RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 HDGFL2Q7Z4V5 671 aaPredicted RBP38.2■■■■□ 3.71
MRPL28-204ENST00000441883 NME9Q86XW9 330 aa38.2■■■■□ 3.71
MRPL28-204ENST00000441883 PARP4Q9UKK3 1724 aaKnown RBP38.18■■■■□ 3.7
MRPL28-204ENST00000441883 WDR17Q8IZU2 1322 aa38.18■■■■□ 3.7
MRPL28-204ENST00000441883 TRIM37O94972 964 aa38.18■■■■□ 3.7
MRPL28-204ENST00000441883 DISP2A7MBM2 1401 aa38.18■■■■□ 3.7
MRPL28-204ENST00000441883 USP54Q70EL1 1684 aa38.17■■■■□ 3.7
MRPL28-204ENST00000441883 TOM1L2Q6ZVM7 507 aa38.17■■■■□ 3.7
MRPL28-204ENST00000441883 TERF2IPQ9NYB0 399 aa38.16■■■■□ 3.7
MRPL28-204ENST00000441883 A0A1W2PP64 1363 aa38.16■■■■□ 3.7
MRPL28-204ENST00000441883 EDC4Q6P2E9 1401 aaKnown RBP38.14■■■■□ 3.7
MRPL28-204ENST00000441883 SLC24A1O60721 1099 aa38.11■■■■□ 3.69
MRPL28-204ENST00000441883 EZH2Q15910 746 aaKnown RBP38.09■■■■□ 3.69
MRPL28-204ENST00000441883 CAMKK2Q96RR4 588 aa38.09■■■■□ 3.69
MRPL28-204ENST00000441883 CARD10Q9BWT7 1032 aa38.08■■■■□ 3.69
MRPL28-204ENST00000441883 ABCC6O95255 1503 aa38.07■■■■□ 3.69
MRPL28-204ENST00000441883 USP47Q96K76 1375 aa38.06■■■■□ 3.68
MRPL28-204ENST00000441883 NINLQ9Y2I6 1382 aa38.06■■■■□ 3.68
MRPL28-204ENST00000441883 APBA3O96018 575 aa38.06■■■■□ 3.68
MRPL28-204ENST00000441883 LRRC37A3O60309 1634 aa38.05■■■■□ 3.68
MRPL28-204ENST00000441883 CSB-PGBD3P0DP91 1061 aa38.05■■■■□ 3.68
MRPL28-204ENST00000441883 WNK3Q9BYP7 1800 aa38.05■■■■□ 3.68
MRPL28-204ENST00000441883 DDB1Q16531 1140 aa38.04■■■■□ 3.68
MRPL28-204ENST00000441883 PCGF6Q9BYE7 350 aa38.04■■■■□ 3.68
MRPL28-204ENST00000441883 TIMELESSQ9UNS1 1208 aa38.04■■■■□ 3.68
MRPL28-204ENST00000441883 PEAK1Q9H792 1746 aa38.04■■■■□ 3.68
MRPL28-204ENST00000441883 OVOS2A0A0J9YW53 1432 aa38.04■■■■□ 3.68
MRPL28-204ENST00000441883 OVOS2Q6IE36 1432 aa38.04■■■■□ 3.68
MRPL28-204ENST00000441883 PSDA5PKW4 1024 aaPredicted RBP38.02■■■■□ 3.68
MRPL28-204ENST00000441883 LTN1O94822 1766 aa38.01■■■■□ 3.68
MRPL28-204ENST00000441883 CDCA7Q9BWT1 371 aaPredicted RBP38.01■■■■□ 3.68
MRPL28-204ENST00000441883 CLSPNQ9HAW4 1339 aa38.01■■■■□ 3.68
MRPL28-204ENST00000441883 C11orf95C9JLR9 678 aaPredicted RBP37.99■■■■□ 3.67
MRPL28-204ENST00000441883 OVOS2A0A0G2JMS6 1433 aa37.98■■■■□ 3.67
MRPL28-204ENST00000441883 TMF1P82094 1093 aa37.98■■■■□ 3.67
MRPL28-204ENST00000441883 PARD3Q8TEW0 1356 aa37.96■■■■□ 3.67
MRPL28-204ENST00000441883 MARCH10Q8NA82 808 aaPredicted RBP37.96■■■■□ 3.67
MRPL28-204ENST00000441883 CCDC7Q96M83 1385 aa37.95■■■■□ 3.67
MRPL28-204ENST00000441883 ERBB3P21860 1342 aa37.95■■■■□ 3.67
MRPL28-204ENST00000441883 SBF2Q86WG5 1849 aa37.95■■■■□ 3.67
MRPL28-204ENST00000441883 ANKRD36BQ8N2N9 1353 aa37.93■■■■□ 3.66
MRPL28-204ENST00000441883 R3HDM1Q15032 1099 aaKnown RBP37.92■■■■□ 3.66
MRPL28-204ENST00000441883 RREB1Q92766 1687 aa37.9■■■■□ 3.66
MRPL28-204ENST00000441883 ANKRD24Q8TF21 1146 aa37.89■■■■□ 3.66
MRPL28-204ENST00000441883 NLRP2Q9NX02 1062 aa37.89■■■■□ 3.66
MRPL28-204ENST00000441883 EXOC5O00471 708 aa37.88■■■■□ 3.65
MRPL28-204ENST00000441883 COG3Q96JB2 828 aa37.88■■■■□ 3.65
MRPL28-204ENST00000441883 BCL9O00512 1426 aa37.87■■■■□ 3.65
MRPL28-204ENST00000441883 PTF1AQ7RTS3 328 aa37.87■■■■□ 3.65
MRPL28-204ENST00000441883 IP6K1Q92551 441 aa37.87■■■■□ 3.65
MRPL28-204ENST00000441883 FBLN1P23142 703 aa37.85■■■■□ 3.65
MRPL28-204ENST00000441883 LRP5O75197 1615 aa37.85■■■■□ 3.65
MRPL28-204ENST00000441883 NUP188Q5SRE5 1749 aa37.84■■■■□ 3.65
MRPL28-204ENST00000441883 BCL11BQ9C0K0 894 aaPredicted RBP37.84■■■■□ 3.65
MRPL28-204ENST00000441883 FYB1O15117 783 aa37.82■■■■□ 3.64
MRPL28-204ENST00000441883 CDCA8Q53HL2 280 aa37.82■■■■□ 3.64
MRPL28-204ENST00000441883 PLSCR1O15162 318 aa37.81■■■■□ 3.64
MRPL28-204ENST00000441883 MAP3K19Q56UN5 1328 aa37.81■■■■□ 3.64
MRPL28-204ENST00000441883 TNS2Q63HR2 1409 aa37.8■■■■□ 3.64
MRPL28-204ENST00000441883 IL2RBP14784 551 aa37.78■■■■□ 3.64
MRPL28-204ENST00000441883 GGNBP2Q9H3C7 697 aa37.77■■■■□ 3.64
MRPL28-204ENST00000441883 HOXC9P31274 260 aa37.75■■■■□ 3.63
MRPL28-204ENST00000441883 LTV1Q96GA3 475 aaPredicted RBP37.75■■■■□ 3.63
MRPL28-204ENST00000441883 RGPD3A6NKT7 1758 aaPredicted RBP37.75■■■■□ 3.63
MRPL28-204ENST00000441883 RGPD4Q7Z3J3 1758 aa37.75■■■■□ 3.63
MRPL28-204ENST00000441883 NBPF14Q5TI25 921 aa37.73■■■■□ 3.63
MRPL28-204ENST00000441883 CARD14Q9BXL6 1004 aa37.73■■■■□ 3.63
MRPL28-204ENST00000441883 MYOM1P52179 1685 aa37.72■■■■□ 3.63
MRPL28-204ENST00000441883 AMPHP49418 695 aa37.71■■■■□ 3.63
MRPL28-204ENST00000441883 PROM2Q8N271 834 aa37.71■■■■□ 3.63
MRPL28-204ENST00000441883 FAM208AQ9UK61 1670 aaKnown RBP37.69■■■■□ 3.62
MRPL28-204ENST00000441883 KCNQ2O43526 872 aa37.69■■■■□ 3.62
MRPL28-204ENST00000441883 RRS1Q15050 365 aaKnown RBP37.69■■■■□ 3.62
MRPL28-204ENST00000441883 CCER1Q8TC90 406 aaPredicted RBP37.68■■■■□ 3.62
MRPL28-204ENST00000441883 KIF20BQ96Q89 1820 aa37.66■■■■□ 3.62
MRPL28-204ENST00000441883 RGPD2P0DJD1 1756 aa37.65■■■■□ 3.62
MRPL28-204ENST00000441883 RTL1A6NKG5 1358 aa37.63■■■■□ 3.61
MRPL28-204ENST00000441883 ACSBG1Q96GR2 724 aa37.62■■■■□ 3.61
MRPL28-204ENST00000441883 NHSQ6T4R5 1651 aa37.62■■■■□ 3.61
MRPL28-204ENST00000441883 NSD3Q9BZ95 1437 aa37.61■■■■□ 3.61
MRPL28-204ENST00000441883 ANO8Q9HCE9 1232 aaPredicted RBP37.6■■■■□ 3.61
MRPL28-204ENST00000441883 TXNRD1Q16881 649 aa37.58■■■■□ 3.61
MRPL28-204ENST00000441883 KAT6BQ8WYB5 2073 aa37.57■■■■□ 3.6
MRPL28-204ENST00000441883 NBPF6Q5VWK0 638 aa37.56■■■■□ 3.6
MRPL28-204ENST00000441883 NBPF4Q96M43 638 aa37.56■■■■□ 3.6
MRPL28-204ENST00000441883 EIF4G2P78344 907 aaKnown RBP eCLIP37.55■■■■□ 3.6
MRPL28-204ENST00000441883 HSPA5P11021 654 aaKnown RBP37.54■■■■□ 3.6
MRPL28-204ENST00000441883 HSP90AB2PQ58FF8 381 aa37.54■■■■□ 3.6
MRPL28-204ENST00000441883 DDX54Q8TDD1 881 aaKnown RBP37.54■■■■□ 3.6
MRPL28-204ENST00000441883 INSRP06213 1382 aa37.52■■■■□ 3.6
MRPL28-204ENST00000441883 KIF24Q5T7B8 1368 aa37.51■■■■□ 3.59
MRPL28-204ENST00000441883 MEGF6O75095 1541 aa37.51■■■■□ 3.59
MRPL28-204ENST00000441883 BTAF1O14981 1849 aa37.5■■■■□ 3.59
MRPL28-204ENST00000441883 POLR3GLQ9BT43 218 aa37.49■■■■□ 3.59
MRPL28-204ENST00000441883 FLT4P35916 1363 aa37.49■■■■□ 3.59
MRPL28-204ENST00000441883 USHBP1Q8N6Y0 703 aa37.48■■■■□ 3.59
MRPL28-204ENST00000441883 ZCRB1Q8TBF4 217 aaKnown RBP37.48■■■■□ 3.59
MRPL28-204ENST00000441883 SHANK3Q9BYB0 1731 aa37.47■■■■□ 3.59
MRPL28-204ENST00000441883 EMILIN1Q9Y6C2 1016 aa37.47■■■■□ 3.59
MRPL28-204ENST00000441883 PDGFDQ9GZP0 370 aaPredicted RBP37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms