RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ARHGEF25Q86VW2 580 aa40.23■■■■■ 4.03
CBX4-202ENST00000448310 KCNH5Q8NCM2 988 aa40.23■■■■■ 4.03
CBX4-202ENST00000448310 RREB1Q92766 1687 aa40.21■■■■■ 4.03
CBX4-202ENST00000448310 NFAT5O94916 1531 aa40.21■■■■■ 4.03
CBX4-202ENST00000448310 PEAK1Q9H792 1746 aa40.19■■■■■ 4.02
CBX4-202ENST00000448310 WDR17Q8IZU2 1322 aa40.19■■■■■ 4.02
CBX4-202ENST00000448310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP40.18■■■■■ 4.02
CBX4-202ENST00000448310 NUP188Q5SRE5 1749 aa40.18■■■■■ 4.02
CBX4-202ENST00000448310 PARD3Q8TEW0 1356 aa40.18■■■■■ 4.02
CBX4-202ENST00000448310 CD163L1Q9NR16 1453 aa40.17■■■■■ 4.02
CBX4-202ENST00000448310 SBF2Q86WG5 1849 aa40.15■■■■■ 4.02
CBX4-202ENST00000448310 TMC1Q8TDI8 760 aa40.15■■■■■ 4.02
CBX4-202ENST00000448310 DDB1Q16531 1140 aa40.14■■■■■ 4.02
CBX4-202ENST00000448310 OVOS2A0A0G2JMS6 1433 aa40.14■■■■■ 4.02
CBX4-202ENST00000448310 OVOS2A0A0J9YW53 1432 aa40.14■■■■■ 4.02
CBX4-202ENST00000448310 OVOS2Q6IE36 1432 aa40.14■■■■■ 4.02
CBX4-202ENST00000448310 CSB-PGBD3P0DP91 1061 aa40.12■■■■■ 4.01
CBX4-202ENST00000448310 USP54Q70EL1 1684 aa40.11■■■■■ 4.01
CBX4-202ENST00000448310 NME9Q86XW9 330 aa40.1■■■■■ 4.01
CBX4-202ENST00000448310 SLC12A5Q9H2X9 1139 aa40.1■■■■■ 4.01
CBX4-202ENST00000448310 USP31Q70CQ4 1352 aa40.08■■■■■ 4.01
CBX4-202ENST00000448310 CARD10Q9BWT7 1032 aa40.07■■■■■ 4.01
CBX4-202ENST00000448310 LTN1O94822 1766 aa40.07■■■■■ 4
CBX4-202ENST00000448310 C11orf95C9JLR9 678 aaPredicted RBP40.06■■■■■ 4
CBX4-202ENST00000448310 HDGFL2Q7Z4V5 671 aaPredicted RBP40.05■■■■■ 4
CBX4-202ENST00000448310 ABCC6O95255 1503 aa40.04■■■■■ 4
CBX4-202ENST00000448310 MARCH10Q8NA82 808 aaPredicted RBP40.02■■■■■ 4
CBX4-202ENST00000448310 CDCA7Q9BWT1 371 aaPredicted RBP40.02■■■■■ 4
CBX4-202ENST00000448310 EDC4Q6P2E9 1401 aaKnown RBP40■■■■□ 3.99
CBX4-202ENST00000448310 A0A1W2PP64 1363 aa40■■■■□ 3.99
CBX4-202ENST00000448310 PTF1AQ7RTS3 328 aa40■■■■□ 3.99
CBX4-202ENST00000448310 NBPF14Q5TI25 921 aa39.99■■■■□ 3.99
CBX4-202ENST00000448310 RGPD3A6NKT7 1758 aaPredicted RBP39.98■■■■□ 3.99
CBX4-202ENST00000448310 RGPD4Q7Z3J3 1758 aa39.98■■■■□ 3.99
CBX4-202ENST00000448310 TERF2IPQ9NYB0 399 aa39.97■■■■□ 3.99
CBX4-202ENST00000448310 CCDC7Q96M83 1385 aa39.97■■■■□ 3.99
CBX4-202ENST00000448310 TESK2Q96S53 571 aa39.96■■■■□ 3.99
CBX4-202ENST00000448310 ST20-MTHFSA0A0A6YYL1 179 aa39.95■■■■□ 3.99
CBX4-202ENST00000448310 TRIM26Q12899 539 aaPredicted RBP39.94■■■■□ 3.98
CBX4-202ENST00000448310 PUS7Q96PZ0 661 aaKnown RBP39.94■■■■□ 3.98
CBX4-202ENST00000448310 BCL11BQ9C0K0 894 aaPredicted RBP39.93■■■■□ 3.98
CBX4-202ENST00000448310 ERBB3P21860 1342 aa39.92■■■■□ 3.98
CBX4-202ENST00000448310 EXOC5O00471 708 aa39.92■■■■□ 3.98
CBX4-202ENST00000448310 PLSCR1O15162 318 aa39.9■■■■□ 3.98
CBX4-202ENST00000448310 NLRP2Q9NX02 1062 aa39.9■■■■□ 3.98
CBX4-202ENST00000448310 BCL9O00512 1426 aa39.9■■■■□ 3.98
CBX4-202ENST00000448310 TNS2Q63HR2 1409 aa39.89■■■■□ 3.98
CBX4-202ENST00000448310 ANKRD24Q8TF21 1146 aa39.86■■■■□ 3.97
CBX4-202ENST00000448310 NINLQ9Y2I6 1382 aa39.83■■■■□ 3.97
CBX4-202ENST00000448310 ANO8Q9HCE9 1232 aaPredicted RBP39.81■■■■□ 3.96
CBX4-202ENST00000448310 PROM2Q8N271 834 aa39.8■■■■□ 3.96
CBX4-202ENST00000448310 IL2RBP14784 551 aa39.78■■■■□ 3.96
CBX4-202ENST00000448310 NHSQ6T4R5 1651 aa39.77■■■■□ 3.96
CBX4-202ENST00000448310 KCNQ2O43526 872 aa39.77■■■■□ 3.96
CBX4-202ENST00000448310 KAT6BQ8WYB5 2073 aa39.74■■■■□ 3.95
CBX4-202ENST00000448310 USP47Q96K76 1375 aa39.74■■■■□ 3.95
CBX4-202ENST00000448310 IP6K1Q92551 441 aa39.74■■■■□ 3.95
CBX4-202ENST00000448310 ACSBG1Q96GR2 724 aa39.74■■■■□ 3.95
CBX4-202ENST00000448310 SLC24A1O60721 1099 aa39.73■■■■□ 3.95
CBX4-202ENST00000448310 LTV1Q96GA3 475 aaPredicted RBP39.73■■■■□ 3.95
CBX4-202ENST00000448310 COG3Q96JB2 828 aa39.73■■■■□ 3.95
CBX4-202ENST00000448310 FBLN1P23142 703 aa39.72■■■■□ 3.95
CBX4-202ENST00000448310 SPON1Q9HCB6 807 aa39.72■■■■□ 3.95
CBX4-202ENST00000448310 CASZ1Q86V15 1759 aa39.72■■■■□ 3.95
CBX4-202ENST00000448310 ANKRD36BQ8N2N9 1353 aa39.72■■■■□ 3.95
CBX4-202ENST00000448310 FAM208AQ9UK61 1670 aaKnown RBP39.71■■■■□ 3.95
CBX4-202ENST00000448310 TXNRD1Q16881 649 aa39.7■■■■□ 3.95
CBX4-202ENST00000448310 MAP3K19Q56UN5 1328 aa39.68■■■■□ 3.94
CBX4-202ENST00000448310 RGPD2P0DJD1 1756 aa39.67■■■■□ 3.94
CBX4-202ENST00000448310 TMF1P82094 1093 aa39.67■■■■□ 3.94
CBX4-202ENST00000448310 PDGFDQ9GZP0 370 aaPredicted RBP39.67■■■■□ 3.94
CBX4-202ENST00000448310 BTAF1O14981 1849 aa39.66■■■■□ 3.94
CBX4-202ENST00000448310 PPP1R1BQ9UD71 204 aaPredicted RBP39.65■■■■□ 3.94
CBX4-202ENST00000448310 HOXC9P31274 260 aa39.63■■■■□ 3.93
CBX4-202ENST00000448310 AMPHP49418 695 aa39.62■■■■□ 3.93
CBX4-202ENST00000448310 STK32BQ9NY57 414 aa39.6■■■■□ 3.93
CBX4-202ENST00000448310 GGNBP2Q9H3C7 697 aa39.59■■■■□ 3.93
CBX4-202ENST00000448310 KIF20BQ96Q89 1820 aa39.57■■■■□ 3.93
CBX4-202ENST00000448310 FYB1O15117 783 aa39.57■■■■□ 3.93
CBX4-202ENST00000448310 DDX54Q8TDD1 881 aaKnown RBP39.57■■■■□ 3.93
CBX4-202ENST00000448310 ZBTB7AO95365 584 aa39.56■■■■□ 3.92
CBX4-202ENST00000448310 RRS1Q15050 365 aaKnown RBP39.56■■■■□ 3.92
CBX4-202ENST00000448310 SLC15A2Q16348 729 aa39.56■■■■□ 3.92
CBX4-202ENST00000448310 SHANK3Q9BYB0 1731 aa39.52■■■■□ 3.92
CBX4-202ENST00000448310 MYOM1P52179 1685 aa39.51■■■■□ 3.92
CBX4-202ENST00000448310 PAPPAQ13219 1627 aa39.51■■■■□ 3.92
CBX4-202ENST00000448310 RTL1A6NKG5 1358 aa39.5■■■■□ 3.91
CBX4-202ENST00000448310 CDCA8Q53HL2 280 aa39.49■■■■□ 3.91
CBX4-202ENST00000448310 ATF5Q9Y2D1 282 aaPredicted RBP39.49■■■■□ 3.91
CBX4-202ENST00000448310 MEGF6O75095 1541 aa39.48■■■■□ 3.91
CBX4-202ENST00000448310 DOT1LQ8TEK3 1739 aa39.48■■■■□ 3.91
CBX4-202ENST00000448310 PCGF6Q9BYE7 350 aa39.45■■■■□ 3.91
CBX4-202ENST00000448310 PTGER2P43116 358 aa39.44■■■■□ 3.9
CBX4-202ENST00000448310 NBPF6Q5VWK0 638 aa39.44■■■■□ 3.9
CBX4-202ENST00000448310 NBPF4Q96M43 638 aa39.44■■■■□ 3.9
CBX4-202ENST00000448310 USHBP1Q8N6Y0 703 aa39.43■■■■□ 3.9
CBX4-202ENST00000448310 LRRC4BQ9NT99 713 aa39.43■■■■□ 3.9
CBX4-202ENST00000448310 ZCRB1Q8TBF4 217 aaKnown RBP39.41■■■■□ 3.9
CBX4-202ENST00000448310 SYTL4Q96C24 671 aaPredicted RBP39.41■■■■□ 3.9
CBX4-202ENST00000448310 CARD14Q9BXL6 1004 aa39.41■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms