RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
CCNE1-203ENST00000444983 AXIN2Q9Y2T1 843 aa20.32■□□□□ 0.84
CCNE1-203ENST00000444983 BLMP54132 1417 aaPredicted RBP20.31■□□□□ 0.84
CCNE1-203ENST00000444983 CFAP53Q96M91 514 aa20.31■□□□□ 0.84
CCNE1-203ENST00000444983 RGPD5Q99666 1765 aa20.31■□□□□ 0.84
CCNE1-203ENST00000444983 HAP1P54257 671 aaPredicted RBP20.3■□□□□ 0.84
CCNE1-203ENST00000444983 FAM83GA6ND36 823 aa20.29■□□□□ 0.84
CCNE1-203ENST00000444983 IL13P35225 146 aa20.29■□□□□ 0.84
CCNE1-203ENST00000444983 PRDM11Q9NQV5 511 aa20.29■□□□□ 0.84
CCNE1-203ENST00000444983 COL14A1Q05707 1796 aaKnown RBP20.29■□□□□ 0.84
CCNE1-203ENST00000444983 LRP6O75581 1613 aa20.28■□□□□ 0.84
CCNE1-203ENST00000444983 CAMTA1Q9Y6Y1 1673 aa20.28■□□□□ 0.84
CCNE1-203ENST00000444983 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
CCNE1-203ENST00000444983 CHRNA2Q15822 529 aa20.28■□□□□ 0.84
CCNE1-203ENST00000444983 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.84
CCNE1-203ENST00000444983 EIF4A2Q14240 407 aaKnown RBP20.27■□□□□ 0.84
CCNE1-203ENST00000444983 ZBTB7CA1YPR0 619 aa20.25■□□□□ 0.83
CCNE1-203ENST00000444983 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
CCNE1-203ENST00000444983 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
CCNE1-203ENST00000444983 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
CCNE1-203ENST00000444983 ERBB3P21860 1342 aa20.25■□□□□ 0.83
CCNE1-203ENST00000444983 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
CCNE1-203ENST00000444983 ADAMTS2O95450 1211 aa20.23■□□□□ 0.83
CCNE1-203ENST00000444983 PLCH1Q4KWH8 1693 aa20.23■□□□□ 0.83
CCNE1-203ENST00000444983 SLIT2O94813 1529 aa20.22■□□□□ 0.83
CCNE1-203ENST00000444983 ANKRD24Q8TF21 1146 aa20.22■□□□□ 0.83
CCNE1-203ENST00000444983 ADAMTS8Q9UP79 889 aa20.22■□□□□ 0.83
CCNE1-203ENST00000444983 NUDCQ9Y266 331 aa20.21■□□□□ 0.83
CCNE1-203ENST00000444983 NWD2Q9ULI1 1742 aa20.21■□□□□ 0.83
CCNE1-203ENST00000444983 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
CCNE1-203ENST00000444983 FAM208AQ9UK61 1670 aaKnown RBP20.2■□□□□ 0.82
CCNE1-203ENST00000444983 IGSF1Q8N6C5 1336 aa20.2■□□□□ 0.82
CCNE1-203ENST00000444983 NCAPD2Q15021 1401 aa20.2■□□□□ 0.82
CCNE1-203ENST00000444983 NRAPQ86VF7 1730 aa20.2■□□□□ 0.82
CCNE1-203ENST00000444983 EYA1Q99502 592 aa20.19■□□□□ 0.82
CCNE1-203ENST00000444983 BTG4Q9NY30 223 aa20.19■□□□□ 0.82
CCNE1-203ENST00000444983 KDRP35968 1356 aa20.19■□□□□ 0.82
CCNE1-203ENST00000444983 LTV1Q96GA3 475 aaPredicted RBP20.19■□□□□ 0.82
CCNE1-203ENST00000444983 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
CCNE1-203ENST00000444983 NBPF6Q5VWK0 638 aa20.18■□□□□ 0.82
CCNE1-203ENST00000444983 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
CCNE1-203ENST00000444983 FNBP4Q8N3X1 1017 aaPredicted RBP20.18■□□□□ 0.82
CCNE1-203ENST00000444983 NBPF4Q96M43 638 aa20.18■□□□□ 0.82
CCNE1-203ENST00000444983 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCNE1-203ENST00000444983 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
CCNE1-203ENST00000444983 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
CCNE1-203ENST00000444983 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCNE1-203ENST00000444983 BCL9LQ86UU0 1499 aa20.16■□□□□ 0.82
CCNE1-203ENST00000444983 FCHSD2O94868 740 aa20.15■□□□□ 0.82
CCNE1-203ENST00000444983 C8orf37Q96NL8 207 aa20.14■□□□□ 0.81
CCNE1-203ENST00000444983 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
CCNE1-203ENST00000444983 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
CCNE1-203ENST00000444983 AEBP1Q8IUX7 1158 aa20.13■□□□□ 0.81
CCNE1-203ENST00000444983 NGLY1Q96IV0 654 aa20.13■□□□□ 0.81
CCNE1-203ENST00000444983 PLEKHF1Q96S99 279 aa20.13■□□□□ 0.81
CCNE1-203ENST00000444983 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
CCNE1-203ENST00000444983 HMOX1P09601 288 aa20.13■□□□□ 0.81
CCNE1-203ENST00000444983 SULT6B1Q6IMI4 303 aa20.13■□□□□ 0.81
CCNE1-203ENST00000444983 CRB1P82279 1406 aa20.12■□□□□ 0.81
CCNE1-203ENST00000444983 EVA1CP58658 441 aa20.11■□□□□ 0.81
CCNE1-203ENST00000444983 UNC5CLQ8IV45 518 aa20.11■□□□□ 0.81
CCNE1-203ENST00000444983 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
CCNE1-203ENST00000444983 CSB-PGBD3P0DP91 1061 aa20.1■□□□□ 0.81
CCNE1-203ENST00000444983 CARD10Q9BWT7 1032 aa20.1■□□□□ 0.81
CCNE1-203ENST00000444983 NLRP2Q9NX02 1062 aa20.1■□□□□ 0.81
CCNE1-203ENST00000444983 USHBP1Q8N6Y0 703 aa20.1■□□□□ 0.81
CCNE1-203ENST00000444983 MEX3CQ5U5Q3 659 aaKnown RBP20.09■□□□□ 0.81
CCNE1-203ENST00000444983 TOM1L2Q6ZVM7 507 aa20.09■□□□□ 0.81
CCNE1-203ENST00000444983 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
CCNE1-203ENST00000444983 RUNDC1Q96C34 613 aa20.07■□□□□ 0.8
CCNE1-203ENST00000444983 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
CCNE1-203ENST00000444983 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
CCNE1-203ENST00000444983 PHACTR3Q96KR7 559 aa20.07■□□□□ 0.8
CCNE1-203ENST00000444983 USP21Q9UK80 565 aa20.07■□□□□ 0.8
CCNE1-203ENST00000444983 AFF2P51816 1311 aa20.06■□□□□ 0.8
CCNE1-203ENST00000444983 PLEKHG2Q9H7P9 1386 aa20.06■□□□□ 0.8
CCNE1-203ENST00000444983 VPS72Q15906 364 aa20.06■□□□□ 0.8
CCNE1-203ENST00000444983 SPATA31A1Q5TZJ5 1347 aa20.06■□□□□ 0.8
CCNE1-203ENST00000444983 SPATA31A5Q5VU36 1347 aa20.06■□□□□ 0.8
CCNE1-203ENST00000444983 SPATA31A7Q8IWB4 1347 aa20.06■□□□□ 0.8
CCNE1-203ENST00000444983 ILDR1Q86SU0 546 aaPredicted RBP20.05■□□□□ 0.8
CCNE1-203ENST00000444983 MEGF6O75095 1541 aa20.03■□□□□ 0.8
CCNE1-203ENST00000444983 WNK3Q9BYP7 1800 aa20.03■□□□□ 0.8
CCNE1-203ENST00000444983 DISP2A7MBM2 1401 aa20.02■□□□□ 0.8
CCNE1-203ENST00000444983 ATRNO75882 1429 aa20.02■□□□□ 0.8
CCNE1-203ENST00000444983 TCP11L2Q8N4U5 519 aa20.02■□□□□ 0.8
CCNE1-203ENST00000444983 THRAP3Q9Y2W1 955 aaKnown RBP20.02■□□□□ 0.8
CCNE1-203ENST00000444983 PARP4Q9UKK3 1724 aaKnown RBP20.01■□□□□ 0.79
CCNE1-203ENST00000444983 APAF1O14727 1248 aa20.01■□□□□ 0.79
CCNE1-203ENST00000444983 USP35Q9P2H5 1018 aa20■□□□□ 0.79
CCNE1-203ENST00000444983 OVOS2A0A0G2JMS6 1433 aa20■□□□□ 0.79
CCNE1-203ENST00000444983 PKD1L3Q7Z443 1732 aa20■□□□□ 0.79
CCNE1-203ENST00000444983 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
CCNE1-203ENST00000444983 MAPK8IP3Q9UPT6 1336 aa19.99■□□□□ 0.79
CCNE1-203ENST00000444983 IL2RBP14784 551 aa19.99■□□□□ 0.79
CCNE1-203ENST00000444983 BARGINQ6ZT62 677 aa19.99■□□□□ 0.79
CCNE1-203ENST00000444983 RAPGEF4Q8WZA2 1011 aa19.99■□□□□ 0.79
CCNE1-203ENST00000444983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCNE1-203ENST00000444983 GLI3P10071 1580 aa19.98■□□□□ 0.79
CCNE1-203ENST00000444983 TMPOP42166 694 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms