2-206ENST00000454740 RPIAP49247 311 aa11.69□□□□□ -0.54
RC3H2-206ENST00000454740 RBM25P49756 843 aaKnown RBP11.69□□□□□ -0.54
RC3H2-206ENST00000454740 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
RC3H2-206ENST00000454740 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
RC3H2-206ENST00000454740 AGERQ15109 404 aa11.68□□□□□ -0.54
RC3H2-206ENST00000454740 SH3BP5LQ7L8J4 393 aa11.68□□□□□ -0.54
RC3H2-206ENST00000454740 OGFOD1Q8N543 542 aa11.68□□□□□ -0.54
RC3H2-206ENST00000454740 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
RC3H2-206ENST00000454740 PKD2L1Q9P0L9 805 aa11.68□□□□□ -0.54
RC3H2-206ENST00000454740 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
RC3H2-206ENST00000454740 FOXC1Q12948 553 aa11.67□□□□□ -0.54
RC3H2-206ENST00000454740 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
RC3H2-206ENST00000454740 DNAAF2Q9NVR5 837 aaKnown RBP11.67□□□□□ -0.54
RC3H2-206ENST00000454740 DOLKQ9UPQ8 538 aa11.67□□□□□ -0.54
RC3H2-206ENST00000454740 SSFA2P28290 1259 aa11.66□□□□□ -0.54
RC3H2-206ENST00000454740 PTCRAQ6ISU1 281 aaPredicted RBP11.66□□□□□ -0.54
RC3H2-206ENST00000454740 BPHLQ86WA6 291 aaPredicted RBP11.66□□□□□ -0.54
RC3H2-206ENST00000454740 CLP1Q92989 425 aaKnown RBP11.66□□□□□ -0.54
RC3H2-206ENST00000454740 CD2BP2O95400 341 aaKnown RBP11.65□□□□□ -0.54
RC3H2-206ENST00000454740 DPYDQ12882 1025 aa11.65□□□□□ -0.54
RC3H2-206ENST00000454740 PKDCCQ504Y2 493 aa11.65□□□□□ -0.54
RC3H2-206ENST00000454740 TXNDC2Q86VQ3 553 aa11.65□□□□□ -0.54
RC3H2-206ENST00000454740 SWI5Q1ZZU3 235 aa11.64□□□□□ -0.55
RC3H2-206ENST00000454740 LARGE2Q8N3Y3 721 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms