RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 RGS20O76081 388 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 ADAMTS2O95450 1211 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 ABCC5O15440 1437 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 UNC13BO14795 1591 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 ARHGEF5Q12774 1597 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 CEP152O94986 1710 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 ROCK1Q13464 1354 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 ANKRD30AQ9BXX3 1397 aa11.91□□□□□ -0.5
NPHP1-208ENST00000449600 PDE4AP27815 886 aa11.9□□□□□ -0.5
NPHP1-208ENST00000449600 ZDHHC16Q969W1 377 aa11.9□□□□□ -0.5
NPHP1-208ENST00000449600 RRP7BPQ9NSQ0 103 aa11.9□□□□□ -0.5
NPHP1-208ENST00000449600 RAB3GAP2Q9H2M9 1393 aa11.9□□□□□ -0.5
NPHP1-208ENST00000449600 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
NPHP1-208ENST00000449600 ZFYVE9O95405 1425 aa11.89□□□□□ -0.51
NPHP1-208ENST00000449600 MST1RQ04912 1400 aa11.89□□□□□ -0.51
NPHP1-208ENST00000449600 WNT2BQ93097 391 aa11.89□□□□□ -0.51
NPHP1-208ENST00000449600 ADGRB3O60242 1522 aa11.89□□□□□ -0.51
NPHP1-208ENST00000449600 A0A0G2JS52 829 aa11.88□□□□□ -0.51
NPHP1-208ENST00000449600 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
NPHP1-208ENST00000449600 SPHKAPQ2M3C7 1700 aa11.87□□□□□ -0.51
NPHP1-208ENST00000449600 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
NPHP1-208ENST00000449600 GJD4Q96KN9 370 aaPredicted RBP11.87□□□□□ -0.51
NPHP1-208ENST00000449600 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
NPHP1-208ENST00000449600 BCANQ96GW7 911 aa11.86□□□□□ -0.51
NPHP1-208ENST00000449600 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
NPHP1-208ENST00000449600 MFSD10Q14728 455 aa11.85□□□□□ -0.51
NPHP1-208ENST00000449600 SLC52A1Q9NWF4 448 aa11.85□□□□□ -0.51
NPHP1-208ENST00000449600 LAMC1P11047 1609 aa11.85□□□□□ -0.51
NPHP1-208ENST00000449600 NOS1P29475 1434 aa11.85□□□□□ -0.51
NPHP1-208ENST00000449600 NAIPQ13075 1403 aa11.85□□□□□ -0.51
NPHP1-208ENST00000449600 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
NPHP1-208ENST00000449600 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
NPHP1-208ENST00000449600 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
NPHP1-208ENST00000449600 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
NPHP1-208ENST00000449600 ADAMTS13Q76LX8 1427 aa11.84□□□□□ -0.51
NPHP1-208ENST00000449600 LMTK2Q8IWU2 1503 aa11.83□□□□□ -0.52
NPHP1-208ENST00000449600 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
NPHP1-208ENST00000449600 HDGFP51858 240 aaKnown RBP11.83□□□□□ -0.52
NPHP1-208ENST00000449600 DDX27Q96GQ7 796 aaKnown RBP11.83□□□□□ -0.52
NPHP1-208ENST00000449600 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
NPHP1-208ENST00000449600 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
NPHP1-208ENST00000449600 DUOX2Q9NRD8 1548 aa11.82□□□□□ -0.52
NPHP1-208ENST00000449600 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
NPHP1-208ENST00000449600 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
NPHP1-208ENST00000449600 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
NPHP1-208ENST00000449600 CEP350Q5VT06 3117 aa11.81□□□□□ -0.52
NPHP1-208ENST00000449600 PPP1R3GB7ZBB8 358 aa11.81□□□□□ -0.52
NPHP1-208ENST00000449600 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
NPHP1-208ENST00000449600 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
NPHP1-208ENST00000449600 COL22A1Q8NFW1 1626 aaPredicted RBP11.81□□□□□ -0.52
NPHP1-208ENST00000449600 MYOM2P54296 1465 aa11.81□□□□□ -0.52
NPHP1-208ENST00000449600 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
NPHP1-208ENST00000449600 DHX57Q6P158 1386 aaKnown RBP11.8□□□□□ -0.52
NPHP1-208ENST00000449600 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
NPHP1-208ENST00000449600 RIMS2Q9UQ26 1411 aa11.8□□□□□ -0.52
NPHP1-208ENST00000449600 BAG6P46379 1132 aa11.8□□□□□ -0.52
NPHP1-208ENST00000449600 RALGAPBQ86X10 1494 aa11.8□□□□□ -0.52
NPHP1-208ENST00000449600 TRPM2O94759 1503 aa11.8□□□□□ -0.52
NPHP1-208ENST00000449600 GLI3P10071 1580 aa11.79□□□□□ -0.52
NPHP1-208ENST00000449600 ERBINQ96RT1 1412 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 ANKRD50Q9ULJ7 1429 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.78□□□□□ -0.52
NPHP1-208ENST00000449600 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
NPHP1-208ENST00000449600 COL9A1P20849 921 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 C1QTNF8P60827 252 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 R3HDM1Q15032 1099 aaKnown RBP11.78□□□□□ -0.52
NPHP1-208ENST00000449600 PROX2Q3B8N5 592 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
NPHP1-208ENST00000449600 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
NPHP1-208ENST00000449600 PTPRUQ92729 1446 aa11.77□□□□□ -0.52
NPHP1-208ENST00000449600 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.77□□□□□ -0.53
NPHP1-208ENST00000449600 IRX2Q9BZI1 471 aaPredicted RBP11.77□□□□□ -0.53
NPHP1-208ENST00000449600 ITGBL1O95965 494 aaPredicted RBP11.76□□□□□ -0.53
NPHP1-208ENST00000449600 KANK1Q14678 1352 aa11.76□□□□□ -0.53
NPHP1-208ENST00000449600 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
NPHP1-208ENST00000449600 UTRNP46939 3433 aa11.75□□□□□ -0.53
NPHP1-208ENST00000449600 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
NPHP1-208ENST00000449600 SEPT12Q8IYM1 358 aa11.75□□□□□ -0.53
NPHP1-208ENST00000449600 ADGRL3Q9HAR2 1447 aa11.75□□□□□ -0.53
NPHP1-208ENST00000449600 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
NPHP1-208ENST00000449600 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
NPHP1-208ENST00000449600 SLIT2O94813 1529 aa11.75□□□□□ -0.53
NPHP1-208ENST00000449600 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
NPHP1-208ENST00000449600 TMEM131LA2VDJ0 1609 aa11.74□□□□□ -0.53
NPHP1-208ENST00000449600 XRN1Q8IZH2 1706 aaKnown RBP11.74□□□□□ -0.53
NPHP1-208ENST00000449600 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
NPHP1-208ENST00000449600 KRT27Q7Z3Y8 459 aa11.73□□□□□ -0.53
NPHP1-208ENST00000449600 MPHOSPH9Q99550 1183 aa11.73□□□□□ -0.53
NPHP1-208ENST00000449600 ANKK1Q8NFD2 765 aa11.72□□□□□ -0.53
NPHP1-208ENST00000449600 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
NPHP1-208ENST00000449600 NUP155O75694 1391 aa11.71□□□□□ -0.53
NPHP1-208ENST00000449600 PHF14O94880 888 aa11.71□□□□□ -0.53
NPHP1-208ENST00000449600 BCAMP50895 628 aa11.71□□□□□ -0.53
NPHP1-208ENST00000449600 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
NPHP1-208ENST00000449600 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
NPHP1-208ENST00000449600 FBXW7Q969H0 707 aa11.71□□□□□ -0.53
NPHP1-208ENST00000449600 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms