RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 MFSD10Q14728 455 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 SF3A1Q15459 793 aaKnown RBP6.14□□□□□ -1.43
EPHA3-202ENST00000452448 HDGFL1Q5TGJ6 251 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 CLEC4GQ6UXB4 293 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 FAM210AQ96ND0 272 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 ARHGEF10LQ9HCE6 1279 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 ANAPC4Q9UJX5 808 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 LMTK3Q96Q04 1460 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 TRIM6-TRIM34B2RNG4 842 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 COQ9O75208 318 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 ZRANB2O95218 330 aaKnown RBP eCLIP6.13□□□□□ -1.43
EPHA3-202ENST00000452448 ZNF853P0CG23 659 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 MORC4Q8TE76 937 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 NLRP7Q8WX94 980 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 TRIM34Q9BYJ4 488 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 EFCC1Q9HA90 598 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 COG6Q9Y2V7 657 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 CTDP1Q9Y5B0 961 aaPredicted RBP6.13□□□□□ -1.43
EPHA3-202ENST00000452448 GRXCR2A6NFK2 248 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 PAX7P23759 505 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 KCNJ4P48050 445 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 TSR1Q2NL82 804 aaKnown RBP6.13□□□□□ -1.43
EPHA3-202ENST00000452448 MFSD4BQ5TF39 518 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 RPAINQ86UA6 219 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 DDX12PQ92771 950 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 UBA5Q9GZZ9 404 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 NBPF3Q9H094 633 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 SMC4Q9NTJ3 1288 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 CEP126Q9P2H0 1117 aa6.13□□□□□ -1.43
EPHA3-202ENST00000452448 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.12□□□□□ -1.43
EPHA3-202ENST00000452448 EXOC5O00471 708 aa6.12□□□□□ -1.43
EPHA3-202ENST00000452448 NAT1P18440 290 aa6.12□□□□□ -1.43
EPHA3-202ENST00000452448 CACTIN-AS1Q8N1I8 211 aa6.12□□□□□ -1.43
EPHA3-202ENST00000452448 STK10O94804 968 aaKnown RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 LIG1P18858 919 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 NAP1L1P55209 391 aaKnown RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 MCCD1P59942 119 aaPredicted RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 CAMK2BQ13554 666 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 UBXN4Q92575 508 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 NCAPGQ9BPX3 1015 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 SUDS3Q9H7L9 328 aaPredicted RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 GOPCQ9HD26 462 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 GPHNQ9NQX3 736 aaPredicted RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 KIF16BQ96L93 1317 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 SMAPO00193 183 aa6.11□□□□□ -1.43
EPHA3-202ENST00000452448 PES1O00541 588 aaKnown RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 PCMTD1Q96MG8 357 aaPredicted RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 MAGEC2Q9UBF1 373 aaPredicted RBP6.11□□□□□ -1.43
EPHA3-202ENST00000452448 FAM161AQ3B820 660 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 TSPYL1Q9H0U9 437 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 METTL14Q9HCE5 456 aaKnown RBP6.1□□□□□ -1.43
EPHA3-202ENST00000452448 ESPNB1AK53 854 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 ATMINO43313 823 aaPredicted RBP6.1□□□□□ -1.43
EPHA3-202ENST00000452448 ZNF16P17020 682 aaPredicted RBP6.1□□□□□ -1.43
EPHA3-202ENST00000452448 PDE4AP27815 886 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 PMM1Q92871 262 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 GPATCH3Q96I76 525 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 ARPC5LQ9BPX5 153 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 CDCA7Q9BWT1 371 aaPredicted RBP6.1□□□□□ -1.43
EPHA3-202ENST00000452448 VPS8Q8N3P4 1428 aa6.1□□□□□ -1.43
EPHA3-202ENST00000452448 CHD1O14646 1710 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 RFX1P22670 979 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 RBM5P52756 815 aaKnown RBP eCLIP6.09□□□□□ -1.43
EPHA3-202ENST00000452448 BIRC2Q13490 618 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 C8orf37Q96NL8 207 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 PUF60Q9UHX1 559 aaKnown RBP6.09□□□□□ -1.43
EPHA3-202ENST00000452448 EIF4G3O43432 1585 aaKnown RBP6.09□□□□□ -1.43
EPHA3-202ENST00000452448 CLIP1P30622 1438 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 KDM4FA0A1W2PPD8 638 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 GPR37O15354 613 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 POTEIP0CG38 1075 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 APLP1P51693 650 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 PLPP6Q8IY26 295 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 TTC30BQ8N4P2 665 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 SPOCK3Q9BQ16 436 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 DONSONQ9NYP3 566 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 GAPVD1Q14C86 1478 aa6.09□□□□□ -1.43
EPHA3-202ENST00000452448 ERICH4A6NGS2 130 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 CTAGE5O15320 804 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 MICALL1Q8N3F8 863 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 MAF1Q9H063 256 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 IRF2BPLQ9H1B7 796 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 RANBP17Q9H2T7 1088 aaKnown RBP6.08□□□□□ -1.44
EPHA3-202ENST00000452448 TPX2Q9ULW0 747 aaKnown RBP6.08□□□□□ -1.44
EPHA3-202ENST00000452448 MAGI1Q96QZ7 1491 aaPredicted RBP6.08□□□□□ -1.44
EPHA3-202ENST00000452448 KLHL33A6NCF5 533 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 IPO7O95373 1038 aaKnown RBP6.08□□□□□ -1.44
EPHA3-202ENST00000452448 CSB-PGBD3P0DP91 1061 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 TNNT1P13805 278 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 BDNFP23560 247 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 HMGN5P82970 282 aaKnown RBP6.08□□□□□ -1.44
EPHA3-202ENST00000452448 SYNPO2Q9UMS6 1093 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.08□□□□□ -1.44
EPHA3-202ENST00000452448 USTQ9Y2C2 406 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 RUSC2Q8N2Y8 1516 aa6.08□□□□□ -1.44
EPHA3-202ENST00000452448 KIF1CO43896 1103 aaKnown RBP6.07□□□□□ -1.44
EPHA3-202ENST00000452448 FAM200BP0CF97 657 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 GTF2A1P52655 376 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-202ENST00000452448 DPH6Q7L8W6 267 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms