RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 GYS2P54840 703 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 NBPF9Q3BBW0 867 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
LINC00342-202ENST00000448494 C10orf67Q8IYJ2 551 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 YEATS2Q9ULM3 1422 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 SRPK2P78362 688 aaKnown RBP12.95□□□□□ -0.34
LINC00342-202ENST00000448494 SEMA3FQ13275 785 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
LINC00342-202ENST00000448494 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
LINC00342-202ENST00000448494 SGSM3Q96HU1 749 aa12.94□□□□□ -0.34
LINC00342-202ENST00000448494 TOMM22Q9NS69 142 aa12.94□□□□□ -0.34
LINC00342-202ENST00000448494 BSDC1Q9NW68 430 aaPredicted RBP12.94□□□□□ -0.34
LINC00342-202ENST00000448494 CCDC189A1A4V9 331 aa12.94□□□□□ -0.34
LINC00342-202ENST00000448494 TRDNQ13061 729 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
LINC00342-202ENST00000448494 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 SYAP1Q96A49 352 aaPredicted RBP12.93□□□□□ -0.34
LINC00342-202ENST00000448494 ANKRD36BQ8N2N9 1353 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 TTC36A6NLP5 189 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 PRPF40AO75400 957 aaKnown RBP12.93□□□□□ -0.34
LINC00342-202ENST00000448494 BCAR3O75815 825 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 SETQ01105 290 aaPredicted RBP12.93□□□□□ -0.34
LINC00342-202ENST00000448494 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
LINC00342-202ENST00000448494 TTC31Q49AM3 519 aaPredicted RBP12.93□□□□□ -0.34
LINC00342-202ENST00000448494 RPAINQ86UA6 219 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 SUGP1Q8IWZ8 645 aaKnown RBP12.93□□□□□ -0.34
LINC00342-202ENST00000448494 DRC1Q96MC2 740 aa12.93□□□□□ -0.34
LINC00342-202ENST00000448494 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
LINC00342-202ENST00000448494 PPP1R12AO14974 1030 aaPredicted RBP12.92□□□□□ -0.34
LINC00342-202ENST00000448494 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
LINC00342-202ENST00000448494 RBM6P78332 1123 aaKnown RBP12.92□□□□□ -0.34
LINC00342-202ENST00000448494 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
LINC00342-202ENST00000448494 TRIM66O15016 1216 aa12.92□□□□□ -0.34
LINC00342-202ENST00000448494 SRLQ86TD4 932 aa12.92□□□□□ -0.34
LINC00342-202ENST00000448494 KIF2CQ99661 725 aa12.92□□□□□ -0.34
LINC00342-202ENST00000448494 KIF3CO14782 793 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 ADCY5O95622 1261 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 KRBA2Q6ZNG9 492 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 CCDC112Q8NEF3 446 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 ERCC6L2Q5T890 1561 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
LINC00342-202ENST00000448494 RNF20Q5VTR2 975 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
LINC00342-202ENST00000448494 PCDHB15Q9Y5E8 787 aa12.91□□□□□ -0.34
LINC00342-202ENST00000448494 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
LINC00342-202ENST00000448494 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
LINC00342-202ENST00000448494 RABEP1Q15276 862 aa12.9□□□□□ -0.34
LINC00342-202ENST00000448494 ZKSCAN8Q15776 578 aaPredicted RBP12.9□□□□□ -0.34
LINC00342-202ENST00000448494 LRCH2Q5VUJ6 765 aa12.9□□□□□ -0.34
LINC00342-202ENST00000448494 STK26Q9P289 416 aa12.9□□□□□ -0.34
LINC00342-202ENST00000448494 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
LINC00342-202ENST00000448494 GPS2Q13227 327 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 MAGEA9P43362 315 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 ST7Q9NRC1 585 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 CAMSAP2Q08AD1 1489 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
LINC00342-202ENST00000448494 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
LINC00342-202ENST00000448494 TPM4P67936 248 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
LINC00342-202ENST00000448494 CEP89Q96ST8 783 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 USP25Q9UHP3 1055 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 RRP15Q9Y3B9 282 aaKnown RBP12.88□□□□□ -0.35
LINC00342-202ENST00000448494 KIF13AQ9H1H9 1805 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 CCDC196A0A1B0GTZ2 297 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 ZSCAN26Q16670 478 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 MCTP2Q6DN12 878 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 PANK1Q8TE04 598 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 LCMT1Q9UIC8 334 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 V9GYY5 206 aaPredicted RBP12.88□□□□□ -0.35
LINC00342-202ENST00000448494 KANK1Q14678 1352 aa12.88□□□□□ -0.35
LINC00342-202ENST00000448494 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
LINC00342-202ENST00000448494 IQUBQ8NA54 791 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 KCNF1Q9H3M0 494 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 UHRF1BP1Q6BDS2 1440 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 PER1O15534 1290 aaPredicted RBP12.87□□□□□ -0.35
LINC00342-202ENST00000448494 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 NBPF5PQ86XG9 351 aaPredicted RBP12.87□□□□□ -0.35
LINC00342-202ENST00000448494 FBXO18Q8NFZ0 1043 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
LINC00342-202ENST00000448494 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
LINC00342-202ENST00000448494 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
LINC00342-202ENST00000448494 C11orf91Q3C1V1 193 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 FBXO38Q6PIJ6 1188 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 NEK11Q8NG66 645 aa12.86□□□□□ -0.35
LINC00342-202ENST00000448494 KDM6BO15054 1643 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms