RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.42■■□□□ 1.18
SPTLC1P1-201ENST00000447199 TMC1Q8TDI8 760 aa22.42■■□□□ 1.18
SPTLC1P1-201ENST00000447199 EDC4Q6P2E9 1401 aaKnown RBP22.41■■□□□ 1.18
SPTLC1P1-201ENST00000447199 A0A1W2PP64 1363 aa22.41■■□□□ 1.18
SPTLC1P1-201ENST00000447199 TRIM37O94972 964 aa22.41■■□□□ 1.18
SPTLC1P1-201ENST00000447199 NME9Q86XW9 330 aa22.41■■□□□ 1.18
SPTLC1P1-201ENST00000447199 ABCC6O95255 1503 aa22.41■■□□□ 1.18
SPTLC1P1-201ENST00000447199 SOX12O15370 315 aa22.4■■□□□ 1.18
SPTLC1P1-201ENST00000447199 HDGFL2Q7Z4V5 671 aaPredicted RBP22.4■■□□□ 1.18
SPTLC1P1-201ENST00000447199 TOM1L2Q6ZVM7 507 aa22.39■■□□□ 1.17
SPTLC1P1-201ENST00000447199 CAMKK2Q96RR4 588 aa22.38■■□□□ 1.17
SPTLC1P1-201ENST00000447199 TERF2IPQ9NYB0 399 aa22.38■■□□□ 1.17
SPTLC1P1-201ENST00000447199 NINLQ9Y2I6 1382 aa22.38■■□□□ 1.17
SPTLC1P1-201ENST00000447199 LRRC37A3O60309 1634 aa22.36■■□□□ 1.17
SPTLC1P1-201ENST00000447199 SLC24A1O60721 1099 aa22.36■■□□□ 1.17
SPTLC1P1-201ENST00000447199 CARD10Q9BWT7 1032 aa22.36■■□□□ 1.17
SPTLC1P1-201ENST00000447199 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
SPTLC1P1-201ENST00000447199 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
SPTLC1P1-201ENST00000447199 PEAK1Q9H792 1746 aa22.35■■□□□ 1.17
SPTLC1P1-201ENST00000447199 EZH2Q15910 746 aaKnown RBP22.35■■□□□ 1.17
SPTLC1P1-201ENST00000447199 USP47Q96K76 1375 aa22.35■■□□□ 1.17
SPTLC1P1-201ENST00000447199 PARD3Q8TEW0 1356 aa22.34■■□□□ 1.17
SPTLC1P1-201ENST00000447199 RGPD5Q99666 1765 aa22.33■■□□□ 1.17
SPTLC1P1-201ENST00000447199 APBA3O96018 575 aa22.33■■□□□ 1.17
SPTLC1P1-201ENST00000447199 OVOS2A0A0G2JMS6 1433 aa22.32■■□□□ 1.16
SPTLC1P1-201ENST00000447199 WNK3Q9BYP7 1800 aa22.32■■□□□ 1.16
SPTLC1P1-201ENST00000447199 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
SPTLC1P1-201ENST00000447199 DDB1Q16531 1140 aa22.32■■□□□ 1.16
SPTLC1P1-201ENST00000447199 CDCA7Q9BWT1 371 aaPredicted RBP22.32■■□□□ 1.16
SPTLC1P1-201ENST00000447199 TIMELESSQ9UNS1 1208 aa22.32■■□□□ 1.16
SPTLC1P1-201ENST00000447199 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
SPTLC1P1-201ENST00000447199 PSDA5PKW4 1024 aaPredicted RBP22.31■■□□□ 1.16
SPTLC1P1-201ENST00000447199 ERBB3P21860 1342 aa22.31■■□□□ 1.16
SPTLC1P1-201ENST00000447199 CCDC7Q96M83 1385 aa22.3■■□□□ 1.16
SPTLC1P1-201ENST00000447199 CSB-PGBD3P0DP91 1061 aa22.3■■□□□ 1.16
SPTLC1P1-201ENST00000447199 BCL9O00512 1426 aa22.3■■□□□ 1.16
SPTLC1P1-201ENST00000447199 ANKRD36BQ8N2N9 1353 aa22.29■■□□□ 1.16
SPTLC1P1-201ENST00000447199 MARCH10Q8NA82 808 aaPredicted RBP22.28■■□□□ 1.16
SPTLC1P1-201ENST00000447199 TMF1P82094 1093 aa22.27■■□□□ 1.16
SPTLC1P1-201ENST00000447199 LRP5O75197 1615 aa22.27■■□□□ 1.16
SPTLC1P1-201ENST00000447199 RREB1Q92766 1687 aa22.26■■□□□ 1.15
SPTLC1P1-201ENST00000447199 LTN1O94822 1766 aa22.26■■□□□ 1.15
SPTLC1P1-201ENST00000447199 R3HDM1Q15032 1099 aaKnown RBP22.26■■□□□ 1.15
SPTLC1P1-201ENST00000447199 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
SPTLC1P1-201ENST00000447199 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
SPTLC1P1-201ENST00000447199 PTF1AQ7RTS3 328 aa22.23■■□□□ 1.15
SPTLC1P1-201ENST00000447199 ANKRD24Q8TF21 1146 aa22.23■■□□□ 1.15
SPTLC1P1-201ENST00000447199 NUP188Q5SRE5 1749 aa22.23■■□□□ 1.15
SPTLC1P1-201ENST00000447199 IP6K1Q92551 441 aa22.22■■□□□ 1.15
SPTLC1P1-201ENST00000447199 COG3Q96JB2 828 aa22.22■■□□□ 1.15
SPTLC1P1-201ENST00000447199 BCL11BQ9C0K0 894 aaPredicted RBP22.22■■□□□ 1.15
SPTLC1P1-201ENST00000447199 SBF2Q86WG5 1849 aa22.22■■□□□ 1.15
SPTLC1P1-201ENST00000447199 EXOC5O00471 708 aa22.21■■□□□ 1.15
SPTLC1P1-201ENST00000447199 PLSCR1O15162 318 aa22.21■■□□□ 1.15
SPTLC1P1-201ENST00000447199 NLRP2Q9NX02 1062 aa22.21■■□□□ 1.15
SPTLC1P1-201ENST00000447199 FYB1O15117 783 aa22.19■■□□□ 1.14
SPTLC1P1-201ENST00000447199 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
SPTLC1P1-201ENST00000447199 RGPD3A6NKT7 1758 aaPredicted RBP22.19■■□□□ 1.14
SPTLC1P1-201ENST00000447199 RGPD4Q7Z3J3 1758 aa22.19■■□□□ 1.14
SPTLC1P1-201ENST00000447199 FBLN1P23142 703 aa22.18■■□□□ 1.14
SPTLC1P1-201ENST00000447199 CDCA8Q53HL2 280 aa22.18■■□□□ 1.14
SPTLC1P1-201ENST00000447199 IL2RBP14784 551 aa22.17■■□□□ 1.14
SPTLC1P1-201ENST00000447199 HOXC9P31274 260 aa22.16■■□□□ 1.14
SPTLC1P1-201ENST00000447199 MYOM1P52179 1685 aa22.14■■□□□ 1.14
SPTLC1P1-201ENST00000447199 NBPF14Q5TI25 921 aa22.14■■□□□ 1.13
SPTLC1P1-201ENST00000447199 PROM2Q8N271 834 aa22.14■■□□□ 1.13
SPTLC1P1-201ENST00000447199 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.13
SPTLC1P1-201ENST00000447199 RTL1A6NKG5 1358 aa22.13■■□□□ 1.13
SPTLC1P1-201ENST00000447199 CARD14Q9BXL6 1004 aa22.13■■□□□ 1.13
SPTLC1P1-201ENST00000447199 FAM208AQ9UK61 1670 aaKnown RBP22.12■■□□□ 1.13
SPTLC1P1-201ENST00000447199 KCNQ2O43526 872 aa22.12■■□□□ 1.13
SPTLC1P1-201ENST00000447199 AMPHP49418 695 aa22.11■■□□□ 1.13
SPTLC1P1-201ENST00000447199 LTV1Q96GA3 475 aaPredicted RBP22.11■■□□□ 1.13
SPTLC1P1-201ENST00000447199 RRS1Q15050 365 aaKnown RBP22.1■■□□□ 1.13
SPTLC1P1-201ENST00000447199 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
SPTLC1P1-201ENST00000447199 NHSQ6T4R5 1651 aa22.09■■□□□ 1.13
SPTLC1P1-201ENST00000447199 NSD3Q9BZ95 1437 aa22.07■■□□□ 1.12
SPTLC1P1-201ENST00000447199 TXNRD1Q16881 649 aa22.06■■□□□ 1.12
SPTLC1P1-201ENST00000447199 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
SPTLC1P1-201ENST00000447199 KIF20BQ96Q89 1820 aa22.06■■□□□ 1.12
SPTLC1P1-201ENST00000447199 KIF24Q5T7B8 1368 aa22.05■■□□□ 1.12
SPTLC1P1-201ENST00000447199 NBPF6Q5VWK0 638 aa22.04■■□□□ 1.12
SPTLC1P1-201ENST00000447199 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
SPTLC1P1-201ENST00000447199 NBPF4Q96M43 638 aa22.04■■□□□ 1.12
SPTLC1P1-201ENST00000447199 MEGF6O75095 1541 aa22.04■■□□□ 1.12
SPTLC1P1-201ENST00000447199 INSRP06213 1382 aa22.03■■□□□ 1.12
SPTLC1P1-201ENST00000447199 FLT4P35916 1363 aa22.02■■□□□ 1.12
SPTLC1P1-201ENST00000447199 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
SPTLC1P1-201ENST00000447199 DDX54Q8TDD1 881 aaKnown RBP22.01■■□□□ 1.11
SPTLC1P1-201ENST00000447199 RGPD2P0DJD1 1756 aa22.01■■□□□ 1.11
SPTLC1P1-201ENST00000447199 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
SPTLC1P1-201ENST00000447199 EIF4G2P78344 907 aaKnown RBP eCLIP22■■□□□ 1.11
SPTLC1P1-201ENST00000447199 CASZ1Q86V15 1759 aa21.99■■□□□ 1.11
SPTLC1P1-201ENST00000447199 SMG6Q86US8 1419 aaKnown RBP21.99■■□□□ 1.11
SPTLC1P1-201ENST00000447199 ZCRB1Q8TBF4 217 aaKnown RBP21.99■■□□□ 1.11
SPTLC1P1-201ENST00000447199 PDGFDQ9GZP0 370 aaPredicted RBP21.99■■□□□ 1.11
SPTLC1P1-201ENST00000447199 SHANK3Q9BYB0 1731 aa21.99■■□□□ 1.11
SPTLC1P1-201ENST00000447199 USHBP1Q8N6Y0 703 aa21.98■■□□□ 1.11
SPTLC1P1-201ENST00000447199 SPON1Q9HCB6 807 aa21.98■■□□□ 1.11
SPTLC1P1-201ENST00000447199 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms