RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 POTEBQ6S5H4 581 aa8.81□□□□□ -1
PTPN3-205ENST00000447271 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
PTPN3-205ENST00000447271 A0A0C4DFX4 3053 aa8.81□□□□□ -1
PTPN3-205ENST00000447271 LAMC1P11047 1609 aa8.8□□□□□ -1
PTPN3-205ENST00000447271 CACNA1AO00555 2505 aa8.8□□□□□ -1
PTPN3-205ENST00000447271 CTCFP49711 727 aaPredicted RBP8.8□□□□□ -1
PTPN3-205ENST00000447271 CHGAP10645 457 aaKnown RBP8.79□□□□□ -1
PTPN3-205ENST00000447271 FSTL1Q12841 308 aa8.79□□□□□ -1
PTPN3-205ENST00000447271 NLGN2Q8NFZ4 835 aa8.79□□□□□ -1
PTPN3-205ENST00000447271 PLCH1Q4KWH8 1693 aa8.78□□□□□ -1
PTPN3-205ENST00000447271 PIK3C2BO00750 1634 aa8.78□□□□□ -1
PTPN3-205ENST00000447271 SYCP2Q9BX26 1530 aa8.78□□□□□ -1
PTPN3-205ENST00000447271 NWD2Q9ULI1 1742 aa8.77□□□□□ -1
PTPN3-205ENST00000447271 USP32Q8NFA0 1604 aa8.77□□□□□ -1.01
PTPN3-205ENST00000447271 SNPHO15079 494 aa8.77□□□□□ -1.01
PTPN3-205ENST00000447271 LBX1P52954 281 aa8.77□□□□□ -1.01
PTPN3-205ENST00000447271 C16orf71Q8IYS4 520 aaPredicted RBP8.77□□□□□ -1.01
PTPN3-205ENST00000447271 GCC1Q96CN9 775 aa8.77□□□□□ -1.01
PTPN3-205ENST00000447271 G3V3G9 751 aa8.76□□□□□ -1.01
PTPN3-205ENST00000447271 HABP4Q5JVS0 413 aaKnown RBP8.76□□□□□ -1.01
PTPN3-205ENST00000447271 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
PTPN3-205ENST00000447271 NEXMIFQ5QGS0 1516 aa8.75□□□□□ -1.01
PTPN3-205ENST00000447271 NLRP6P59044 892 aa8.75□□□□□ -1.01
PTPN3-205ENST00000447271 AIDAQ96BJ3 306 aa8.75□□□□□ -1.01
PTPN3-205ENST00000447271 RPRD2Q5VT52 1461 aaKnown RBP8.75□□□□□ -1.01
PTPN3-205ENST00000447271 ADGRB3O60242 1522 aa8.75□□□□□ -1.01
PTPN3-205ENST00000447271 NMRK2Q9NPI5 230 aa8.74□□□□□ -1.01
PTPN3-205ENST00000447271 DHX29Q7Z478 1369 aaKnown RBP8.73□□□□□ -1.01
PTPN3-205ENST00000447271 PPP1R37O75864 691 aa8.73□□□□□ -1.01
PTPN3-205ENST00000447271 UBTFP17480 764 aaKnown RBP8.73□□□□□ -1.01
PTPN3-205ENST00000447271 TULP4Q9NRJ4 1543 aa8.73□□□□□ -1.01
PTPN3-205ENST00000447271 THSD7AQ9UPZ6 1657 aa8.72□□□□□ -1.01
PTPN3-205ENST00000447271 EMP3P54852 163 aa8.72□□□□□ -1.01
PTPN3-205ENST00000447271 STK32BQ9NY57 414 aa8.72□□□□□ -1.01
PTPN3-205ENST00000447271 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.01
PTPN3-205ENST00000447271 CDK11AQ9UQ88 783 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-205ENST00000447271 RGPD3A6NKT7 1758 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-205ENST00000447271 RGPD4Q7Z3J3 1758 aa8.71□□□□□ -1.02
PTPN3-205ENST00000447271 HS3ST6Q96QI5 342 aa8.7□□□□□ -1.02
PTPN3-205ENST00000447271 TAOK2Q9UL54 1235 aa8.7□□□□□ -1.02
PTPN3-205ENST00000447271 CDC42BPAQ5VT25 1732 aa8.7□□□□□ -1.02
PTPN3-205ENST00000447271 PTPN23Q9H3S7 1636 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 FAM205CA6NFA0 338 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 ORAI2Q96SN7 254 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 NOS1P29475 1434 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 CLIP1P30622 1438 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 TROQ12816 1431 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-205ENST00000447271 C1orf167Q5SNV9 1468 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 TRPM2O94759 1503 aa8.69□□□□□ -1.02
PTPN3-205ENST00000447271 NALCNQ8IZF0 1738 aa8.68□□□□□ -1.02
PTPN3-205ENST00000447271 HOXB1P14653 301 aaPredicted RBP8.68□□□□□ -1.02
PTPN3-205ENST00000447271 SLC15A2Q16348 729 aa8.68□□□□□ -1.02
PTPN3-205ENST00000447271 TBX22Q9Y458 520 aa8.68□□□□□ -1.02
PTPN3-205ENST00000447271 ABCA3Q99758 1704 aa8.68□□□□□ -1.02
PTPN3-205ENST00000447271 FXR1P51114 621 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPN3-205ENST00000447271 HAP1P54257 671 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-205ENST00000447271 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
PTPN3-205ENST00000447271 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-205ENST00000447271 NRAPQ86VF7 1730 aa8.66□□□□□ -1.02
PTPN3-205ENST00000447271 PRAG1Q86YV5 1406 aa8.66□□□□□ -1.02
PTPN3-205ENST00000447271 POLD1P28340 1107 aa8.66□□□□□ -1.02
PTPN3-205ENST00000447271 RANGAP1P46060 587 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-205ENST00000447271 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-205ENST00000447271 AMOTL2Q9Y2J4 779 aa8.66□□□□□ -1.02
PTPN3-205ENST00000447271 PLEKHG1Q9ULL1 1385 aa8.65□□□□□ -1.02
PTPN3-205ENST00000447271 C2orf72A6NCS6 295 aa8.65□□□□□ -1.02
PTPN3-205ENST00000447271 PLSCR1O15162 318 aa8.65□□□□□ -1.02
PTPN3-205ENST00000447271 XPCQ01831 940 aaPredicted RBP8.65□□□□□ -1.02
PTPN3-205ENST00000447271 KHSRPQ92945 711 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPN3-205ENST00000447271 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.02
PTPN3-205ENST00000447271 CEP152O94986 1710 aa8.65□□□□□ -1.03
PTPN3-205ENST00000447271 HSPA8P11142 646 aaKnown RBP8.64□□□□□ -1.03
PTPN3-205ENST00000447271 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
PTPN3-205ENST00000447271 GPR153Q6NV75 609 aa8.64□□□□□ -1.03
PTPN3-205ENST00000447271 SMC1BQ8NDV3 1235 aa8.64□□□□□ -1.03
PTPN3-205ENST00000447271 ZNF710Q8N1W2 664 aa8.63□□□□□ -1.03
PTPN3-205ENST00000447271 EHBP1L1Q8N3D4 1523 aa8.63□□□□□ -1.03
PTPN3-205ENST00000447271 SPATA31A5Q5VU36 1347 aa8.62□□□□□ -1.03
PTPN3-205ENST00000447271 SPATA31A7Q8IWB4 1347 aa8.62□□□□□ -1.03
PTPN3-205ENST00000447271 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
PTPN3-205ENST00000447271 SPNS2Q8IVW8 549 aa8.62□□□□□ -1.03
PTPN3-205ENST00000447271 SNX27Q96L92 541 aa8.62□□□□□ -1.03
PTPN3-205ENST00000447271 PXDNQ92626 1479 aa8.62□□□□□ -1.03
PTPN3-205ENST00000447271 FYCO1Q9BQS8 1478 aa8.62□□□□□ -1.03
PTPN3-205ENST00000447271 NPHP3Q7Z494 1330 aa8.61□□□□□ -1.03
PTPN3-205ENST00000447271 PMFBP1Q8TBY8 1022 aa8.61□□□□□ -1.03
PTPN3-205ENST00000447271 ADGRL2O95490 1459 aa8.61□□□□□ -1.03
PTPN3-205ENST00000447271 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
PTPN3-205ENST00000447271 TOPAZ1Q8N9V7 1692 aa8.6□□□□□ -1.03
PTPN3-205ENST00000447271 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
PTPN3-205ENST00000447271 WBP1LQ9NX94 342 aa8.6□□□□□ -1.03
PTPN3-205ENST00000447271 BTG4Q9NY30 223 aa8.6□□□□□ -1.03
PTPN3-205ENST00000447271 ADAMTS7Q9UKP4 1686 aa8.59□□□□□ -1.03
PTPN3-205ENST00000447271 SOX10P56693 466 aa8.59□□□□□ -1.03
PTPN3-205ENST00000447271 IDI1Q13907 227 aa8.59□□□□□ -1.03
PTPN3-205ENST00000447271 PTPRUQ92729 1446 aa8.59□□□□□ -1.03
PTPN3-205ENST00000447271 KIAA1107Q9UPP5 1409 aa8.59□□□□□ -1.03
PTPN3-205ENST00000447271 CICQ96RK0 1608 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms