RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CPDO75976 1380 aa13.4□□□□□ -0.26
CCDC171-203ENST00000449575 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
CCDC171-203ENST00000449575 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
CCDC171-203ENST00000449575 SLIT2O94813 1529 aa13.4□□□□□ -0.26
CCDC171-203ENST00000449575 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
CCDC171-203ENST00000449575 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
CCDC171-203ENST00000449575 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
CCDC171-203ENST00000449575 BCL9LQ86UU0 1499 aa13.39□□□□□ -0.27
CCDC171-203ENST00000449575 MIER1Q8N108 512 aa13.39□□□□□ -0.27
CCDC171-203ENST00000449575 BTG4Q9NY30 223 aa13.39□□□□□ -0.27
CCDC171-203ENST00000449575 NSD2O96028 1365 aa13.39□□□□□ -0.27
CCDC171-203ENST00000449575 FNBP4Q8N3X1 1017 aaPredicted RBP13.38□□□□□ -0.27
CCDC171-203ENST00000449575 NPC1L1Q9UHC9 1359 aa13.37□□□□□ -0.27
CCDC171-203ENST00000449575 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
CCDC171-203ENST00000449575 PPM1GO15355 546 aaPredicted RBP13.37□□□□□ -0.27
CCDC171-203ENST00000449575 USP21Q9UK80 565 aa13.37□□□□□ -0.27
CCDC171-203ENST00000449575 AATKQ6ZMQ8 1374 aa13.36□□□□□ -0.27
CCDC171-203ENST00000449575 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
CCDC171-203ENST00000449575 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
CCDC171-203ENST00000449575 STRN4Q9NRL3 753 aa13.36□□□□□ -0.27
CCDC171-203ENST00000449575 HOXC9P31274 260 aa13.35□□□□□ -0.27
CCDC171-203ENST00000449575 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
CCDC171-203ENST00000449575 COL5A2P05997 1499 aaPredicted RBP13.35□□□□□ -0.27
CCDC171-203ENST00000449575 POTEAQ6S8J7 498 aa13.35□□□□□ -0.27
CCDC171-203ENST00000449575 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
CCDC171-203ENST00000449575 RTN4Q9NQC3 1192 aaKnown RBP13.35□□□□□ -0.27
CCDC171-203ENST00000449575 AMPHP49418 695 aa13.34□□□□□ -0.27
CCDC171-203ENST00000449575 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
CCDC171-203ENST00000449575 LARP1Q6PKG0 1096 aaKnown RBP13.33□□□□□ -0.28
CCDC171-203ENST00000449575 UNC5CLQ8IV45 518 aa13.33□□□□□ -0.28
CCDC171-203ENST00000449575 IP6K1Q92551 441 aa13.33□□□□□ -0.28
CCDC171-203ENST00000449575 PARD3Q8TEW0 1356 aa13.33□□□□□ -0.28
CCDC171-203ENST00000449575 EP400Q96L91 3159 aa13.33□□□□□ -0.28
CCDC171-203ENST00000449575 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
CCDC171-203ENST00000449575 MTHFSP49914 203 aa13.32□□□□□ -0.28
CCDC171-203ENST00000449575 QTRT2Q9H974 415 aaKnown RBP13.32□□□□□ -0.28
CCDC171-203ENST00000449575 GLI3P10071 1580 aa13.32□□□□□ -0.28
CCDC171-203ENST00000449575 FLT4P35916 1363 aa13.31□□□□□ -0.28
CCDC171-203ENST00000449575 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
CCDC171-203ENST00000449575 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
CCDC171-203ENST00000449575 SMG6Q86US8 1419 aaKnown RBP13.31□□□□□ -0.28
CCDC171-203ENST00000449575 ABCC6O95255 1503 aa13.31□□□□□ -0.28
CCDC171-203ENST00000449575 ATRNO75882 1429 aa13.31□□□□□ -0.28
CCDC171-203ENST00000449575 ERBB3P21860 1342 aa13.31□□□□□ -0.28
CCDC171-203ENST00000449575 EVA1CP58658 441 aa13.3□□□□□ -0.28
CCDC171-203ENST00000449575 ANKRD24Q8TF21 1146 aa13.3□□□□□ -0.28
CCDC171-203ENST00000449575 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
CCDC171-203ENST00000449575 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
CCDC171-203ENST00000449575 BLMP54132 1417 aaPredicted RBP13.29□□□□□ -0.28
CCDC171-203ENST00000449575 TSHZ2Q9NRE2 1034 aa13.29□□□□□ -0.28
CCDC171-203ENST00000449575 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
CCDC171-203ENST00000449575 ZNF772Q68DY9 489 aaPredicted RBP13.29□□□□□ -0.28
CCDC171-203ENST00000449575 WDR17Q8IZU2 1322 aa13.29□□□□□ -0.28
CCDC171-203ENST00000449575 INSRP06213 1382 aa13.29□□□□□ -0.28
CCDC171-203ENST00000449575 TRPC5Q9UL62 973 aaPredicted RBP13.28□□□□□ -0.28
CCDC171-203ENST00000449575 CDK12Q9NYV4 1490 aaPredicted RBP13.28□□□□□ -0.28
CCDC171-203ENST00000449575 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
CCDC171-203ENST00000449575 VPS72Q15906 364 aa13.28□□□□□ -0.28
CCDC171-203ENST00000449575 WNK3Q9BYP7 1800 aa13.27□□□□□ -0.28
CCDC171-203ENST00000449575 TOM1L2Q6ZVM7 507 aa13.27□□□□□ -0.28
CCDC171-203ENST00000449575 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.28
CCDC171-203ENST00000449575 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.28
CCDC171-203ENST00000449575 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.28
CCDC171-203ENST00000449575 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.28
CCDC171-203ENST00000449575 FAM208AQ9UK61 1670 aaKnown RBP13.27□□□□□ -0.28
CCDC171-203ENST00000449575 COL3A1P02461 1466 aaPredicted RBP13.27□□□□□ -0.28
CCDC171-203ENST00000449575 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
CCDC171-203ENST00000449575 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
CCDC171-203ENST00000449575 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
CCDC171-203ENST00000449575 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
CCDC171-203ENST00000449575 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
CCDC171-203ENST00000449575 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
CCDC171-203ENST00000449575 CRB1P82279 1406 aa13.27□□□□□ -0.29
CCDC171-203ENST00000449575 NLRP2Q9NX02 1062 aa13.26□□□□□ -0.29
CCDC171-203ENST00000449575 RALBP1Q15311 655 aa13.26□□□□□ -0.29
CCDC171-203ENST00000449575 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
CCDC171-203ENST00000449575 FAM98CQ17RN3 349 aaKnown RBP13.25□□□□□ -0.29
CCDC171-203ENST00000449575 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
CCDC171-203ENST00000449575 EYA1Q99502 592 aa13.24□□□□□ -0.29
CCDC171-203ENST00000449575 IL13P35225 146 aa13.24□□□□□ -0.29
CCDC171-203ENST00000449575 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
CCDC171-203ENST00000449575 RXRBP28702 533 aa13.23□□□□□ -0.29
CCDC171-203ENST00000449575 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
CCDC171-203ENST00000449575 CARD10Q9BWT7 1032 aa13.23□□□□□ -0.29
CCDC171-203ENST00000449575 THSD7AQ9UPZ6 1657 aa13.23□□□□□ -0.29
CCDC171-203ENST00000449575 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
CCDC171-203ENST00000449575 ANP32CO43423 234 aa13.22□□□□□ -0.29
CCDC171-203ENST00000449575 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
CCDC171-203ENST00000449575 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
CCDC171-203ENST00000449575 RGS12O14924 1447 aa13.22□□□□□ -0.29
CCDC171-203ENST00000449575 DIAPH1O60610 1272 aaKnown RBP13.21□□□□□ -0.3
CCDC171-203ENST00000449575 MEGF6O75095 1541 aa13.21□□□□□ -0.3
CCDC171-203ENST00000449575 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
CCDC171-203ENST00000449575 SHANK3Q9BYB0 1731 aa13.2□□□□□ -0.3
CCDC171-203ENST00000449575 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
CCDC171-203ENST00000449575 DISP2A7MBM2 1401 aa13.2□□□□□ -0.3
CCDC171-203ENST00000449575 A0A0G2JS52 829 aa13.2□□□□□ -0.3
CCDC171-203ENST00000449575 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
CCDC171-203ENST00000449575 HMOX1P09601 288 aa13.19□□□□□ -0.3
CCDC171-203ENST00000449575 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms