RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 USP35Q9P2H5 1018 aa34.69■■■■□ 3.14
UFD1-204ENST00000447868 AXIN2Q9Y2T1 843 aa34.67■■■■□ 3.14
UFD1-204ENST00000447868 COG3Q96JB2 828 aa34.66■■■■□ 3.14
UFD1-204ENST00000447868 RGPD5Q99666 1765 aa34.65■■■■□ 3.14
UFD1-204ENST00000447868 CARD14Q9BXL6 1004 aa34.64■■■■□ 3.14
UFD1-204ENST00000447868 LTN1O94822 1766 aa34.63■■■■□ 3.13
UFD1-204ENST00000447868 GGNBP2Q9H3C7 697 aa34.62■■■■□ 3.13
UFD1-204ENST00000447868 C11orf95C9JLR9 678 aaPredicted RBP34.61■■■■□ 3.13
UFD1-204ENST00000447868 FYB1O15117 783 aa34.61■■■■□ 3.13
UFD1-204ENST00000447868 NSD3Q9BZ95 1437 aa34.61■■■■□ 3.13
UFD1-204ENST00000447868 KIF20BQ96Q89 1820 aa34.6■■■■□ 3.13
UFD1-204ENST00000447868 KRT27Q7Z3Y8 459 aa34.59■■■■□ 3.13
UFD1-204ENST00000447868 THSD7AQ9UPZ6 1657 aa34.59■■■■□ 3.13
UFD1-204ENST00000447868 CRB1P82279 1406 aa34.58■■■■□ 3.13
UFD1-204ENST00000447868 TCP11L2Q8N4U5 519 aa34.58■■■■□ 3.13
UFD1-204ENST00000447868 TOM1L2Q6ZVM7 507 aa34.57■■■■□ 3.12
UFD1-204ENST00000447868 ABCC6O95255 1503 aa34.56■■■■□ 3.12
UFD1-204ENST00000447868 CSB-PGBD3P0DP91 1061 aa34.56■■■■□ 3.12
UFD1-204ENST00000447868 WDR17Q8IZU2 1322 aa34.55■■■■□ 3.12
UFD1-204ENST00000447868 FBLN1P23142 703 aa34.54■■■■□ 3.12
UFD1-204ENST00000447868 BARGINQ6ZT62 677 aa34.54■■■■□ 3.12
UFD1-204ENST00000447868 THRAP3Q9Y2W1 955 aaKnown RBP34.52■■■■□ 3.12
UFD1-204ENST00000447868 PANK3Q9H999 370 aa34.5■■■■□ 3.11
UFD1-204ENST00000447868 EP400Q96L91 3159 aa34.49■■■■□ 3.11
UFD1-204ENST00000447868 KIF7Q2M1P5 1343 aa34.48■■■■□ 3.11
UFD1-204ENST00000447868 MAP3K19Q56UN5 1328 aa34.48■■■■□ 3.11
UFD1-204ENST00000447868 FAM182BQ5T319 152 aa34.47■■■■□ 3.11
UFD1-204ENST00000447868 CGNL1Q0VF96 1302 aa34.47■■■■□ 3.11
UFD1-204ENST00000447868 IP6K1Q92551 441 aa34.46■■■■□ 3.11
UFD1-204ENST00000447868 RRS1Q15050 365 aaKnown RBP34.45■■■■□ 3.11
UFD1-204ENST00000447868 AMPHP49418 695 aa34.44■■■■□ 3.1
UFD1-204ENST00000447868 ANKRD24Q8TF21 1146 aa34.44■■■■□ 3.1
UFD1-204ENST00000447868 CARD10Q9BWT7 1032 aa34.44■■■■□ 3.1
UFD1-204ENST00000447868 ERBB3P21860 1342 aa34.44■■■■□ 3.1
UFD1-204ENST00000447868 BLMP54132 1417 aaPredicted RBP34.42■■■■□ 3.1
UFD1-204ENST00000447868 HOXC9P31274 260 aa34.41■■■■□ 3.1
UFD1-204ENST00000447868 LTV1Q96GA3 475 aaPredicted RBP34.41■■■■□ 3.1
UFD1-204ENST00000447868 NLRP2Q9NX02 1062 aa34.41■■■■□ 3.1
UFD1-204ENST00000447868 WNK3Q9BYP7 1800 aa34.4■■■■□ 3.1
UFD1-204ENST00000447868 PDE3BQ13370 1112 aa34.4■■■■□ 3.1
UFD1-204ENST00000447868 PARP4Q9UKK3 1724 aaKnown RBP34.4■■■■□ 3.1
UFD1-204ENST00000447868 CCDC125Q86Z20 511 aa34.39■■■■□ 3.1
UFD1-204ENST00000447868 CCDC7Q96M83 1385 aa34.37■■■■□ 3.09
UFD1-204ENST00000447868 RTL1A6NKG5 1358 aa34.35■■■■□ 3.09
UFD1-204ENST00000447868 LRRC37A3O60309 1634 aa34.34■■■■□ 3.09
UFD1-204ENST00000447868 ANKRD26Q9UPS8 1709 aa34.33■■■■□ 3.09
UFD1-204ENST00000447868 DDB1Q16531 1140 aa34.33■■■■□ 3.09
UFD1-204ENST00000447868 CDCA7Q9BWT1 371 aaPredicted RBP34.33■■■■□ 3.09
UFD1-204ENST00000447868 SF3B2Q13435 895 aaKnown RBP34.32■■■■□ 3.08
UFD1-204ENST00000447868 PEAK1Q9H792 1746 aa34.32■■■■□ 3.08
UFD1-204ENST00000447868 DISP2A7MBM2 1401 aa34.3■■■■□ 3.08
UFD1-204ENST00000447868 TNNT2P45379 298 aaPredicted RBP34.3■■■■□ 3.08
UFD1-204ENST00000447868 FAM196AQ6ZSG2 479 aa34.3■■■■□ 3.08
UFD1-204ENST00000447868 KNSTRNQ9Y448 316 aa34.3■■■■□ 3.08
UFD1-204ENST00000447868 EMILIN1Q9Y6C2 1016 aa34.3■■■■□ 3.08
UFD1-204ENST00000447868 FAM208AQ9UK61 1670 aaKnown RBP34.3■■■■□ 3.08
UFD1-204ENST00000447868 WASHC2AQ641Q2 1341 aa34.3■■■■□ 3.08
UFD1-204ENST00000447868 FLT4P35916 1363 aa34.27■■■■□ 3.08
UFD1-204ENST00000447868 PPM1GO15355 546 aaPredicted RBP34.27■■■■□ 3.08
UFD1-204ENST00000447868 HSP90AB2PQ58FF8 381 aa34.27■■■■□ 3.08
UFD1-204ENST00000447868 RGPD2P0DJD1 1756 aa34.26■■■■□ 3.08
UFD1-204ENST00000447868 MAP2P11137 1827 aaKnown RBP34.26■■■■□ 3.08
UFD1-204ENST00000447868 NSD2O96028 1365 aa34.25■■■■□ 3.07
UFD1-204ENST00000447868 KIF24Q5T7B8 1368 aa34.24■■■■□ 3.07
UFD1-204ENST00000447868 RGPD1P0DJD0 1748 aa34.24■■■■□ 3.07
UFD1-204ENST00000447868 IL2RBP14784 551 aa34.24■■■■□ 3.07
UFD1-204ENST00000447868 DEFB132Q7Z7B7 95 aa34.24■■■■□ 3.07
UFD1-204ENST00000447868 INSRP06213 1382 aa34.23■■■■□ 3.07
UFD1-204ENST00000447868 SMG6Q86US8 1419 aaKnown RBP34.23■■■■□ 3.07
UFD1-204ENST00000447868 EXOC5O00471 708 aa34.23■■■■□ 3.07
UFD1-204ENST00000447868 TRIM37O94972 964 aa34.23■■■■□ 3.07
UFD1-204ENST00000447868 MORC1Q86VD1 984 aa34.2■■■■□ 3.07
UFD1-204ENST00000447868 POLKQ9UBT6 870 aa34.2■■■■□ 3.07
UFD1-204ENST00000447868 OVOS2A0A0G2JMS6 1433 aa34.2■■■■□ 3.06
UFD1-204ENST00000447868 MARCH10Q8NA82 808 aaPredicted RBP34.19■■■■□ 3.06
UFD1-204ENST00000447868 NBPF6Q5VWK0 638 aa34.18■■■■□ 3.06
UFD1-204ENST00000447868 NBPF4Q96M43 638 aa34.18■■■■□ 3.06
UFD1-204ENST00000447868 TNS2Q63HR2 1409 aa34.18■■■■□ 3.06
UFD1-204ENST00000447868 TNS1Q9HBL0 1735 aaKnown RBP34.18■■■■□ 3.06
UFD1-204ENST00000447868 BAG6P46379 1132 aa34.17■■■■□ 3.06
UFD1-204ENST00000447868 AMER1Q5JTC6 1135 aaPredicted RBP34.17■■■■□ 3.06
UFD1-204ENST00000447868 USHBP1Q8N6Y0 703 aa34.17■■■■□ 3.06
UFD1-204ENST00000447868 PER1O15534 1290 aaPredicted RBP34.14■■■■□ 3.06
UFD1-204ENST00000447868 EN1Q05925 392 aaPredicted RBP34.11■■■■□ 3.05
UFD1-204ENST00000447868 SBF2Q86WG5 1849 aa34.1■■■■□ 3.05
UFD1-204ENST00000447868 CC2D1BQ5T0F9 858 aaKnown RBP34.1■■■■□ 3.05
UFD1-204ENST00000447868 APBA3O96018 575 aa34.09■■■■□ 3.05
UFD1-204ENST00000447868 CNGB1Q14028 1251 aaPredicted RBP34.08■■■■□ 3.05
UFD1-204ENST00000447868 MEGF6O75095 1541 aa34.08■■■■□ 3.05
UFD1-204ENST00000447868 DDX54Q8TDD1 881 aaKnown RBP34.04■■■■□ 3.04
UFD1-204ENST00000447868 RAPGEF4Q8WZA2 1011 aa34.04■■■■□ 3.04
UFD1-204ENST00000447868 BCL9O00512 1426 aa34.04■■■■□ 3.04
UFD1-204ENST00000447868 EIF4A2Q14240 407 aaKnown RBP34.02■■■■□ 3.04
UFD1-204ENST00000447868 EZH2Q15910 746 aaKnown RBP34.02■■■■□ 3.04
UFD1-204ENST00000447868 TATP17735 454 aaPredicted RBP34.01■■■■□ 3.03
UFD1-204ENST00000447868 PTF1AQ7RTS3 328 aa34.01■■■■□ 3.03
UFD1-204ENST00000447868 ZCRB1Q8TBF4 217 aaKnown RBP34.01■■■■□ 3.03
UFD1-204ENST00000447868 EYA1Q99502 592 aa34.01■■■■□ 3.03
UFD1-204ENST00000447868 BCL11BQ9C0K0 894 aaPredicted RBP34■■■■□ 3.03
UFD1-204ENST00000447868 ACSBG1Q96GR2 724 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms