RNA–Protein interactions for RNA: ENST00000452879.1

TRIM60P19-201, Transcript of tripartite motif containing 60 pseudogene 19, humanhuman

BASIC

Gene TRIM60P19, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60P19-201ENST00000452879 SMC4Q9NTJ3 1288 aa10.72□□□□□ -0.69
TRIM60P19-201ENST00000452879 LETM1O95202 739 aaPredicted RBP10.71□□□□□ -0.69
TRIM60P19-201ENST00000452879 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
TRIM60P19-201ENST00000452879 ZSCAN23Q3MJ62 389 aa10.71□□□□□ -0.69
TRIM60P19-201ENST00000452879 LMBRD1Q9NUN5 540 aa10.71□□□□□ -0.69
TRIM60P19-201ENST00000452879 ATAD2Q6PL18 1390 aa10.71□□□□□ -0.7
TRIM60P19-201ENST00000452879 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.7
TRIM60P19-201ENST00000452879 NSD3Q9BZ95 1437 aa10.7□□□□□ -0.7
TRIM60P19-201ENST00000452879 LMTK2Q8IWU2 1503 aa10.7□□□□□ -0.7
TRIM60P19-201ENST00000452879 ST18O60284 1047 aa10.7□□□□□ -0.7
TRIM60P19-201ENST00000452879 CASC1Q6TDU7 716 aa10.7□□□□□ -0.7
TRIM60P19-201ENST00000452879 MYRIPQ8NFW9 859 aa10.7□□□□□ -0.7
TRIM60P19-201ENST00000452879 ANKRD36BQ8N2N9 1353 aa10.7□□□□□ -0.7
TRIM60P19-201ENST00000452879 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 UQCRHP07919 91 aa10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 FAM193AP78312 1265 aa10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 DMTNQ08495 405 aa10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 ITPRIPQ8IWB1 547 aa10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 PPRC1Q5VV67 1664 aaKnown RBP10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 ABCA6Q8N139 1617 aa10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 ABCC1P33527 1531 aa10.69□□□□□ -0.7
TRIM60P19-201ENST00000452879 SPDYE2BA6NHP3 402 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 SPDYE6P0CI01 402 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 KIAA2012Q0VF49 1180 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 SPDYE2Q495Y8 402 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 SPRYD3Q8NCJ5 442 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 SSH1Q8WYL5 1049 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 R3HCC1Q9Y3T6 440 aaKnown RBP10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 IFT172Q9UG01 1749 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 TMPOP42166 694 aaKnown RBP10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 MTHFSP49914 203 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 INTS3Q68E01 1043 aaKnown RBP10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 IL17RAQ96F46 866 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 INTS4Q96HW7 963 aaKnown RBP10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 PODXL2Q9NZ53 605 aa10.68□□□□□ -0.7
TRIM60P19-201ENST00000452879 ZBTB7BO15156 539 aaPredicted RBP10.67□□□□□ -0.7
TRIM60P19-201ENST00000452879 REC8O95072 547 aa10.67□□□□□ -0.7
TRIM60P19-201ENST00000452879 SYCP1Q15431 976 aa10.67□□□□□ -0.7
TRIM60P19-201ENST00000452879 TBC1D9Q6ZT07 1266 aa10.67□□□□□ -0.7
TRIM60P19-201ENST00000452879 C14orf93Q9H972 538 aaKnown RBP10.67□□□□□ -0.7
TRIM60P19-201ENST00000452879 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
TRIM60P19-201ENST00000452879 NOB1Q9ULX3 412 aaKnown RBP10.67□□□□□ -0.7
TRIM60P19-201ENST00000452879 SSFA2P28290 1259 aa10.66□□□□□ -0.7
TRIM60P19-201ENST00000452879 EXOSC9Q06265 439 aaKnown RBP10.66□□□□□ -0.7
TRIM60P19-201ENST00000452879 LHX8Q68G74 356 aa10.66□□□□□ -0.7
TRIM60P19-201ENST00000452879 PDCL2Q8N4E4 241 aa10.66□□□□□ -0.7
TRIM60P19-201ENST00000452879 TMEM57Q8N5G2 664 aa10.66□□□□□ -0.7
TRIM60P19-201ENST00000452879 FEZ1Q99689 392 aa10.66□□□□□ -0.7
TRIM60P19-201ENST00000452879 FAM13BQ9NYF5 915 aa10.66□□□□□ -0.7
TRIM60P19-201ENST00000452879 KIF1BO60333 1816 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 PNPLA6Q8IY17 1366 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 CDC42BPGQ6DT37 1551 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 FCHSD2O94868 740 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 PRKAR2AP13861 404 aaKnown RBP10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 PIBF1Q8WXW3 757 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 ARXQ96QS3 562 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 API5Q9BZZ5 524 aaKnown RBP10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 RBSNQ9H1K0 784 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.7
TRIM60P19-201ENST00000452879 SPAG9O60271 1321 aaKnown RBP10.65□□□□□ -0.71
TRIM60P19-201ENST00000452879 EVC2Q86UK5 1308 aa10.65□□□□□ -0.71
TRIM60P19-201ENST00000452879 ZC3H13Q5T200 1668 aaKnown RBP10.65□□□□□ -0.71
TRIM60P19-201ENST00000452879 U2AF1L5P0DN76 240 aaPredicted RBP10.64□□□□□ -0.71
TRIM60P19-201ENST00000452879 ANAPC15P60006 121 aa10.64□□□□□ -0.71
TRIM60P19-201ENST00000452879 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRIM60P19-201ENST00000452879 CREBRFQ8IUR6 639 aa10.64□□□□□ -0.71
TRIM60P19-201ENST00000452879 USP26Q9BXU7 913 aa10.64□□□□□ -0.71
TRIM60P19-201ENST00000452879 SPTLC3Q9NUV7 552 aa10.64□□□□□ -0.71
TRIM60P19-201ENST00000452879 ZFYVE9O95405 1425 aa10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 MCTP1Q6DN14 999 aa10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 CAVIN1Q6NZI2 390 aaKnown RBP10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 RPAP2Q8IXW5 612 aaPredicted RBP10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 SPDYE1Q8NFV5 336 aaPredicted RBP10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 LNPKQ9C0E8 428 aa10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 DCTPP1Q9H773 170 aa10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 TRIM35Q9UPQ4 493 aa10.63□□□□□ -0.71
TRIM60P19-201ENST00000452879 ADGRB3O60242 1522 aa10.62□□□□□ -0.71
TRIM60P19-201ENST00000452879 ZFYVE16Q7Z3T8 1539 aa10.62□□□□□ -0.71
TRIM60P19-201ENST00000452879 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
TRIM60P19-201ENST00000452879 ANKRD45Q5TZF3 282 aa10.62□□□□□ -0.71
TRIM60P19-201ENST00000452879 TSPY26PQ9H489 355 aa10.62□□□□□ -0.71
TRIM60P19-201ENST00000452879 ABCC4O15439 1325 aa10.62□□□□□ -0.71
TRIM60P19-201ENST00000452879 LMOD3Q0VAK6 560 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 CUL4AQ13619 759 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 TMEM87AQ8NBN3 555 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 USP25Q9UHP3 1055 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 TNNQ9UQP3 1299 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 ABCA9Q8IUA7 1624 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 COL3A1P02461 1466 aaPredicted RBP10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 ADGRB1O14514 1584 aa10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 ZSCAN20P17040 1043 aaPredicted RBP10.61□□□□□ -0.71
TRIM60P19-201ENST00000452879 TTC22Q5TAA0 569 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms