RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 SLC12A5Q9H2X9 1139 aa38.45■■■■□ 3.75
USP42-204ENST00000451154 RGPD5Q99666 1765 aa38.44■■■■□ 3.74
USP42-204ENST00000451154 DDB1Q16531 1140 aa38.42■■■■□ 3.74
USP42-204ENST00000451154 CSB-PGBD3P0DP91 1061 aa38.41■■■■□ 3.74
USP42-204ENST00000451154 MON2Q7Z3U7 1717 aa38.41■■■■□ 3.74
USP42-204ENST00000451154 TRIM26Q12899 539 aaPredicted RBP38.4■■■■□ 3.74
USP42-204ENST00000451154 NME9Q86XW9 330 aa38.4■■■■□ 3.74
USP42-204ENST00000451154 CD163L1Q9NR16 1453 aa38.4■■■■□ 3.74
USP42-204ENST00000451154 HDGFL2Q7Z4V5 671 aaPredicted RBP38.38■■■■□ 3.73
USP42-204ENST00000451154 PARD3Q8TEW0 1356 aa38.38■■■■□ 3.73
USP42-204ENST00000451154 NFAT5O94916 1531 aa38.38■■■■□ 3.73
USP42-204ENST00000451154 CARD10Q9BWT7 1032 aa38.37■■■■□ 3.73
USP42-204ENST00000451154 LRP5O75197 1615 aa38.37■■■■□ 3.73
USP42-204ENST00000451154 C11orf95C9JLR9 678 aaPredicted RBP38.36■■■■□ 3.73
USP42-204ENST00000451154 USP31Q70CQ4 1352 aa38.35■■■■□ 3.73
USP42-204ENST00000451154 OVOS2A0A0G2JMS6 1433 aa38.33■■■■□ 3.73
USP42-204ENST00000451154 OVOS2A0A0J9YW53 1432 aa38.33■■■■□ 3.73
USP42-204ENST00000451154 OVOS2Q6IE36 1432 aa38.33■■■■□ 3.73
USP42-204ENST00000451154 CDCA7Q9BWT1 371 aaPredicted RBP38.33■■■■□ 3.73
USP42-204ENST00000451154 LRRC37A3O60309 1634 aa38.32■■■■□ 3.73
USP42-204ENST00000451154 ST20-MTHFSA0A0A6YYL1 179 aa38.32■■■■□ 3.72
USP42-204ENST00000451154 MARCH10Q8NA82 808 aaPredicted RBP38.31■■■■□ 3.72
USP42-204ENST00000451154 PUS7Q96PZ0 661 aaKnown RBP38.31■■■■□ 3.72
USP42-204ENST00000451154 TERF2IPQ9NYB0 399 aa38.31■■■■□ 3.72
USP42-204ENST00000451154 PEAK1Q9H792 1746 aa38.3■■■■□ 3.72
USP42-204ENST00000451154 TESK2Q96S53 571 aa38.29■■■■□ 3.72
USP42-204ENST00000451154 NBPF14Q5TI25 921 aa38.27■■■■□ 3.72
USP42-204ENST00000451154 PTF1AQ7RTS3 328 aa38.27■■■■□ 3.72
USP42-204ENST00000451154 RREB1Q92766 1687 aa38.27■■■■□ 3.72
USP42-204ENST00000451154 SBF2Q86WG5 1849 aa38.26■■■■□ 3.72
USP42-204ENST00000451154 WNK3Q9BYP7 1800 aa38.26■■■■□ 3.72
USP42-204ENST00000451154 A0A1W2PP64 1363 aa38.26■■■■□ 3.72
USP42-204ENST00000451154 EDC4Q6P2E9 1401 aaKnown RBP38.26■■■■□ 3.72
USP42-204ENST00000451154 EXOC5O00471 708 aa38.24■■■■□ 3.71
USP42-204ENST00000451154 NUP188Q5SRE5 1749 aa38.24■■■■□ 3.71
USP42-204ENST00000451154 BCL11BQ9C0K0 894 aaPredicted RBP38.23■■■■□ 3.71
USP42-204ENST00000451154 USP54Q70EL1 1684 aa38.22■■■■□ 3.71
USP42-204ENST00000451154 CCDC7Q96M83 1385 aa38.21■■■■□ 3.71
USP42-204ENST00000451154 NLRP2Q9NX02 1062 aa38.21■■■■□ 3.71
USP42-204ENST00000451154 PLSCR1O15162 318 aa38.2■■■■□ 3.71
USP42-204ENST00000451154 ABCC6O95255 1503 aa38.2■■■■□ 3.71
USP42-204ENST00000451154 ERBB3P21860 1342 aa38.18■■■■□ 3.7
USP42-204ENST00000451154 LTN1O94822 1766 aa38.18■■■■□ 3.7
USP42-204ENST00000451154 ANKRD24Q8TF21 1146 aa38.16■■■■□ 3.7
USP42-204ENST00000451154 SLC24A1O60721 1099 aa38.15■■■■□ 3.7
USP42-204ENST00000451154 BCL9O00512 1426 aa38.13■■■■□ 3.7
USP42-204ENST00000451154 NINLQ9Y2I6 1382 aa38.12■■■■□ 3.69
USP42-204ENST00000451154 PROM2Q8N271 834 aa38.1■■■■□ 3.69
USP42-204ENST00000451154 IL2RBP14784 551 aa38.08■■■■□ 3.69
USP42-204ENST00000451154 IP6K1Q92551 441 aa38.08■■■■□ 3.69
USP42-204ENST00000451154 KCNQ2O43526 872 aa38.07■■■■□ 3.68
USP42-204ENST00000451154 COG3Q96JB2 828 aa38.07■■■■□ 3.68
USP42-204ENST00000451154 TNS2Q63HR2 1409 aa38.06■■■■□ 3.68
USP42-204ENST00000451154 FBLN1P23142 703 aa38.06■■■■□ 3.68
USP42-204ENST00000451154 LTV1Q96GA3 475 aaPredicted RBP38.06■■■■□ 3.68
USP42-204ENST00000451154 RGPD3A6NKT7 1758 aaPredicted RBP38.05■■■■□ 3.68
USP42-204ENST00000451154 RGPD4Q7Z3J3 1758 aa38.05■■■■□ 3.68
USP42-204ENST00000451154 USP47Q96K76 1375 aa38.05■■■■□ 3.68
USP42-204ENST00000451154 TMF1P82094 1093 aa38.04■■■■□ 3.68
USP42-204ENST00000451154 ANO8Q9HCE9 1232 aaPredicted RBP38.04■■■■□ 3.68
USP42-204ENST00000451154 ACSBG1Q96GR2 724 aa38.03■■■■□ 3.68
USP42-204ENST00000451154 KAT6BQ8WYB5 2073 aa38.02■■■■□ 3.68
USP42-204ENST00000451154 ANKRD36BQ8N2N9 1353 aa38■■■■□ 3.67
USP42-204ENST00000451154 MAP3K19Q56UN5 1328 aa37.99■■■■□ 3.67
USP42-204ENST00000451154 TXNRD1Q16881 649 aa37.99■■■■□ 3.67
USP42-204ENST00000451154 SPON1Q9HCB6 807 aa37.99■■■■□ 3.67
USP42-204ENST00000451154 AMPHP49418 695 aa37.97■■■■□ 3.67
USP42-204ENST00000451154 HOXC9P31274 260 aa37.96■■■■□ 3.67
USP42-204ENST00000451154 FYB1O15117 783 aa37.94■■■■□ 3.66
USP42-204ENST00000451154 PDGFDQ9GZP0 370 aaPredicted RBP37.93■■■■□ 3.66
USP42-204ENST00000451154 GGNBP2Q9H3C7 697 aa37.93■■■■□ 3.66
USP42-204ENST00000451154 PCGF6Q9BYE7 350 aa37.92■■■■□ 3.66
USP42-204ENST00000451154 DDX54Q8TDD1 881 aaKnown RBP37.91■■■■□ 3.66
USP42-204ENST00000451154 PPP1R1BQ9UD71 204 aaPredicted RBP37.91■■■■□ 3.66
USP42-204ENST00000451154 RRS1Q15050 365 aaKnown RBP37.89■■■■□ 3.66
USP42-204ENST00000451154 CDCA8Q53HL2 280 aa37.89■■■■□ 3.66
USP42-204ENST00000451154 STK32BQ9NY57 414 aa37.89■■■■□ 3.66
USP42-204ENST00000451154 NHSQ6T4R5 1651 aa37.88■■■■□ 3.66
USP42-204ENST00000451154 SLC15A2Q16348 729 aa37.85■■■■□ 3.65
USP42-204ENST00000451154 TIMELESSQ9UNS1 1208 aa37.85■■■■□ 3.65
USP42-204ENST00000451154 FAM208AQ9UK61 1670 aaKnown RBP37.83■■■■□ 3.65
USP42-204ENST00000451154 ZBTB7AO95365 584 aa37.83■■■■□ 3.65
USP42-204ENST00000451154 RGPD2P0DJD1 1756 aa37.83■■■■□ 3.65
USP42-204ENST00000451154 CASZ1Q86V15 1759 aa37.81■■■■□ 3.64
USP42-204ENST00000451154 BTAF1O14981 1849 aa37.8■■■■□ 3.64
USP42-204ENST00000451154 CARD14Q9BXL6 1004 aa37.8■■■■□ 3.64
USP42-204ENST00000451154 NBPF6Q5VWK0 638 aa37.78■■■■□ 3.64
USP42-204ENST00000451154 NBPF4Q96M43 638 aa37.78■■■■□ 3.64
USP42-204ENST00000451154 ATF5Q9Y2D1 282 aaPredicted RBP37.78■■■■□ 3.64
USP42-204ENST00000451154 RTL1A6NKG5 1358 aa37.77■■■■□ 3.64
USP42-204ENST00000451154 ZCRB1Q8TBF4 217 aaKnown RBP37.76■■■■□ 3.64
USP42-204ENST00000451154 USHBP1Q8N6Y0 703 aa37.75■■■■□ 3.63
USP42-204ENST00000451154 CLSPNQ9HAW4 1339 aa37.74■■■■□ 3.63
USP42-204ENST00000451154 HSP90AB2PQ58FF8 381 aa37.73■■■■□ 3.63
USP42-204ENST00000451154 LRRC4BQ9NT99 713 aa37.73■■■■□ 3.63
USP42-204ENST00000451154 PRIM1P49642 420 aaKnown RBP37.72■■■■□ 3.63
USP42-204ENST00000451154 SYTL4Q96C24 671 aaPredicted RBP37.72■■■■□ 3.63
USP42-204ENST00000451154 PTGER2P43116 358 aa37.71■■■■□ 3.63
USP42-204ENST00000451154 MEGF6O75095 1541 aa37.71■■■■□ 3.63
USP42-204ENST00000451154 KIF20BQ96Q89 1820 aa37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms