RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 COL18A1P39060 1754 aa10.85□□□□□ -0.67
RPSA-202ENST00000443003 SLIT3O75094 1523 aa10.85□□□□□ -0.67
RPSA-202ENST00000443003 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
RPSA-202ENST00000443003 PTF1AQ7RTS3 328 aa10.85□□□□□ -0.67
RPSA-202ENST00000443003 CABP2Q9NPB3 220 aa10.84□□□□□ -0.67
RPSA-202ENST00000443003 KAT6BQ8WYB5 2073 aa10.83□□□□□ -0.68
RPSA-202ENST00000443003 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
RPSA-202ENST00000443003 SOX12O15370 315 aa10.83□□□□□ -0.68
RPSA-202ENST00000443003 NLRP6P59044 892 aa10.83□□□□□ -0.68
RPSA-202ENST00000443003 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
RPSA-202ENST00000443003 USP6P35125 1406 aa10.83□□□□□ -0.68
RPSA-202ENST00000443003 PLSCR1O15162 318 aa10.82□□□□□ -0.68
RPSA-202ENST00000443003 STAC3Q96MF2 364 aa10.82□□□□□ -0.68
RPSA-202ENST00000443003 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
RPSA-202ENST00000443003 NHSQ6T4R5 1651 aa10.82□□□□□ -0.68
RPSA-202ENST00000443003 AATKQ6ZMQ8 1374 aa10.81□□□□□ -0.68
RPSA-202ENST00000443003 CSB-PGBD3P0DP91 1061 aa10.81□□□□□ -0.68
RPSA-202ENST00000443003 NBPF1Q3BBV0 1214 aa10.81□□□□□ -0.68
RPSA-202ENST00000443003 MARCH10Q8NA82 808 aaPredicted RBP10.81□□□□□ -0.68
RPSA-202ENST00000443003 ZNF784Q8NCA9 323 aaPredicted RBP10.81□□□□□ -0.68
RPSA-202ENST00000443003 STK32BQ9NY57 414 aa10.81□□□□□ -0.68
RPSA-202ENST00000443003 WDR17Q8IZU2 1322 aa10.81□□□□□ -0.68
RPSA-202ENST00000443003 CENPJQ9HC77 1338 aaPredicted RBP10.81□□□□□ -0.68
RPSA-202ENST00000443003 BTAF1O14981 1849 aa10.8□□□□□ -0.68
RPSA-202ENST00000443003 SENP3-EIF4A1A0A087X0R7 540 aa10.8□□□□□ -0.68
RPSA-202ENST00000443003 PTGER2P43116 358 aa10.8□□□□□ -0.68
RPSA-202ENST00000443003 FHDC1Q9C0D6 1143 aaPredicted RBP10.8□□□□□ -0.68
RPSA-202ENST00000443003 TXNRD1Q16881 649 aa10.79□□□□□ -0.68
RPSA-202ENST00000443003 PROM2Q8N271 834 aa10.79□□□□□ -0.68
RPSA-202ENST00000443003 PCGF6Q9BYE7 350 aa10.79□□□□□ -0.68
RPSA-202ENST00000443003 CABP1Q9NZU7 370 aa10.79□□□□□ -0.68
RPSA-202ENST00000443003 AXIN2Q9Y2T1 843 aa10.79□□□□□ -0.68
RPSA-202ENST00000443003 LTN1O94822 1766 aa10.79□□□□□ -0.68
RPSA-202ENST00000443003 TRPM1Q7Z4N2 1603 aa10.79□□□□□ -0.68
RPSA-202ENST00000443003 BRD4O60885 1362 aaPredicted RBP10.78□□□□□ -0.68
RPSA-202ENST00000443003 PAPPAQ13219 1627 aa10.78□□□□□ -0.68
RPSA-202ENST00000443003 SLC15A2Q16348 729 aa10.78□□□□□ -0.68
RPSA-202ENST00000443003 TNS2Q63HR2 1409 aa10.77□□□□□ -0.68
RPSA-202ENST00000443003 ACSBG1Q96GR2 724 aa10.77□□□□□ -0.69
RPSA-202ENST00000443003 SYT17Q9BSW7 474 aa10.77□□□□□ -0.69
RPSA-202ENST00000443003 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
RPSA-202ENST00000443003 MTFR1LQ9H019 292 aa10.77□□□□□ -0.69
RPSA-202ENST00000443003 BCL9O00512 1426 aa10.76□□□□□ -0.69
RPSA-202ENST00000443003 MON2Q7Z3U7 1717 aa10.76□□□□□ -0.69
RPSA-202ENST00000443003 NFAT5O94916 1531 aa10.76□□□□□ -0.69
RPSA-202ENST00000443003 ABCC6O95255 1503 aa10.76□□□□□ -0.69
RPSA-202ENST00000443003 KLHL34Q8N239 644 aa10.76□□□□□ -0.69
RPSA-202ENST00000443003 TUBGCP6Q96RT7 1819 aa10.76□□□□□ -0.69
RPSA-202ENST00000443003 EXOC5O00471 708 aa10.75□□□□□ -0.69
RPSA-202ENST00000443003 CCDC7Q96M83 1385 aa10.75□□□□□ -0.69
RPSA-202ENST00000443003 UTRNP46939 3433 aa10.74□□□□□ -0.69
RPSA-202ENST00000443003 ARHGEF25Q86VW2 580 aa10.74□□□□□ -0.69
RPSA-202ENST00000443003 KCNH5Q8NCM2 988 aa10.74□□□□□ -0.69
RPSA-202ENST00000443003 CARD10Q9BWT7 1032 aa10.74□□□□□ -0.69
RPSA-202ENST00000443003 TTC21BQ7Z4L5 1316 aa10.74□□□□□ -0.69
RPSA-202ENST00000443003 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
RPSA-202ENST00000443003 PELP1Q8IZL8 1130 aaKnown RBP10.73□□□□□ -0.69
RPSA-202ENST00000443003 ARXQ96QS3 562 aa10.73□□□□□ -0.69
RPSA-202ENST00000443003 EVC2Q86UK5 1308 aa10.73□□□□□ -0.69
RPSA-202ENST00000443003 C1QTNF8P60827 252 aa10.72□□□□□ -0.69
RPSA-202ENST00000443003 GPR162Q16538 588 aa10.72□□□□□ -0.69
RPSA-202ENST00000443003 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
RPSA-202ENST00000443003 DOT1LQ8TEK3 1739 aa10.72□□□□□ -0.69
RPSA-202ENST00000443003 ZNF827Q17R98 1081 aa10.71□□□□□ -0.69
RPSA-202ENST00000443003 USP54Q70EL1 1684 aa10.71□□□□□ -0.69
RPSA-202ENST00000443003 KTN1Q86UP2 1357 aaKnown RBP10.71□□□□□ -0.69
RPSA-202ENST00000443003 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.69
RPSA-202ENST00000443003 NLRP2Q9NX02 1062 aa10.71□□□□□ -0.69
RPSA-202ENST00000443003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPSA-202ENST00000443003 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
RPSA-202ENST00000443003 ERBB3P21860 1342 aa10.69□□□□□ -0.7
RPSA-202ENST00000443003 GIGYF1O75420 1035 aaPredicted RBP10.69□□□□□ -0.7
RPSA-202ENST00000443003 IL2RBP14784 551 aa10.69□□□□□ -0.7
RPSA-202ENST00000443003 COL24A1Q17RW2 1714 aa10.69□□□□□ -0.7
RPSA-202ENST00000443003 FAM208AQ9UK61 1670 aaKnown RBP10.69□□□□□ -0.7
RPSA-202ENST00000443003 ROCK2O75116 1388 aaKnown RBP10.68□□□□□ -0.7
RPSA-202ENST00000443003 MAP3K5Q99683 1374 aa10.68□□□□□ -0.7
RPSA-202ENST00000443003 ZNF692Q9BU19 519 aaPredicted RBP10.68□□□□□ -0.7
RPSA-202ENST00000443003 RGPD2P0DJD1 1756 aa10.67□□□□□ -0.7
RPSA-202ENST00000443003 LY75O60449 1722 aa10.67□□□□□ -0.7
RPSA-202ENST00000443003 POLD1P28340 1107 aa10.67□□□□□ -0.7
RPSA-202ENST00000443003 ANKRD24Q8TF21 1146 aa10.67□□□□□ -0.7
RPSA-202ENST00000443003 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
RPSA-202ENST00000443003 KCNQ4P56696 695 aa10.66□□□□□ -0.7
RPSA-202ENST00000443003 NME9Q86XW9 330 aa10.66□□□□□ -0.7
RPSA-202ENST00000443003 SYTL4Q96C24 671 aaPredicted RBP10.66□□□□□ -0.7
RPSA-202ENST00000443003 PNPLA7Q6ZV29 1317 aa10.65□□□□□ -0.7
RPSA-202ENST00000443003 NLGN2Q8NFZ4 835 aa10.65□□□□□ -0.7
RPSA-202ENST00000443003 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
RPSA-202ENST00000443003 L3MBTL2Q969R5 705 aa10.65□□□□□ -0.7
RPSA-202ENST00000443003 TMC1Q8TDI8 760 aa10.64□□□□□ -0.71
RPSA-202ENST00000443003 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
RPSA-202ENST00000443003 LTV1Q96GA3 475 aaPredicted RBP10.64□□□□□ -0.71
RPSA-202ENST00000443003 TFCP2L1Q9NZI6 479 aa10.64□□□□□ -0.71
RPSA-202ENST00000443003 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
RPSA-202ENST00000443003 C5P01031 1676 aa10.63□□□□□ -0.71
RPSA-202ENST00000443003 CLSPNQ9HAW4 1339 aa10.63□□□□□ -0.71
RPSA-202ENST00000443003 CD163L1Q9NR16 1453 aa10.63□□□□□ -0.71
RPSA-202ENST00000443003 SBNO2Q9Y2G9 1366 aa10.63□□□□□ -0.71
RPSA-202ENST00000443003 SLC27A3Q5K4L6 730 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms