RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZNF521Q96K83 1311 aa7.97□□□□□ -1.13
SDC4P-201ENST00000453285 FLT4P35916 1363 aa7.97□□□□□ -1.13
SDC4P-201ENST00000453285 VIRMAQ69YN4 1812 aaKnown RBP7.96□□□□□ -1.13
SDC4P-201ENST00000453285 U2SURPO15042 1029 aaKnown RBP7.96□□□□□ -1.14
SDC4P-201ENST00000453285 FCHSD2O94868 740 aa7.96□□□□□ -1.14
SDC4P-201ENST00000453285 GCP02774 474 aa7.96□□□□□ -1.14
SDC4P-201ENST00000453285 HOXC9P31274 260 aa7.96□□□□□ -1.14
SDC4P-201ENST00000453285 KCNH5Q8NCM2 988 aa7.96□□□□□ -1.14
SDC4P-201ENST00000453285 RSPH6AQ9H0K4 717 aa7.96□□□□□ -1.14
SDC4P-201ENST00000453285 SALL2Q9Y467 1007 aaPredicted RBP7.96□□□□□ -1.14
SDC4P-201ENST00000453285 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.14
SDC4P-201ENST00000453285 AMPHP49418 695 aa7.95□□□□□ -1.14
SDC4P-201ENST00000453285 NCBP3Q53F19 620 aaKnown RBP7.95□□□□□ -1.14
SDC4P-201ENST00000453285 ARHGEF25Q86VW2 580 aa7.95□□□□□ -1.14
SDC4P-201ENST00000453285 TCP11L2Q8N4U5 519 aa7.95□□□□□ -1.14
SDC4P-201ENST00000453285 NGEFQ8N5V2 710 aa7.95□□□□□ -1.14
SDC4P-201ENST00000453285 IP6K1Q92551 441 aa7.95□□□□□ -1.14
SDC4P-201ENST00000453285 RTL1A6NKG5 1358 aa7.95□□□□□ -1.14
SDC4P-201ENST00000453285 PDE3BQ13370 1112 aa7.94□□□□□ -1.14
SDC4P-201ENST00000453285 LMOD2Q6P5Q4 547 aa7.94□□□□□ -1.14
SDC4P-201ENST00000453285 CDCA7LQ96GN5 454 aa7.94□□□□□ -1.14
SDC4P-201ENST00000453285 CAMTA1Q9Y6Y1 1673 aa7.94□□□□□ -1.14
SDC4P-201ENST00000453285 PHLPP1O60346 1717 aa7.94□□□□□ -1.14
SDC4P-201ENST00000453285 ARHGEF10O15013 1369 aa7.94□□□□□ -1.14
SDC4P-201ENST00000453285 COL22A1Q8NFW1 1626 aaPredicted RBP7.93□□□□□ -1.14
SDC4P-201ENST00000453285 HMOX1P09601 288 aa7.93□□□□□ -1.14
SDC4P-201ENST00000453285 PRKAR2BP31323 418 aa7.93□□□□□ -1.14
SDC4P-201ENST00000453285 TMPOP42166 694 aaKnown RBP7.93□□□□□ -1.14
SDC4P-201ENST00000453285 CCDC27Q2M243 656 aa7.93□□□□□ -1.14
SDC4P-201ENST00000453285 PHACTR3Q96KR7 559 aa7.93□□□□□ -1.14
SDC4P-201ENST00000453285 EYA1Q99502 592 aa7.93□□□□□ -1.14
SDC4P-201ENST00000453285 PNNQ9H307 717 aaKnown RBP7.93□□□□□ -1.14
SDC4P-201ENST00000453285 IGSF1Q8N6C5 1336 aa7.93□□□□□ -1.14
SDC4P-201ENST00000453285 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
SDC4P-201ENST00000453285 LMO7Q8WWI1 1683 aa7.92□□□□□ -1.14
SDC4P-201ENST00000453285 FAM208AQ9UK61 1670 aaKnown RBP7.92□□□□□ -1.14
SDC4P-201ENST00000453285 AEBP1Q8IUX7 1158 aa7.92□□□□□ -1.14
SDC4P-201ENST00000453285 WWC1Q8IX03 1113 aa7.92□□□□□ -1.14
SDC4P-201ENST00000453285 TRMT2AQ8IZ69 625 aaKnown RBP7.92□□□□□ -1.14
SDC4P-201ENST00000453285 CABLES1Q8TDN4 633 aa7.92□□□□□ -1.14
SDC4P-201ENST00000453285 RRP7AQ9Y3A4 280 aaKnown RBP7.92□□□□□ -1.14
SDC4P-201ENST00000453285 KDRP35968 1356 aa7.92□□□□□ -1.14
SDC4P-201ENST00000453285 ABCC6O95255 1503 aa7.92□□□□□ -1.14
SDC4P-201ENST00000453285 PLEKHG5O94827 1062 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 ZC3H6P61129 1189 aaKnown RBP7.91□□□□□ -1.14
SDC4P-201ENST00000453285 GOLGA2Q08379 1002 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 SLFN5Q08AF3 891 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 SULT6B1Q6IMI4 303 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 SPINK5Q9NQ38 1064 aaPredicted RBP7.91□□□□□ -1.14
SDC4P-201ENST00000453285 TRIM35Q9UPQ4 493 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 AXIN2Q9Y2T1 843 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 CPDO75976 1380 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 NCAPD2Q15021 1401 aa7.91□□□□□ -1.14
SDC4P-201ENST00000453285 MAPK8IP3Q9UPT6 1336 aa7.9□□□□□ -1.14
SDC4P-201ENST00000453285 NEUROD2Q15784 382 aa7.9□□□□□ -1.14
SDC4P-201ENST00000453285 DUSP27Q5VZP5 1158 aa7.9□□□□□ -1.14
SDC4P-201ENST00000453285 WDR63Q8IWG1 891 aa7.9□□□□□ -1.14
SDC4P-201ENST00000453285 TOM1O60784 492 aa7.89□□□□□ -1.15
SDC4P-201ENST00000453285 RIPK4P57078 832 aa7.89□□□□□ -1.15
SDC4P-201ENST00000453285 NFE2L2Q16236 605 aa7.89□□□□□ -1.15
SDC4P-201ENST00000453285 NBPF6Q5VWK0 638 aa7.89□□□□□ -1.15
SDC4P-201ENST00000453285 LRRC59Q96AG4 307 aaKnown RBP7.89□□□□□ -1.15
SDC4P-201ENST00000453285 LTV1Q96GA3 475 aaPredicted RBP7.89□□□□□ -1.15
SDC4P-201ENST00000453285 NBPF4Q96M43 638 aa7.89□□□□□ -1.15
SDC4P-201ENST00000453285 KIAA0232Q92628 1395 aa7.88□□□□□ -1.15
SDC4P-201ENST00000453285 ZBTB7CA1YPR0 619 aa7.88□□□□□ -1.15
SDC4P-201ENST00000453285 ANKRD24Q8TF21 1146 aa7.88□□□□□ -1.15
SDC4P-201ENST00000453285 SUPT16HQ9Y5B9 1047 aaKnown RBP7.88□□□□□ -1.15
SDC4P-201ENST00000453285 GTF3C3Q9Y5Q9 886 aa7.88□□□□□ -1.15
SDC4P-201ENST00000453285 COL14A1Q05707 1796 aaKnown RBP7.87□□□□□ -1.15
SDC4P-201ENST00000453285 ERBB3P21860 1342 aa7.87□□□□□ -1.15
SDC4P-201ENST00000453285 RNF123Q5XPI4 1314 aa7.87□□□□□ -1.15
SDC4P-201ENST00000453285 E9PSI1 815 aa7.87□□□□□ -1.15
SDC4P-201ENST00000453285 CHRNA2Q15822 529 aa7.87□□□□□ -1.15
SDC4P-201ENST00000453285 USHBP1Q8N6Y0 703 aa7.87□□□□□ -1.15
SDC4P-201ENST00000453285 CERKQ8TCT0 537 aa7.87□□□□□ -1.15
SDC4P-201ENST00000453285 LRRC37A3O60309 1634 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 IL16Q14005 1332 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 UBAP1LF5GYI3 381 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 NEFMP07197 916 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 MTHFSDQ2M296 383 aaKnown RBP7.86□□□□□ -1.15
SDC4P-201ENST00000453285 SIPA1L3O60292 1781 aaPredicted RBP7.86□□□□□ -1.15
SDC4P-201ENST00000453285 SCN11AQ9UI33 1791 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 PKD1L3Q7Z443 1732 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 CACNA1FO60840 1977 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 PLCH1Q4KWH8 1693 aa7.86□□□□□ -1.15
SDC4P-201ENST00000453285 FAM83GA6ND36 823 aa7.85□□□□□ -1.15
SDC4P-201ENST00000453285 PIP4K2BP78356 416 aa7.85□□□□□ -1.15
SDC4P-201ENST00000453285 NRAPQ86VF7 1730 aa7.85□□□□□ -1.15
SDC4P-201ENST00000453285 SHANK3Q9BYB0 1731 aa7.85□□□□□ -1.15
SDC4P-201ENST00000453285 ADAMTS7Q9UKP4 1686 aa7.85□□□□□ -1.15
SDC4P-201ENST00000453285 WNK3Q9BYP7 1800 aa7.85□□□□□ -1.15
SDC4P-201ENST00000453285 PARP4Q9UKK3 1724 aaKnown RBP7.84□□□□□ -1.15
SDC4P-201ENST00000453285 COL5A2P05997 1499 aaPredicted RBP7.84□□□□□ -1.15
SDC4P-201ENST00000453285 ZNF853P0CG23 659 aa7.84□□□□□ -1.15
SDC4P-201ENST00000453285 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
SDC4P-201ENST00000453285 THUMPD2Q9BTF0 503 aaKnown RBP7.84□□□□□ -1.15
SDC4P-201ENST00000453285 PRDM11Q9NQV5 511 aa7.84□□□□□ -1.15
SDC4P-201ENST00000453285 RCAN3Q9UKA8 241 aa7.84□□□□□ -1.15
SDC4P-201ENST00000453285 NWD2Q9ULI1 1742 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms