RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
SHANK2-211ENST00000449833 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
SHANK2-211ENST00000449833 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
SHANK2-211ENST00000449833 SMAP1Q8IYB5 467 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-211ENST00000449833 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
SHANK2-211ENST00000449833 FMNL2Q96PY5 1086 aa13.66□□□□□ -0.22
SHANK2-211ENST00000449833 TNMDQ9H2S6 317 aa13.66□□□□□ -0.22
SHANK2-211ENST00000449833 HIP1O00291 1037 aa13.66□□□□□ -0.22
SHANK2-211ENST00000449833 PRDM10Q9NQV6 1147 aa13.66□□□□□ -0.22
SHANK2-211ENST00000449833 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
SHANK2-211ENST00000449833 CCDC148Q8NFR7 591 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 ANKS4BQ8N8V4 417 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 COG3Q96JB2 828 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 ZMAT2Q96NC0 199 aaKnown RBP13.65□□□□□ -0.22
SHANK2-211ENST00000449833 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-211ENST00000449833 MYZAPP0CAP1 466 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 RASSF4Q9H2L5 321 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 PANK3Q9H999 370 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 ELL2O00472 640 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-211ENST00000449833 TUBB4BP68371 445 aa13.65□□□□□ -0.22
SHANK2-211ENST00000449833 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.23
SHANK2-211ENST00000449833 DHX37Q8IY37 1157 aaKnown RBP13.64□□□□□ -0.23
SHANK2-211ENST00000449833 FMNL3Q8IVF7 1028 aa13.64□□□□□ -0.23
SHANK2-211ENST00000449833 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
SHANK2-211ENST00000449833 BMS1Q14692 1282 aaKnown RBP13.64□□□□□ -0.23
SHANK2-211ENST00000449833 CCDC50Q8IVM0 306 aa13.64□□□□□ -0.23
SHANK2-211ENST00000449833 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.23
SHANK2-211ENST00000449833 LNPKQ9C0E8 428 aa13.63□□□□□ -0.23
SHANK2-211ENST00000449833 DESP17661 470 aa13.63□□□□□ -0.23
SHANK2-211ENST00000449833 PAXBP1Q9Y5B6 917 aa13.63□□□□□ -0.23
SHANK2-211ENST00000449833 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
SHANK2-211ENST00000449833 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
SHANK2-211ENST00000449833 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
SHANK2-211ENST00000449833 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-211ENST00000449833 JAKMIP3Q5VZ66 844 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 TMEM132AQ24JP5 1023 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 CCDC6Q16204 474 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 LRCH2Q5VUJ6 765 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 NAP1L3Q99457 506 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-211ENST00000449833 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 EIF2S2P20042 333 aaKnown RBP13.62□□□□□ -0.23
SHANK2-211ENST00000449833 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 USP47Q96K76 1375 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 CUX2O14529 1486 aa13.62□□□□□ -0.23
SHANK2-211ENST00000449833 FIBPO43427 364 aa13.61□□□□□ -0.23
SHANK2-211ENST00000449833 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
SHANK2-211ENST00000449833 KIF5BP33176 963 aa13.61□□□□□ -0.23
SHANK2-211ENST00000449833 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
SHANK2-211ENST00000449833 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
SHANK2-211ENST00000449833 MYCBPQ99417 103 aaPredicted RBP13.61□□□□□ -0.23
SHANK2-211ENST00000449833 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
SHANK2-211ENST00000449833 STK38Q15208 465 aa13.61□□□□□ -0.23
SHANK2-211ENST00000449833 USH1CQ9Y6N9 552 aa13.61□□□□□ -0.23
SHANK2-211ENST00000449833 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
SHANK2-211ENST00000449833 NEMFO60524 1076 aa13.61□□□□□ -0.23
SHANK2-211ENST00000449833 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
SHANK2-211ENST00000449833 NOL3O60936 208 aaKnown RBP13.6□□□□□ -0.23
SHANK2-211ENST00000449833 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.237e-7■■■■■ 30.9
SHANK2-211ENST00000449833 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SHANK2-211ENST00000449833 IMMTQ16891 758 aaKnown RBP13.6□□□□□ -0.23
SHANK2-211ENST00000449833 RNF187Q5TA31 235 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-211ENST00000449833 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-211ENST00000449833 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-211ENST00000449833 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
SHANK2-211ENST00000449833 CIZ1Q9ULV3 898 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-211ENST00000449833 DDX23Q9BUQ8 820 aaKnown RBP13.59□□□□□ -0.23
SHANK2-211ENST00000449833 PPP1R12BO60237 982 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-211ENST00000449833 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
SHANK2-211ENST00000449833 ZNF397Q8NF99 534 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-211ENST00000449833 NACADO15069 1562 aa13.59□□□□□ -0.23
SHANK2-211ENST00000449833 NUP133Q8WUM0 1156 aa13.59□□□□□ -0.23
SHANK2-211ENST00000449833 EPB41L2O43491 1005 aaKnown RBP13.59□□□□□ -0.23
SHANK2-211ENST00000449833 EVA1CP58658 441 aa13.58□□□□□ -0.23
SHANK2-211ENST00000449833 KRT85P78386 507 aa13.58□□□□□ -0.23
SHANK2-211ENST00000449833 RIPK4P57078 832 aa13.58□□□□□ -0.24
SHANK2-211ENST00000449833 ME1P48163 572 aa13.58□□□□□ -0.24
SHANK2-211ENST00000449833 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
SHANK2-211ENST00000449833 SMTNL1A8MU46 457 aa13.58□□□□□ -0.24
SHANK2-211ENST00000449833 NEK4P51957 841 aa13.58□□□□□ -0.24
SHANK2-211ENST00000449833 CCDC83Q8IWF9 413 aa13.58□□□□□ -0.24
SHANK2-211ENST00000449833 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-211ENST00000449833 CASQ1P31415 396 aa13.57□□□□□ -0.24
SHANK2-211ENST00000449833 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-211ENST00000449833 TANGO6Q9C0B7 1094 aa13.57□□□□□ -0.24
SHANK2-211ENST00000449833 ARHGAP29Q52LW3 1261 aa13.57□□□□□ -0.24
SHANK2-211ENST00000449833 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 NSRP1Q9H0G5 558 aaKnown RBP13.56□□□□□ -0.24
SHANK2-211ENST00000449833 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 CEBPZQ03701 1054 aaKnown RBP13.56□□□□□ -0.24
SHANK2-211ENST00000449833 AP1ARQ63HQ0 302 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 TAF4BQ92750 862 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 RBBP5Q15291 538 aaKnown RBP13.56□□□□□ -0.24
SHANK2-211ENST00000449833 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
SHANK2-211ENST00000449833 KLHL10Q6JEL2 608 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 APAF1O14727 1248 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 CCDC158Q5M9N0 1113 aa13.56□□□□□ -0.24
SHANK2-211ENST00000449833 A6NNZ2 444 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms