RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ABCC6O95255 1503 aa20.63■□□□□ 0.89
LYSMD3-202ENST00000453259 CPSF1Q10570 1443 aaKnown RBP20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 EVC2Q86UK5 1308 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 TOM1L2Q6ZVM7 507 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 ZNF692Q9BU19 519 aaPredicted RBP20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 COL18A1P39060 1754 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
LYSMD3-202ENST00000453259 TRPM1Q7Z4N2 1603 aa20.6■□□□□ 0.89
LYSMD3-202ENST00000453259 TTC21AQ8NDW8 1320 aa20.59■□□□□ 0.89
LYSMD3-202ENST00000453259 CASZ1Q86V15 1759 aa20.59■□□□□ 0.89
LYSMD3-202ENST00000453259 AKAP12Q02952 1782 aa20.58■□□□□ 0.89
LYSMD3-202ENST00000453259 ARHGEF25Q86VW2 580 aa20.57■□□□□ 0.88
LYSMD3-202ENST00000453259 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
LYSMD3-202ENST00000453259 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
LYSMD3-202ENST00000453259 ZBTB7CA1YPR0 619 aa20.55■□□□□ 0.88
LYSMD3-202ENST00000453259 MARCH10Q8NA82 808 aaPredicted RBP20.54■□□□□ 0.88
LYSMD3-202ENST00000453259 AXIN2Q9Y2T1 843 aa20.54■□□□□ 0.88
LYSMD3-202ENST00000453259 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
LYSMD3-202ENST00000453259 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
LYSMD3-202ENST00000453259 NFAT5O94916 1531 aa20.52■□□□□ 0.87
LYSMD3-202ENST00000453259 TNS2Q63HR2 1409 aa20.52■□□□□ 0.87
LYSMD3-202ENST00000453259 EXOC5O00471 708 aa20.51■□□□□ 0.87
LYSMD3-202ENST00000453259 CSB-PGBD3P0DP91 1061 aa20.5■□□□□ 0.87
LYSMD3-202ENST00000453259 PROM2Q8N271 834 aa20.5■□□□□ 0.87
LYSMD3-202ENST00000453259 STK32BQ9NY57 414 aa20.5■□□□□ 0.87
LYSMD3-202ENST00000453259 SBNO2Q9Y2G9 1366 aa20.49■□□□□ 0.87
LYSMD3-202ENST00000453259 USP54Q70EL1 1684 aa20.48■□□□□ 0.87
LYSMD3-202ENST00000453259 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
LYSMD3-202ENST00000453259 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
LYSMD3-202ENST00000453259 ROCK2O75116 1388 aaKnown RBP20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 KTN1Q86UP2 1357 aaKnown RBP20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 SLC15A2Q16348 729 aa20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 NHSQ6T4R5 1651 aa20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 PTGER2P43116 358 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 MTFR1LQ9H019 292 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 MYOM1P52179 1685 aa20.45■□□□□ 0.86
LYSMD3-202ENST00000453259 RGPD5Q99666 1765 aa20.45■□□□□ 0.86
LYSMD3-202ENST00000453259 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
LYSMD3-202ENST00000453259 ZBTB7AO95365 584 aa20.43■□□□□ 0.86
LYSMD3-202ENST00000453259 ERBB3P21860 1342 aa20.43■□□□□ 0.86
LYSMD3-202ENST00000453259 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
LYSMD3-202ENST00000453259 SOX12O15370 315 aa20.4■□□□□ 0.86
LYSMD3-202ENST00000453259 PAPPAQ13219 1627 aa20.4■□□□□ 0.86
LYSMD3-202ENST00000453259 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
LYSMD3-202ENST00000453259 IL2RBP14784 551 aa20.39■□□□□ 0.85
LYSMD3-202ENST00000453259 SGIP1Q9BQI5 828 aa20.39■□□□□ 0.85
LYSMD3-202ENST00000453259 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
LYSMD3-202ENST00000453259 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
LYSMD3-202ENST00000453259 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
LYSMD3-202ENST00000453259 EDC4Q6P2E9 1401 aaKnown RBP20.36■□□□□ 0.85
LYSMD3-202ENST00000453259 NLRP2Q9NX02 1062 aa20.36■□□□□ 0.85
LYSMD3-202ENST00000453259 LTN1O94822 1766 aa20.36■□□□□ 0.85
LYSMD3-202ENST00000453259 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 PUS7Q96PZ0 661 aaKnown RBP20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 ARXQ96QS3 562 aa20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 BTAF1O14981 1849 aa20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 SLC27A3Q5K4L6 730 aa20.33■□□□□ 0.85
LYSMD3-202ENST00000453259 TERF2IPQ9NYB0 399 aa20.33■□□□□ 0.85
LYSMD3-202ENST00000453259 CHD4Q14839 1912 aa20.33■□□□□ 0.84
LYSMD3-202ENST00000453259 QSER1Q2KHR3 1735 aa20.33■□□□□ 0.84
LYSMD3-202ENST00000453259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
LYSMD3-202ENST00000453259 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
LYSMD3-202ENST00000453259 NME9Q86XW9 330 aa20.3■□□□□ 0.84
LYSMD3-202ENST00000453259 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
LYSMD3-202ENST00000453259 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
LYSMD3-202ENST00000453259 SLC24A1O60721 1099 aa20.28■□□□□ 0.84
LYSMD3-202ENST00000453259 IP6K1Q92551 441 aa20.27■□□□□ 0.84
LYSMD3-202ENST00000453259 CARD11Q9BXL7 1154 aa20.27■□□□□ 0.84
LYSMD3-202ENST00000453259 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
LYSMD3-202ENST00000453259 UTRNP46939 3433 aa20.27■□□□□ 0.83
LYSMD3-202ENST00000453259 A0A1W2PP64 1363 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 POLD1P28340 1107 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 AKT1S1Q96B36 256 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
LYSMD3-202ENST00000453259 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
LYSMD3-202ENST00000453259 LRRC4BQ9NT99 713 aa20.25■□□□□ 0.83
LYSMD3-202ENST00000453259 ANKRD36BQ8N2N9 1353 aa20.24■□□□□ 0.83
LYSMD3-202ENST00000453259 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
LYSMD3-202ENST00000453259 CGNL1Q0VF96 1302 aa20.21■□□□□ 0.83
LYSMD3-202ENST00000453259 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
LYSMD3-202ENST00000453259 C1QTNF8P60827 252 aa20.2■□□□□ 0.82
LYSMD3-202ENST00000453259 GPR162Q16538 588 aa20.2■□□□□ 0.82
LYSMD3-202ENST00000453259 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
LYSMD3-202ENST00000453259 LY75O60449 1722 aa20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 COG3Q96JB2 828 aa20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
LYSMD3-202ENST00000453259 DOT1LQ8TEK3 1739 aa20.17■□□□□ 0.82
LYSMD3-202ENST00000453259 HOXC9P31274 260 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms