RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 SLIT3O75094 1523 aa16.85■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 ARHGEF25Q86VW2 580 aa16.84■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 PPP1R1BQ9UD71 204 aaPredicted RBP16.84■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
CHKB-CPT1B-201ENST00000452668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 EXOC5O00471 708 aa16.82■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 TERF2IPQ9NYB0 399 aa16.81■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 AXIN2Q9Y2T1 843 aa16.81■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 PIK3C2AO00443 1686 aa16.81■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 SPON1Q9HCB6 807 aa16.8■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 CCDC7Q96M83 1385 aa16.79■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 SBNO2Q9Y2G9 1366 aa16.79■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 PLSCR1O15162 318 aa16.79■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 NLRP2Q9NX02 1062 aa16.77■□□□□ 0.28
CHKB-CPT1B-201ENST00000452668 KCNQ2O43526 872 aa16.76■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 MARCH10Q8NA82 808 aaPredicted RBP16.76■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 RREB1Q92766 1687 aa16.75■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 NME9Q86XW9 330 aa16.75■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 SLC12A5Q9H2X9 1139 aa16.73■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 STK32BQ9NY57 414 aa16.73■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 ABCC6O95255 1503 aa16.73■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 COL18A1P39060 1754 aa16.73■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 IL2RBP14784 551 aa16.72■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 BCL9O00512 1426 aa16.71■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 NFAT5O94916 1531 aa16.71■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 ANKRD24Q8TF21 1146 aa16.71■□□□□ 0.27
CHKB-CPT1B-201ENST00000452668 ERBB3P21860 1342 aa16.7■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 MON2Q7Z3U7 1717 aa16.7■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 TXNRD1Q16881 649 aa16.69■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 COG3Q96JB2 828 aa16.69■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 RGPD3A6NKT7 1758 aaPredicted RBP16.68■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 RGPD4Q7Z3J3 1758 aa16.68■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 A0A1W2PP64 1363 aa16.67■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 ACSBG1Q96GR2 724 aa16.67■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 WNK3Q9BYP7 1800 aa16.67■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 AMPHP49418 695 aa16.66■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 SBF2Q86WG5 1849 aa16.66■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 YY1P25490 414 aa16.65■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 IP6K1Q92551 441 aa16.65■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
CHKB-CPT1B-201ENST00000452668 TMF1P82094 1093 aa16.64■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 PROM2Q8N271 834 aa16.64■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 CDCA8Q53HL2 280 aa16.63■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 LTN1O94822 1766 aa16.61■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 TESK2Q96S53 571 aa16.6■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
CHKB-CPT1B-201ENST00000452668 HOXC9P31274 260 aa16.58■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 MAP3K19Q56UN5 1328 aa16.58■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 SMG6Q86US8 1419 aaKnown RBP16.58■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 NHSQ6T4R5 1651 aa16.57■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 PDGFDQ9GZP0 370 aaPredicted RBP16.57■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 ZCRB1Q8TBF4 217 aaKnown RBP16.56■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 USP47Q96K76 1375 aa16.55■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 FAM208AQ9UK61 1670 aaKnown RBP16.55■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 KAT6BQ8WYB5 2073 aa16.55■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 RTL1A6NKG5 1358 aa16.54■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 PTGER2P43116 358 aa16.54■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 CASZ1Q86V15 1759 aa16.54■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 CGNL1Q0VF96 1302 aa16.53■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 POLD1P28340 1107 aa16.53■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 PRIM1P49642 420 aaKnown RBP16.53■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 RRS1Q15050 365 aaKnown RBP16.53■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 ARXQ96QS3 562 aa16.53■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 FHDC1Q9C0D6 1143 aaPredicted RBP16.53■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 TFCP2L1Q9NZI6 479 aa16.53■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 FYB1O15117 783 aa16.52■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 SLC16A10Q8TF71 515 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms