RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 EP400Q96L91 3159 aa24.39■■□□□ 1.49
PDCD4-203ENST00000444997 USP31Q70CQ4 1352 aa24.39■■□□□ 1.49
PDCD4-203ENST00000444997 MON2Q7Z3U7 1717 aa24.38■■□□□ 1.49
PDCD4-203ENST00000444997 FAM196AQ6ZSG2 479 aa24.38■■□□□ 1.49
PDCD4-203ENST00000444997 CCER1Q8TC90 406 aaPredicted RBP24.37■■□□□ 1.49
PDCD4-203ENST00000444997 AXIN2Q9Y2T1 843 aa24.37■■□□□ 1.49
PDCD4-203ENST00000444997 A0A1W2PP64 1363 aa24.37■■□□□ 1.49
PDCD4-203ENST00000444997 CSB-PGBD3P0DP91 1061 aa24.36■■□□□ 1.49
PDCD4-203ENST00000444997 CDCA8Q53HL2 280 aa24.36■■□□□ 1.49
PDCD4-203ENST00000444997 WDR17Q8IZU2 1322 aa24.35■■□□□ 1.49
PDCD4-203ENST00000444997 NFAT5O94916 1531 aa24.31■■□□□ 1.48
PDCD4-203ENST00000444997 C11orf95C9JLR9 678 aaPredicted RBP24.3■■□□□ 1.48
PDCD4-203ENST00000444997 COL18A1P39060 1754 aa24.29■■□□□ 1.48
PDCD4-203ENST00000444997 TRIM37O94972 964 aa24.29■■□□□ 1.48
PDCD4-203ENST00000444997 CDCA7Q9BWT1 371 aaPredicted RBP24.29■■□□□ 1.48
PDCD4-203ENST00000444997 CARD10Q9BWT7 1032 aa24.29■■□□□ 1.48
PDCD4-203ENST00000444997 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
PDCD4-203ENST00000444997 COG3Q96JB2 828 aa24.28■■□□□ 1.48
PDCD4-203ENST00000444997 ABCC6O95255 1503 aa24.27■■□□□ 1.48
PDCD4-203ENST00000444997 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
PDCD4-203ENST00000444997 DDB1Q16531 1140 aa24.27■■□□□ 1.48
PDCD4-203ENST00000444997 RGPD1P0DJD0 1748 aa24.26■■□□□ 1.47
PDCD4-203ENST00000444997 USP54Q70EL1 1684 aa24.25■■□□□ 1.47
PDCD4-203ENST00000444997 APBA3O96018 575 aa24.24■■□□□ 1.47
PDCD4-203ENST00000444997 CCDC7Q96M83 1385 aa24.24■■□□□ 1.47
PDCD4-203ENST00000444997 OVOS2A0A0J9YW53 1432 aa24.24■■□□□ 1.47
PDCD4-203ENST00000444997 OVOS2Q6IE36 1432 aa24.24■■□□□ 1.47
PDCD4-203ENST00000444997 PARP4Q9UKK3 1724 aaKnown RBP24.22■■□□□ 1.47
PDCD4-203ENST00000444997 DISP2A7MBM2 1401 aa24.22■■□□□ 1.47
PDCD4-203ENST00000444997 NLRP2Q9NX02 1062 aa24.22■■□□□ 1.47
PDCD4-203ENST00000444997 ERBB3P21860 1342 aa24.21■■□□□ 1.47
PDCD4-203ENST00000444997 OVOS2A0A0G2JMS6 1433 aa24.2■■□□□ 1.46
PDCD4-203ENST00000444997 EXOC5O00471 708 aa24.2■■□□□ 1.46
PDCD4-203ENST00000444997 ANKRD24Q8TF21 1146 aa24.2■■□□□ 1.46
PDCD4-203ENST00000444997 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
PDCD4-203ENST00000444997 IP6K1Q92551 441 aa24.19■■□□□ 1.46
PDCD4-203ENST00000444997 RGPD5Q99666 1765 aa24.18■■□□□ 1.46
PDCD4-203ENST00000444997 AMPHP49418 695 aa24.17■■□□□ 1.46
PDCD4-203ENST00000444997 CAMKK2Q96RR4 588 aa24.17■■□□□ 1.46
PDCD4-203ENST00000444997 PARD3Q8TEW0 1356 aa24.16■■□□□ 1.46
PDCD4-203ENST00000444997 FYB1O15117 783 aa24.16■■□□□ 1.46
PDCD4-203ENST00000444997 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
PDCD4-203ENST00000444997 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
PDCD4-203ENST00000444997 TNS1Q9HBL0 1735 aaKnown RBP24.15■■□□□ 1.46
PDCD4-203ENST00000444997 LRRC37A3O60309 1634 aa24.15■■□□□ 1.46
PDCD4-203ENST00000444997 LTN1O94822 1766 aa24.14■■□□□ 1.46
PDCD4-203ENST00000444997 MARCH10Q8NA82 808 aaPredicted RBP24.14■■□□□ 1.45
PDCD4-203ENST00000444997 MAP3K19Q56UN5 1328 aa24.13■■□□□ 1.45
PDCD4-203ENST00000444997 IL2RBP14784 551 aa24.13■■□□□ 1.45
PDCD4-203ENST00000444997 LTV1Q96GA3 475 aaPredicted RBP24.13■■□□□ 1.45
PDCD4-203ENST00000444997 POLR3GLQ9BT43 218 aa24.13■■□□□ 1.45
PDCD4-203ENST00000444997 PSDA5PKW4 1024 aaPredicted RBP24.12■■□□□ 1.45
PDCD4-203ENST00000444997 HOXC9P31274 260 aa24.12■■□□□ 1.45
PDCD4-203ENST00000444997 HSPA5P11021 654 aaKnown RBP24.1■■□□□ 1.45
PDCD4-203ENST00000444997 FBLN1P23142 703 aa24.1■■□□□ 1.45
PDCD4-203ENST00000444997 BCL11BQ9C0K0 894 aaPredicted RBP24.1■■□□□ 1.45
PDCD4-203ENST00000444997 WNK3Q9BYP7 1800 aa24.1■■□□□ 1.45
PDCD4-203ENST00000444997 CARD14Q9BXL6 1004 aa24.09■■□□□ 1.45
PDCD4-203ENST00000444997 BCL9O00512 1426 aa24.09■■□□□ 1.45
PDCD4-203ENST00000444997 R3HDM1Q15032 1099 aaKnown RBP24.08■■□□□ 1.45
PDCD4-203ENST00000444997 RRS1Q15050 365 aaKnown RBP24.08■■□□□ 1.45
PDCD4-203ENST00000444997 NBPF14Q5TI25 921 aa24.08■■□□□ 1.45
PDCD4-203ENST00000444997 TNS2Q63HR2 1409 aa24.08■■□□□ 1.44
PDCD4-203ENST00000444997 NSD3Q9BZ95 1437 aa24.08■■□□□ 1.44
PDCD4-203ENST00000444997 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
PDCD4-203ENST00000444997 RTL1A6NKG5 1358 aa24.07■■□□□ 1.44
PDCD4-203ENST00000444997 PLSCR1O15162 318 aa24.06■■□□□ 1.44
PDCD4-203ENST00000444997 CGNL1Q0VF96 1302 aa24.04■■□□□ 1.44
PDCD4-203ENST00000444997 SMG6Q86US8 1419 aaKnown RBP24.02■■□□□ 1.44
PDCD4-203ENST00000444997 MYOM1P52179 1685 aa24.02■■□□□ 1.44
PDCD4-203ENST00000444997 FAM208AQ9UK61 1670 aaKnown RBP24■■□□□ 1.43
PDCD4-203ENST00000444997 PTF1AQ7RTS3 328 aa24■■□□□ 1.43
PDCD4-203ENST00000444997 KIF24Q5T7B8 1368 aa24■■□□□ 1.43
PDCD4-203ENST00000444997 KIF20BQ96Q89 1820 aa23.99■■□□□ 1.43
PDCD4-203ENST00000444997 DDX54Q8TDD1 881 aaKnown RBP23.99■■□□□ 1.43
PDCD4-203ENST00000444997 FLT4P35916 1363 aa23.99■■□□□ 1.43
PDCD4-203ENST00000444997 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
PDCD4-203ENST00000444997 INSRP06213 1382 aa23.97■■□□□ 1.43
PDCD4-203ENST00000444997 SBF2Q86WG5 1849 aa23.97■■□□□ 1.43
PDCD4-203ENST00000444997 RREB1Q92766 1687 aa23.96■■□□□ 1.43
PDCD4-203ENST00000444997 PPM1GO15355 546 aaPredicted RBP23.96■■□□□ 1.43
PDCD4-203ENST00000444997 KCNQ2O43526 872 aa23.96■■□□□ 1.43
PDCD4-203ENST00000444997 HSP90AB2PQ58FF8 381 aa23.96■■□□□ 1.43
PDCD4-203ENST00000444997 NBPF6Q5VWK0 638 aa23.96■■□□□ 1.43
PDCD4-203ENST00000444997 NBPF4Q96M43 638 aa23.96■■□□□ 1.43
PDCD4-203ENST00000444997 RAPGEF4Q8WZA2 1011 aa23.95■■□□□ 1.42
PDCD4-203ENST00000444997 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
PDCD4-203ENST00000444997 PANK3Q9H999 370 aa23.94■■□□□ 1.42
PDCD4-203ENST00000444997 EMILIN1Q9Y6C2 1016 aa23.94■■□□□ 1.42
PDCD4-203ENST00000444997 NUP188Q5SRE5 1749 aa23.93■■□□□ 1.42
PDCD4-203ENST00000444997 TXNRD1Q16881 649 aa23.92■■□□□ 1.42
PDCD4-203ENST00000444997 USHBP1Q8N6Y0 703 aa23.92■■□□□ 1.42
PDCD4-203ENST00000444997 RGPD3A6NKT7 1758 aaPredicted RBP23.92■■□□□ 1.42
PDCD4-203ENST00000444997 RGPD4Q7Z3J3 1758 aa23.92■■□□□ 1.42
PDCD4-203ENST00000444997 LRP5O75197 1615 aa23.92■■□□□ 1.42
PDCD4-203ENST00000444997 TATP17735 454 aaPredicted RBP23.91■■□□□ 1.42
PDCD4-203ENST00000444997 PROM2Q8N271 834 aa23.9■■□□□ 1.42
PDCD4-203ENST00000444997 TNNT2P45379 298 aaPredicted RBP23.88■■□□□ 1.41
PDCD4-203ENST00000444997 SRCAPQ6ZRS2 3230 aa23.88■■□□□ 1.41
PDCD4-203ENST00000444997 NHSQ6T4R5 1651 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms