RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SHPRHQ149N8 1683 aa11.43□□□□□ -0.58
SYNPO2-204ENST00000448416 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
SYNPO2-204ENST00000448416 FOXD4L6Q3SYB3 417 aaPredicted RBP11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 FOXD4L3Q6VB84 417 aaPredicted RBP11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 SLFN14P0C7P3 912 aa11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 PPIP5K1Q6PFW1 1433 aa11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 ADAMTS12P58397 1594 aa11.42□□□□□ -0.58
SYNPO2-204ENST00000448416 TIGD1Q96MW7 591 aa11.41□□□□□ -0.58
SYNPO2-204ENST00000448416 DNAJC2Q99543 621 aaKnown RBP11.41□□□□□ -0.58
SYNPO2-204ENST00000448416 CTNNA3Q9UI47 895 aa11.41□□□□□ -0.58
SYNPO2-204ENST00000448416 CEP152O94986 1710 aa11.41□□□□□ -0.58
SYNPO2-204ENST00000448416 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
SYNPO2-204ENST00000448416 MADDQ8WXG6 1647 aa11.41□□□□□ -0.58
SYNPO2-204ENST00000448416 NCBP1Q09161 790 aaKnown RBP11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 GDPD2Q9HCC8 539 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 PYCARDQ9ULZ3 195 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 NOS1P29475 1434 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 ABCC11Q96J66 1382 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 CASC1Q6TDU7 716 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 NSD3Q9BZ95 1437 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 GADD45BO75293 160 aaPredicted RBP11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 BRD1O95696 1058 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 TPRNQ4KMQ1 711 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 RSPH4AQ5TD94 716 aa11.4□□□□□ -0.58
SYNPO2-204ENST00000448416 KDM4AO75164 1064 aa11.4□□□□□ -0.59
SYNPO2-204ENST00000448416 ARHGEF5Q12774 1597 aa11.4□□□□□ -0.59
SYNPO2-204ENST00000448416 PLEKHM2Q8IWE5 1019 aa11.39□□□□□ -0.59
SYNPO2-204ENST00000448416 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
SYNPO2-204ENST00000448416 TPM3P06753 285 aa11.39□□□□□ -0.59
SYNPO2-204ENST00000448416 ATP10AO60312 1499 aa11.39□□□□□ -0.59
SYNPO2-204ENST00000448416 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
SYNPO2-204ENST00000448416 TERF2Q15554 542 aa11.39□□□□□ -0.59
SYNPO2-204ENST00000448416 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
SYNPO2-204ENST00000448416 TMPOP42166 694 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 TTC22Q5TAA0 569 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 SPC24Q8NBT2 197 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 ANKRD36BQ8N2N9 1353 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 NEK4P51957 841 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 TMX3Q96JJ7 454 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 UNC13BO14795 1591 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 GOLGA6L6A8MZA4 724 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 U2SURPO15042 1029 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 ALDH1L2Q3SY69 923 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 CCDC183Q5T5S1 534 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 USP48Q86UV5 1035 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 KCNF1Q9H3M0 494 aa11.38□□□□□ -0.59
SYNPO2-204ENST00000448416 ZNF518AQ6AHZ1 1483 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 MAGI1Q96QZ7 1491 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 ERICH4A6NGS2 130 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 REC8O95072 547 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 CALCOCO1Q9P1Z2 691 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 MORC2Q9Y6X9 1032 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 SMARCA5O60264 1052 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 SLC20A2Q08357 652 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 SYCP1Q15431 976 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 CHMP4AQ9BY43 222 aa11.37□□□□□ -0.59
SYNPO2-204ENST00000448416 SLC12A5Q9H2X9 1139 aa11.36□□□□□ -0.59
SYNPO2-204ENST00000448416 CFAP70Q5T0N1 1121 aa11.36□□□□□ -0.59
SYNPO2-204ENST00000448416 KRT222Q8N1A0 295 aa11.36□□□□□ -0.59
SYNPO2-204ENST00000448416 IFT140Q96RY7 1462 aa11.36□□□□□ -0.59
SYNPO2-204ENST00000448416 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
SYNPO2-204ENST00000448416 IQGAP3Q86VI3 1631 aa11.36□□□□□ -0.59
SYNPO2-204ENST00000448416 C16orf71Q8IYS4 520 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 MX1P20591 662 aa11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 KIF18AQ8NI77 898 aa11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 REREQ9P2R6 1566 aa11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 SMTNL1A8MU46 457 aa11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 NAA30Q147X3 362 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 IL16Q14005 1332 aa11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 SDSP20132 328 aa11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 MCM2P49736 904 aa11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 C16orf45Q96MC5 204 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-204ENST00000448416 CCDC112Q8NEF3 446 aa11.34□□□□□ -0.59
SYNPO2-204ENST00000448416 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
SYNPO2-204ENST00000448416 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 DUOX2Q9NRD8 1548 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 ERC2O15083 957 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 MED14O60244 1454 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 CD109Q6YHK3 1445 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 TNNT1P13805 278 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
SYNPO2-204ENST00000448416 CAPN2P17655 700 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 WDR33Q9C0J8 1336 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 AP5Z1O43299 807 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 IRX3P78415 501 aaPredicted RBP11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 CUL4AQ13619 759 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 PTGS1P23219 599 aa11.32□□□□□ -0.6
SYNPO2-204ENST00000448416 PTPRTO14522 1441 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms