RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
LINC00393-202ENST00000452852 CDK15Q96Q40 435 aa8.28□□□□□ -1.08
LINC00393-202ENST00000452852 GPSM3Q9Y4H4 160 aa8.28□□□□□ -1.08
LINC00393-202ENST00000452852 WASF2Q9Y6W5 498 aa8.28□□□□□ -1.08
LINC00393-202ENST00000452852 ZBTB33Q86T24 672 aa8.27□□□□□ -1.09
LINC00393-202ENST00000452852 IRF7Q92985 503 aa8.27□□□□□ -1.09
LINC00393-202ENST00000452852 NDUFB9Q9Y6M9 179 aa8.27□□□□□ -1.09
LINC00393-202ENST00000452852 APBB1O00213 710 aa8.26□□□□□ -1.09
LINC00393-202ENST00000452852 GPR37L1O60883 481 aa8.26□□□□□ -1.09
LINC00393-202ENST00000452852 GMPRP36959 345 aa8.26□□□□□ -1.09
LINC00393-202ENST00000452852 TRMT44Q8IYL2 757 aaKnown RBP8.26□□□□□ -1.09
LINC00393-202ENST00000452852 ADAM32Q8TC27 787 aa8.26□□□□□ -1.09
LINC00393-202ENST00000452852 ADH1CP00326 375 aa8.25□□□□□ -1.09
LINC00393-202ENST00000452852 GRM5P41594 1212 aa8.25□□□□□ -1.09
LINC00393-202ENST00000452852 MCM6Q14566 821 aa8.25□□□□□ -1.09
LINC00393-202ENST00000452852 NNTQ13423 1086 aa8.24□□□□□ -1.09
LINC00393-202ENST00000452852 VASH1Q7L8A9 365 aaPredicted RBP8.24□□□□□ -1.09
LINC00393-202ENST00000452852 TBC1D2BQ9UPU7 963 aa8.24□□□□□ -1.09
LINC00393-202ENST00000452852 ZBBXA8MT70 800 aa8.23□□□□□ -1.09
LINC00393-202ENST00000452852 FBXO45P0C2W1 286 aa8.23□□□□□ -1.09
LINC00393-202ENST00000452852 NXF1Q9UBU9 619 aaKnown RBP8.23□□□□□ -1.09
LINC00393-202ENST00000452852 MAP4K5Q9Y4K4 846 aa8.23□□□□□ -1.09
LINC00393-202ENST00000452852 SUPT5HO00267 1087 aaKnown RBP8.22□□□□□ -1.09
LINC00393-202ENST00000452852 KCTD17Q8N5Z5 321 aa8.22□□□□□ -1.09
LINC00393-202ENST00000452852 SLC10A4Q96EP9 437 aa8.22□□□□□ -1.09
LINC00393-202ENST00000452852 NR3C2P08235 984 aa8.21□□□□□ -1.1
LINC00393-202ENST00000452852 FSHRP23945 695 aa8.21□□□□□ -1.1
LINC00393-202ENST00000452852 NR5A1Q13285 461 aa8.21□□□□□ -1.1
LINC00393-202ENST00000452852 HOMEZQ8IX15 550 aa8.21□□□□□ -1.1
LINC00393-202ENST00000452852 GDPD2Q9HCC8 539 aa8.21□□□□□ -1.1
LINC00393-202ENST00000452852 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
LINC00393-202ENST00000452852 NR1H3Q13133 447 aa8.2□□□□□ -1.1
LINC00393-202ENST00000452852 DZIP3Q86Y13 1208 aaKnown RBP8.2□□□□□ -1.1
LINC00393-202ENST00000452852 NPAS3Q8IXF0 933 aa8.2□□□□□ -1.1
LINC00393-202ENST00000452852 KCTD15Q96SI1 283 aaPredicted RBP8.2□□□□□ -1.1
LINC00393-202ENST00000452852 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
LINC00393-202ENST00000452852 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
LINC00393-202ENST00000452852 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
LINC00393-202ENST00000452852 CAPN5O15484 640 aaPredicted RBP8.18□□□□□ -1.1
LINC00393-202ENST00000452852 ABL2P42684 1182 aa8.18□□□□□ -1.1
LINC00393-202ENST00000452852 WDR4P57081 412 aaKnown RBP8.18□□□□□ -1.1
LINC00393-202ENST00000452852 FLIIQ13045 1269 aa8.18□□□□□ -1.1
LINC00393-202ENST00000452852 IRF5Q13568 498 aa8.18□□□□□ -1.1
LINC00393-202ENST00000452852 PCDHB9Q9Y5E1 797 aa8.18□□□□□ -1.1
LINC00393-202ENST00000452852 CCDC180Q9P1Z9 1646 aa8.18□□□□□ -1.1
LINC00393-202ENST00000452852 TIMP2P16035 220 aa8.17□□□□□ -1.1
LINC00393-202ENST00000452852 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
LINC00393-202ENST00000452852 NBPF20Q3BBV1 942 aa8.16□□□□□ -1.1
LINC00393-202ENST00000452852 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
LINC00393-202ENST00000452852 CCDC116Q8IYX3 515 aa8.16□□□□□ -1.1
LINC00393-202ENST00000452852 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
LINC00393-202ENST00000452852 ZIC2O95409 532 aaPredicted RBP8.15□□□□□ -1.1
LINC00393-202ENST00000452852 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
LINC00393-202ENST00000452852 POM121Q96HA1 1249 aa8.15□□□□□ -1.1
LINC00393-202ENST00000452852 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
LINC00393-202ENST00000452852 ESPNB1AK53 854 aa8.14□□□□□ -1.11
LINC00393-202ENST00000452852 RAB15P59190 212 aa8.14□□□□□ -1.11
LINC00393-202ENST00000452852 PPP1R26Q5T8A7 1209 aaPredicted RBP8.14□□□□□ -1.11
LINC00393-202ENST00000452852 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
LINC00393-202ENST00000452852 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
LINC00393-202ENST00000452852 GIGYF1O75420 1035 aaPredicted RBP8.13□□□□□ -1.11
LINC00393-202ENST00000452852 BMP1P13497 986 aa8.13□□□□□ -1.11
LINC00393-202ENST00000452852 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
LINC00393-202ENST00000452852 VAC14Q08AM6 782 aa8.13□□□□□ -1.11
LINC00393-202ENST00000452852 EMILIN1Q9Y6C2 1016 aa8.13□□□□□ -1.11
LINC00393-202ENST00000452852 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
LINC00393-202ENST00000452852 DHX9Q08211 1270 aaKnown RBP8.12□□□□□ -1.11
LINC00393-202ENST00000452852 TRIM46Q7Z4K8 759 aa8.12□□□□□ -1.11
LINC00393-202ENST00000452852 ABCC9O60706 1549 aa8.12□□□□□ -1.11
LINC00393-202ENST00000452852 RAD21O60216 631 aa8.11□□□□□ -1.11
LINC00393-202ENST00000452852 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
LINC00393-202ENST00000452852 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
LINC00393-202ENST00000452852 ERVH48-1M5A8F1 160 aa8.1□□□□□ -1.11
LINC00393-202ENST00000452852 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
LINC00393-202ENST00000452852 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
LINC00393-202ENST00000452852 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
LINC00393-202ENST00000452852 H3BM21 787 aa8.09□□□□□ -1.11
LINC00393-202ENST00000452852 GDF11O95390 407 aa8.09□□□□□ -1.11
LINC00393-202ENST00000452852 VEGFBP49765 207 aa8.09□□□□□ -1.11
LINC00393-202ENST00000452852 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC00393-202ENST00000452852 CBLBQ13191 982 aa8.09□□□□□ -1.11
LINC00393-202ENST00000452852 MRPL14Q6P1L8 145 aaKnown RBP8.09□□□□□ -1.11
LINC00393-202ENST00000452852 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
LINC00393-202ENST00000452852 MEIOBQ8N635 442 aa8.08□□□□□ -1.12
LINC00393-202ENST00000452852 ZNF784Q8NCA9 323 aaPredicted RBP8.08□□□□□ -1.12
LINC00393-202ENST00000452852 CLUAP1Q96AJ1 413 aa8.07□□□□□ -1.12
LINC00393-202ENST00000452852 ZFP42Q96MM3 310 aa8.07□□□□□ -1.12
LINC00393-202ENST00000452852 PURBQ96QR8 312 aaKnown RBP8.07□□□□□ -1.12
LINC00393-202ENST00000452852 SCARF1Q14162 830 aa8.06□□□□□ -1.12
LINC00393-202ENST00000452852 C6orf118Q5T5N4 469 aa8.06□□□□□ -1.12
LINC00393-202ENST00000452852 RNF20Q5VTR2 975 aa8.06□□□□□ -1.12
LINC00393-202ENST00000452852 Q6ZVU0 165 aa8.06□□□□□ -1.12
LINC00393-202ENST00000452852 WWC1Q8IX03 1113 aa8.06□□□□□ -1.12
LINC00393-202ENST00000452852 RNF225M0QZC1 329 aaPredicted RBP8.05□□□□□ -1.12
LINC00393-202ENST00000452852 LILRA1O75019 489 aa8.05□□□□□ -1.12
LINC00393-202ENST00000452852 ADD1P35611 737 aaKnown RBP8.05□□□□□ -1.12
LINC00393-202ENST00000452852 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
LINC00393-202ENST00000452852 CYLDQ9NQC7 956 aa8.05□□□□□ -1.12
LINC00393-202ENST00000452852 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
LINC00393-202ENST00000452852 UPP2O95045 317 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms