RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 C8orf37Q96NL8 207 aa11.93□□□□□ -0.5
LINC01647-201ENST00000453135 PIK3C2AO00443 1686 aa11.92□□□□□ -0.5
LINC01647-201ENST00000453135 SOX12O15370 315 aa11.92□□□□□ -0.5
LINC01647-201ENST00000453135 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
LINC01647-201ENST00000453135 NGLY1Q96IV0 654 aa11.92□□□□□ -0.5
LINC01647-201ENST00000453135 PER1O15534 1290 aaPredicted RBP11.91□□□□□ -0.5
LINC01647-201ENST00000453135 OVOS2A0A0J9YW53 1432 aa11.9□□□□□ -0.5
LINC01647-201ENST00000453135 FAM83GA6ND36 823 aa11.9□□□□□ -0.5
LINC01647-201ENST00000453135 DDX10Q13206 875 aaKnown RBP11.9□□□□□ -0.5
LINC01647-201ENST00000453135 OVOS2Q6IE36 1432 aa11.9□□□□□ -0.5
LINC01647-201ENST00000453135 PRDM11Q9NQV5 511 aa11.9□□□□□ -0.5
LINC01647-201ENST00000453135 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
LINC01647-201ENST00000453135 ZBTB7CA1YPR0 619 aa11.89□□□□□ -0.51
LINC01647-201ENST00000453135 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
LINC01647-201ENST00000453135 SLIT3O75094 1523 aa11.89□□□□□ -0.51
LINC01647-201ENST00000453135 CPDO75976 1380 aa11.89□□□□□ -0.51
LINC01647-201ENST00000453135 NSD2O96028 1365 aa11.89□□□□□ -0.51
LINC01647-201ENST00000453135 AFF2P51816 1311 aa11.88□□□□□ -0.51
LINC01647-201ENST00000453135 CHRNA2Q15822 529 aa11.88□□□□□ -0.51
LINC01647-201ENST00000453135 ARHGEF25Q86VW2 580 aa11.88□□□□□ -0.51
LINC01647-201ENST00000453135 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
LINC01647-201ENST00000453135 PHRF1Q9P1Y6 1649 aaKnown RBP11.87□□□□□ -0.51
LINC01647-201ENST00000453135 ABCA3Q99758 1704 aa11.87□□□□□ -0.51
LINC01647-201ENST00000453135 CRYBG1Q9Y4K1 1723 aa11.87□□□□□ -0.51
LINC01647-201ENST00000453135 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC01647-201ENST00000453135 ZNF772Q68DY9 489 aaPredicted RBP11.87□□□□□ -0.51
LINC01647-201ENST00000453135 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
LINC01647-201ENST00000453135 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
LINC01647-201ENST00000453135 USP21Q9UK80 565 aa11.87□□□□□ -0.51
LINC01647-201ENST00000453135 FBLN1P23142 703 aa11.86□□□□□ -0.51
LINC01647-201ENST00000453135 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
LINC01647-201ENST00000453135 BTG4Q9NY30 223 aa11.86□□□□□ -0.51
LINC01647-201ENST00000453135 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
LINC01647-201ENST00000453135 AATKQ6ZMQ8 1374 aa11.85□□□□□ -0.51
LINC01647-201ENST00000453135 NPC1L1Q9UHC9 1359 aa11.85□□□□□ -0.51
LINC01647-201ENST00000453135 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
LINC01647-201ENST00000453135 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
LINC01647-201ENST00000453135 CNGB1Q14028 1251 aaPredicted RBP11.85□□□□□ -0.51
LINC01647-201ENST00000453135 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
LINC01647-201ENST00000453135 RGS17Q9UGC6 210 aaPredicted RBP11.85□□□□□ -0.51
LINC01647-201ENST00000453135 KIF20BQ96Q89 1820 aa11.85□□□□□ -0.51
LINC01647-201ENST00000453135 MARF1Q9Y4F3 1742 aaKnown RBP11.85□□□□□ -0.51
LINC01647-201ENST00000453135 SLIT2O94813 1529 aa11.85□□□□□ -0.51
LINC01647-201ENST00000453135 NFAT5O94916 1531 aa11.85□□□□□ -0.51
LINC01647-201ENST00000453135 AMPHP49418 695 aa11.84□□□□□ -0.51
LINC01647-201ENST00000453135 EVA1CP58658 441 aa11.84□□□□□ -0.51
LINC01647-201ENST00000453135 RRS1Q15050 365 aaKnown RBP11.84□□□□□ -0.51
LINC01647-201ENST00000453135 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
LINC01647-201ENST00000453135 MAP3K19Q56UN5 1328 aa11.84□□□□□ -0.51
LINC01647-201ENST00000453135 COL14A1Q05707 1796 aaKnown RBP11.83□□□□□ -0.52
LINC01647-201ENST00000453135 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
LINC01647-201ENST00000453135 IP6K1Q92551 441 aa11.83□□□□□ -0.52
LINC01647-201ENST00000453135 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.52
LINC01647-201ENST00000453135 TRPC5Q9UL62 973 aaPredicted RBP11.83□□□□□ -0.52
LINC01647-201ENST00000453135 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
LINC01647-201ENST00000453135 BCL9LQ86UU0 1499 aa11.83□□□□□ -0.52
LINC01647-201ENST00000453135 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
LINC01647-201ENST00000453135 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
LINC01647-201ENST00000453135 HOXC9P31274 260 aa11.81□□□□□ -0.52
LINC01647-201ENST00000453135 POTEAQ6S8J7 498 aa11.81□□□□□ -0.52
LINC01647-201ENST00000453135 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
LINC01647-201ENST00000453135 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
LINC01647-201ENST00000453135 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
LINC01647-201ENST00000453135 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
LINC01647-201ENST00000453135 VPS72Q15906 364 aa11.8□□□□□ -0.52
LINC01647-201ENST00000453135 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
LINC01647-201ENST00000453135 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
LINC01647-201ENST00000453135 RTL1A6NKG5 1358 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 ATRNO75882 1429 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 CSB-PGBD3P0DP91 1061 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 LARP1Q6PKG0 1096 aaKnown RBP11.79□□□□□ -0.52
LINC01647-201ENST00000453135 ANKRD24Q8TF21 1146 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
LINC01647-201ENST00000453135 ANKRD26Q9UPS8 1709 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 ABCC6O95255 1503 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 FLT4P35916 1363 aa11.79□□□□□ -0.52
LINC01647-201ENST00000453135 BLMP54132 1417 aaPredicted RBP11.78□□□□□ -0.52
LINC01647-201ENST00000453135 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
LINC01647-201ENST00000453135 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
LINC01647-201ENST00000453135 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
LINC01647-201ENST00000453135 NWD2Q9ULI1 1742 aa11.78□□□□□ -0.52
LINC01647-201ENST00000453135 RXRBP28702 533 aa11.78□□□□□ -0.52
LINC01647-201ENST00000453135 RBM6P78332 1123 aaKnown RBP11.78□□□□□ -0.52
LINC01647-201ENST00000453135 HSP90AB2PQ58FF8 381 aa11.78□□□□□ -0.52
LINC01647-201ENST00000453135 TOM1L2Q6ZVM7 507 aa11.78□□□□□ -0.52
LINC01647-201ENST00000453135 LTV1Q96GA3 475 aaPredicted RBP11.78□□□□□ -0.52
LINC01647-201ENST00000453135 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
LINC01647-201ENST00000453135 COL18A1P39060 1754 aa11.77□□□□□ -0.52
LINC01647-201ENST00000453135 MTHFSP49914 203 aa11.77□□□□□ -0.53
LINC01647-201ENST00000453135 ERBB3P21860 1342 aa11.77□□□□□ -0.53
LINC01647-201ENST00000453135 SPATA31A5Q5VU36 1347 aa11.77□□□□□ -0.53
LINC01647-201ENST00000453135 SPATA31A7Q8IWB4 1347 aa11.77□□□□□ -0.53
LINC01647-201ENST00000453135 INSRP06213 1382 aa11.77□□□□□ -0.53
LINC01647-201ENST00000453135 LTN1O94822 1766 aa11.77□□□□□ -0.53
LINC01647-201ENST00000453135 RALBP1Q15311 655 aa11.76□□□□□ -0.53
LINC01647-201ENST00000453135 SPOCK2Q92563 424 aa11.76□□□□□ -0.53
LINC01647-201ENST00000453135 NLRP2Q9NX02 1062 aa11.76□□□□□ -0.53
LINC01647-201ENST00000453135 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
LINC01647-201ENST00000453135 SPATA31A1Q5TZJ5 1347 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms