RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TPM4P67936 248 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 CTIFO43310 598 aaKnown RBP5.99□□□□□ -1.45
HERC1-201ENST00000443617 CTNNA3Q9UI47 895 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 KIAA1524Q8TCG1 905 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 ZNF75DP51815 510 aa5.99□□□□□ -1.45
HERC1-201ENST00000443617 SYCP1Q15431 976 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 TNMDQ9H2S6 317 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 CAVIN2O95810 425 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 ARHGEF12Q9NZN5 1544 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 GOLGA6L19H0YKK7 550 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 SRPK2P78362 688 aaKnown RBP5.98□□□□□ -1.45
HERC1-201ENST00000443617 CAMK4Q16566 473 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 SNAPC4Q5SXM2 1469 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 EPRSP07814 1512 aaKnown RBP5.98□□□□□ -1.45
HERC1-201ENST00000443617 UGGT2Q9NYU1 1516 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 NCBP1Q09161 790 aaKnown RBP5.98□□□□□ -1.45
HERC1-201ENST00000443617 PTPN14Q15678 1187 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 NCBP3Q53F19 620 aaKnown RBP5.98□□□□□ -1.45
HERC1-201ENST00000443617 CCDC186Q7Z3E2 898 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 AEBP1Q8IUX7 1158 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 MORC2Q9Y6X9 1032 aaPredicted RBP5.98□□□□□ -1.45
HERC1-201ENST00000443617 FAM200AQ8TCP9 573 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.98□□□□□ -1.45
HERC1-201ENST00000443617 HOMER1Q86YM7 354 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 CREBRFQ8IUR6 639 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 CAMSAP2Q08AD1 1489 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 SLFN14P0C7P3 912 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 OTUD7AQ8TE49 926 aaPredicted RBP5.98□□□□□ -1.45
HERC1-201ENST00000443617 CLIP2Q9UDT6 1046 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 ZBTB22O15209 634 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 SKILP12757 684 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 RILPL2Q969X0 211 aa5.98□□□□□ -1.45
HERC1-201ENST00000443617 PRG4Q92954 1404 aaPredicted RBP5.97□□□□□ -1.45
HERC1-201ENST00000443617 POLR3AO14802 1390 aaPredicted RBP5.97□□□□□ -1.45
HERC1-201ENST00000443617 BECN2A8MW95 431 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 LMOD3Q0VAK6 560 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 UPF3BQ9BZI7 483 aaKnown RBP5.97□□□□□ -1.45
HERC1-201ENST00000443617 DIAPH1O60610 1272 aaKnown RBP5.97□□□□□ -1.45
HERC1-201ENST00000443617 TYRO3Q06418 890 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 CCAR2Q8N163 923 aaKnown RBP5.97□□□□□ -1.45
HERC1-201ENST00000443617 TERF2IPQ9NYB0 399 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 CERS3Q8IU89 383 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 RSPH14Q9UHP6 348 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 GNAI1P63096 354 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 DCTPP1Q9H773 170 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 NSFL1CQ9UNZ2 370 aaKnown RBP5.97□□□□□ -1.45
HERC1-201ENST00000443617 STX6O43752 255 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 HAP1P54257 671 aaPredicted RBP5.97□□□□□ -1.45
HERC1-201ENST00000443617 FAM193AP78312 1265 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 PDCP20941 246 aa5.97□□□□□ -1.45
HERC1-201ENST00000443617 MRPL50Q8N5N7 158 aaKnown RBP5.96□□□□□ -1.45
HERC1-201ENST00000443617 MNS1Q8NEH6 495 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 NAT10Q9H0A0 1025 aaKnown RBP5.96□□□□□ -1.45
HERC1-201ENST00000443617 NUP62CLQ9H1M0 184 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 TRAK1Q9UPV9 953 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 NLRP1Q9C000 1473 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 MBD5Q9P267 1494 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 CFAP70Q5T0N1 1121 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 CCP110O43303 1012 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 FCHSD2O94868 740 aa5.96□□□□□ -1.45
HERC1-201ENST00000443617 KAT6BQ8WYB5 2073 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 GORABQ5T7V8 394 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 UBXN4Q92575 508 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 FANCD2Q9BXW9 1451 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 CTR9Q6PD62 1173 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 CKAP2LQ8IYA6 745 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 CCDC191Q8NCU4 936 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 PHF23Q9BUL5 403 aaPredicted RBP5.96□□□□□ -1.46
HERC1-201ENST00000443617 DEF6Q9H4E7 631 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 TRMT1Q9NXH9 659 aaKnown RBP5.96□□□□□ -1.46
HERC1-201ENST00000443617 NCOA3Q9Y6Q9 1424 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 C16orf71Q8IYS4 520 aaPredicted RBP5.96□□□□□ -1.46
HERC1-201ENST00000443617 EFCC1Q9HA90 598 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 ZBTB7BO15156 539 aaPredicted RBP5.96□□□□□ -1.46
HERC1-201ENST00000443617 CCDC171Q6TFL3 1326 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 CYP2E1P05181 493 aaPredicted RBP5.96□□□□□ -1.46
HERC1-201ENST00000443617 ERO1AQ96HE7 468 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 LIMCH1Q9UPQ0 1083 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 ANAPC15P60006 121 aa5.96□□□□□ -1.46
HERC1-201ENST00000443617 SUPT6HQ7KZ85 1726 aaKnown RBP5.96□□□□□ -1.46
HERC1-201ENST00000443617 VPS37CA5D8V6 355 aaPredicted RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 KLHL34Q8N239 644 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 SH2B1Q9NRF2 756 aaPredicted RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 SLC26A8Q96RN1 970 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.95□□□□□ -1.46
HERC1-201ENST00000443617 V9GYY5 206 aaPredicted RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 ZSCAN22P10073 491 aaPredicted RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 VGFO15240 615 aaPredicted RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 ELF2Q15723 593 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 ARHGAP29Q52LW3 1261 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 ZSCAN25Q6NSZ9 544 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 TMCO3Q6UWJ1 677 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 FILIP1Q7Z7B0 1213 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 GTF3C6Q969F1 213 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 ABCC11Q96J66 1382 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 GNL2Q13823 731 aaKnown RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 GAPVD1Q14C86 1478 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 DHX8Q14562 1220 aaKnown RBP5.95□□□□□ -1.46
HERC1-201ENST00000443617 FBXW7Q969H0 707 aa5.95□□□□□ -1.46
HERC1-201ENST00000443617 THUMPD2Q9BTF0 503 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms