RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 RXRBP28702 533 aa24.91■■□□□ 1.58
PHTF1-207ENST00000446739 RBM6P78332 1123 aaKnown RBP24.91■■□□□ 1.58
PHTF1-207ENST00000446739 NPC1L1Q9UHC9 1359 aa24.91■■□□□ 1.58
PHTF1-207ENST00000446739 MAP3K19Q56UN5 1328 aa24.9■■□□□ 1.58
PHTF1-207ENST00000446739 EVA1CP58658 441 aa24.9■■□□□ 1.58
PHTF1-207ENST00000446739 STRN4Q9NRL3 753 aa24.9■■□□□ 1.58
PHTF1-207ENST00000446739 FBLN1P23142 703 aa24.89■■□□□ 1.58
PHTF1-207ENST00000446739 GJD4Q96KN9 370 aaPredicted RBP24.89■■□□□ 1.58
PHTF1-207ENST00000446739 AXIN2Q9Y2T1 843 aa24.89■■□□□ 1.58
PHTF1-207ENST00000446739 RTL1A6NKG5 1358 aa24.89■■□□□ 1.57
PHTF1-207ENST00000446739 GLI3P10071 1580 aa24.88■■□□□ 1.57
PHTF1-207ENST00000446739 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
PHTF1-207ENST00000446739 MORC1Q86VD1 984 aa24.88■■□□□ 1.57
PHTF1-207ENST00000446739 CCDC9Q9Y3X0 531 aaKnown RBP24.88■■□□□ 1.57
PHTF1-207ENST00000446739 AMPHP49418 695 aa24.87■■□□□ 1.57
PHTF1-207ENST00000446739 RRS1Q15050 365 aaKnown RBP24.87■■□□□ 1.57
PHTF1-207ENST00000446739 IP6K1Q92551 441 aa24.87■■□□□ 1.57
PHTF1-207ENST00000446739 KIF24Q5T7B8 1368 aa24.87■■□□□ 1.57
PHTF1-207ENST00000446739 CDK12Q9NYV4 1490 aaPredicted RBP24.86■■□□□ 1.57
PHTF1-207ENST00000446739 ZNF316A6NFI3 1004 aaPredicted RBP24.85■■□□□ 1.57
PHTF1-207ENST00000446739 PEAK1Q9H792 1746 aa24.85■■□□□ 1.57
PHTF1-207ENST00000446739 SPATA31A5Q5VU36 1347 aa24.85■■□□□ 1.57
PHTF1-207ENST00000446739 SPATA31A7Q8IWB4 1347 aa24.85■■□□□ 1.57
PHTF1-207ENST00000446739 HOXC9P31274 260 aa24.84■■□□□ 1.57
PHTF1-207ENST00000446739 FAM208AQ9UK61 1670 aaKnown RBP24.84■■□□□ 1.57
PHTF1-207ENST00000446739 WDR17Q8IZU2 1322 aa24.84■■□□□ 1.57
PHTF1-207ENST00000446739 TNNT2P45379 298 aaPredicted RBP24.83■■□□□ 1.57
PHTF1-207ENST00000446739 CC2D1BQ5T0F9 858 aaKnown RBP24.83■■□□□ 1.57
PHTF1-207ENST00000446739 LARP1Q6PKG0 1096 aaKnown RBP24.83■■□□□ 1.57
PHTF1-207ENST00000446739 CRB1P82279 1406 aa24.83■■□□□ 1.57
PHTF1-207ENST00000446739 FLT4P35916 1363 aa24.82■■□□□ 1.56
PHTF1-207ENST00000446739 DDX10Q13206 875 aaKnown RBP24.82■■□□□ 1.56
PHTF1-207ENST00000446739 ERBB3P21860 1342 aa24.82■■□□□ 1.56
PHTF1-207ENST00000446739 SPATA31A1Q5TZJ5 1347 aa24.82■■□□□ 1.56
PHTF1-207ENST00000446739 CSB-PGBD3P0DP91 1061 aa24.81■■□□□ 1.56
PHTF1-207ENST00000446739 EMILIN1Q9Y6C2 1016 aa24.81■■□□□ 1.56
PHTF1-207ENST00000446739 ILDR2Q71H61 639 aa24.8■■□□□ 1.56
PHTF1-207ENST00000446739 POLKQ9UBT6 870 aa24.8■■□□□ 1.56
PHTF1-207ENST00000446739 TOM1L2Q6ZVM7 507 aa24.79■■□□□ 1.56
PHTF1-207ENST00000446739 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
PHTF1-207ENST00000446739 RGS12O14924 1447 aa24.78■■□□□ 1.56
PHTF1-207ENST00000446739 SMG6Q86US8 1419 aaKnown RBP24.78■■□□□ 1.56
PHTF1-207ENST00000446739 INSRP06213 1382 aa24.78■■□□□ 1.56
PHTF1-207ENST00000446739 THRAP3Q9Y2W1 955 aaKnown RBP24.77■■□□□ 1.56
PHTF1-207ENST00000446739 RGPD2P0DJD1 1756 aa24.77■■□□□ 1.56
PHTF1-207ENST00000446739 WNK3Q9BYP7 1800 aa24.77■■□□□ 1.56
PHTF1-207ENST00000446739 PPM1GO15355 546 aaPredicted RBP24.76■■□□□ 1.55
PHTF1-207ENST00000446739 ONECUT3O60422 494 aaPredicted RBP24.76■■□□□ 1.55
PHTF1-207ENST00000446739 TCP11L2Q8N4U5 519 aa24.76■■□□□ 1.55
PHTF1-207ENST00000446739 CARD10Q9BWT7 1032 aa24.76■■□□□ 1.55
PHTF1-207ENST00000446739 USP35Q9P2H5 1018 aa24.76■■□□□ 1.55
PHTF1-207ENST00000446739 CNGB1Q14028 1251 aaPredicted RBP24.75■■□□□ 1.55
PHTF1-207ENST00000446739 HSP90AB2PQ58FF8 381 aa24.75■■□□□ 1.55
PHTF1-207ENST00000446739 THSD7AQ9UPZ6 1657 aa24.75■■□□□ 1.55
PHTF1-207ENST00000446739 BRWD3Q6RI45 1802 aa24.75■■□□□ 1.55
PHTF1-207ENST00000446739 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
PHTF1-207ENST00000446739 BARGINQ6ZT62 677 aa24.74■■□□□ 1.55
PHTF1-207ENST00000446739 LTV1Q96GA3 475 aaPredicted RBP24.74■■□□□ 1.55
PHTF1-207ENST00000446739 NLRP2Q9NX02 1062 aa24.73■■□□□ 1.55
PHTF1-207ENST00000446739 SEPT12Q8IYM1 358 aa24.71■■□□□ 1.55
PHTF1-207ENST00000446739 PARP4Q9UKK3 1724 aaKnown RBP24.7■■□□□ 1.54
PHTF1-207ENST00000446739 A0A0G2JS52 829 aa24.69■■□□□ 1.54
PHTF1-207ENST00000446739 MYT1Q01538 1121 aa24.69■■□□□ 1.54
PHTF1-207ENST00000446739 MTHFSP49914 203 aa24.67■■□□□ 1.54
PHTF1-207ENST00000446739 CDCA7Q9BWT1 371 aaPredicted RBP24.67■■□□□ 1.54
PHTF1-207ENST00000446739 PARD3Q8TEW0 1356 aa24.67■■□□□ 1.54
PHTF1-207ENST00000446739 DISP2A7MBM2 1401 aa24.65■■□□□ 1.54
PHTF1-207ENST00000446739 EIF4A2Q14240 407 aaKnown RBP24.64■■□□□ 1.54
PHTF1-207ENST00000446739 NBPF6Q5VWK0 638 aa24.64■■□□□ 1.54
PHTF1-207ENST00000446739 NBPF4Q96M43 638 aa24.64■■□□□ 1.54
PHTF1-207ENST00000446739 LRRC37A3O60309 1634 aa24.63■■□□□ 1.53
PHTF1-207ENST00000446739 IL2RBP14784 551 aa24.61■■□□□ 1.53
PHTF1-207ENST00000446739 PPP2R1AP30153 589 aa24.61■■□□□ 1.53
PHTF1-207ENST00000446739 RALBP1Q15311 655 aa24.61■■□□□ 1.53
PHTF1-207ENST00000446739 NCAPD2Q15021 1401 aa24.61■■□□□ 1.53
PHTF1-207ENST00000446739 KRT27Q7Z3Y8 459 aa24.6■■□□□ 1.53
PHTF1-207ENST00000446739 EYA1Q99502 592 aa24.59■■□□□ 1.53
PHTF1-207ENST00000446739 RGPD1P0DJD0 1748 aa24.58■■□□□ 1.52
PHTF1-207ENST00000446739 DDB1Q16531 1140 aa24.57■■□□□ 1.52
PHTF1-207ENST00000446739 USHBP1Q8N6Y0 703 aa24.57■■□□□ 1.52
PHTF1-207ENST00000446739 COL3A1P02461 1466 aaPredicted RBP24.57■■□□□ 1.52
PHTF1-207ENST00000446739 TNS2Q63HR2 1409 aa24.56■■□□□ 1.52
PHTF1-207ENST00000446739 IL13P35225 146 aa24.56■■□□□ 1.52
PHTF1-207ENST00000446739 PDE3BQ13370 1112 aa24.56■■□□□ 1.52
PHTF1-207ENST00000446739 CFAP53Q96M91 514 aa24.56■■□□□ 1.52
PHTF1-207ENST00000446739 IGSF1Q8N6C5 1336 aa24.56■■□□□ 1.52
PHTF1-207ENST00000446739 EP400Q96L91 3159 aa24.55■■□□□ 1.52
PHTF1-207ENST00000446739 EXOC5O00471 708 aa24.55■■□□□ 1.52
PHTF1-207ENST00000446739 DIAPH1O60610 1272 aaKnown RBP24.54■■□□□ 1.52
PHTF1-207ENST00000446739 RAPGEF4Q8WZA2 1011 aa24.54■■□□□ 1.52
PHTF1-207ENST00000446739 MEGF6O75095 1541 aa24.54■■□□□ 1.52
PHTF1-207ENST00000446739 OVOS2A0A0G2JMS6 1433 aa24.52■■□□□ 1.52
PHTF1-207ENST00000446739 SOCS7O14512 581 aa24.52■■□□□ 1.52
PHTF1-207ENST00000446739 TATP17735 454 aaPredicted RBP24.52■■□□□ 1.52
PHTF1-207ENST00000446739 PRKRIP1Q9H875 184 aaPredicted RBP24.52■■□□□ 1.52
PHTF1-207ENST00000446739 SHANK3Q9BYB0 1731 aa24.51■■□□□ 1.51
PHTF1-207ENST00000446739 MYBBP1AQ9BQG0 1328 aaKnown RBP24.51■■□□□ 1.51
PHTF1-207ENST00000446739 KAT6BQ8WYB5 2073 aa24.5■■□□□ 1.51
PHTF1-207ENST00000446739 PKD1L3Q7Z443 1732 aa24.5■■□□□ 1.51
PHTF1-207ENST00000446739 PLEKHG2Q9H7P9 1386 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms