RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 CCDC125Q86Z20 511 aa17.88■□□□□ 0.45
ZNF3-209ENST00000441298 CRB1P82279 1406 aa17.88■□□□□ 0.45
ZNF3-209ENST00000441298 USP54Q70EL1 1684 aa17.87■□□□□ 0.45
ZNF3-209ENST00000441298 LTN1O94822 1766 aa17.87■□□□□ 0.45
ZNF3-209ENST00000441298 ARHGEF25Q86VW2 580 aa17.87■□□□□ 0.45
ZNF3-209ENST00000441298 POLR3GLQ9BT43 218 aa17.87■□□□□ 0.45
ZNF3-209ENST00000441298 USP31Q70CQ4 1352 aa17.87■□□□□ 0.45
ZNF3-209ENST00000441298 DEFB132Q7Z7B7 95 aa17.86■□□□□ 0.45
ZNF3-209ENST00000441298 AXIN2Q9Y2T1 843 aa17.86■□□□□ 0.45
ZNF3-209ENST00000441298 ANKRD36BQ8N2N9 1353 aa17.86■□□□□ 0.45
ZNF3-209ENST00000441298 BARGINQ6ZT62 677 aa17.85■□□□□ 0.45
ZNF3-209ENST00000441298 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
ZNF3-209ENST00000441298 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
ZNF3-209ENST00000441298 PDE3BQ13370 1112 aa17.84■□□□□ 0.45
ZNF3-209ENST00000441298 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
ZNF3-209ENST00000441298 RGPD1P0DJD0 1748 aa17.84■□□□□ 0.45
ZNF3-209ENST00000441298 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.44
ZNF3-209ENST00000441298 THRAP3Q9Y2W1 955 aaKnown RBP17.83■□□□□ 0.44
ZNF3-209ENST00000441298 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
ZNF3-209ENST00000441298 COG3Q96JB2 828 aa17.82■□□□□ 0.44
ZNF3-209ENST00000441298 MYOM1P52179 1685 aa17.82■□□□□ 0.44
ZNF3-209ENST00000441298 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
ZNF3-209ENST00000441298 LRRC37A3O60309 1634 aa17.81■□□□□ 0.44
ZNF3-209ENST00000441298 ABCC6O95255 1503 aa17.81■□□□□ 0.44
ZNF3-209ENST00000441298 BAG6P46379 1132 aa17.8■□□□□ 0.44
ZNF3-209ENST00000441298 KIF20BQ96Q89 1820 aa17.79■□□□□ 0.44
ZNF3-209ENST00000441298 TNS1Q9HBL0 1735 aaKnown RBP17.79■□□□□ 0.44
ZNF3-209ENST00000441298 TRIM37O94972 964 aa17.78■□□□□ 0.44
ZNF3-209ENST00000441298 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
ZNF3-209ENST00000441298 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
ZNF3-209ENST00000441298 FAM196AQ6ZSG2 479 aa17.78■□□□□ 0.44
ZNF3-209ENST00000441298 GGNBP2Q9H3C7 697 aa17.78■□□□□ 0.44
ZNF3-209ENST00000441298 NLRP2Q9NX02 1062 aa17.78■□□□□ 0.44
ZNF3-209ENST00000441298 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
ZNF3-209ENST00000441298 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
ZNF3-209ENST00000441298 ERBB3P21860 1342 aa17.76■□□□□ 0.43
ZNF3-209ENST00000441298 FBLN1P23142 703 aa17.76■□□□□ 0.43
ZNF3-209ENST00000441298 EN1Q05925 392 aaPredicted RBP17.76■□□□□ 0.43
ZNF3-209ENST00000441298 DDB1Q16531 1140 aa17.76■□□□□ 0.43
ZNF3-209ENST00000441298 ANKRD24Q8TF21 1146 aa17.76■□□□□ 0.43
ZNF3-209ENST00000441298 CARD10Q9BWT7 1032 aa17.76■□□□□ 0.43
ZNF3-209ENST00000441298 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
ZNF3-209ENST00000441298 OVOS2A0A0G2JMS6 1433 aa17.74■□□□□ 0.43
ZNF3-209ENST00000441298 AMPHP49418 695 aa17.74■□□□□ 0.43
ZNF3-209ENST00000441298 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
ZNF3-209ENST00000441298 FYB1O15117 783 aa17.73■□□□□ 0.43
ZNF3-209ENST00000441298 APBA3O96018 575 aa17.72■□□□□ 0.43
ZNF3-209ENST00000441298 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
ZNF3-209ENST00000441298 DISP2A7MBM2 1401 aa17.72■□□□□ 0.43
ZNF3-209ENST00000441298 IP6K1Q92551 441 aa17.71■□□□□ 0.43
ZNF3-209ENST00000441298 CDCA7Q9BWT1 371 aaPredicted RBP17.71■□□□□ 0.43
ZNF3-209ENST00000441298 CARD14Q9BXL6 1004 aa17.71■□□□□ 0.43
ZNF3-209ENST00000441298 PEAK1Q9H792 1746 aa17.7■□□□□ 0.42
ZNF3-209ENST00000441298 HOXC9P31274 260 aa17.7■□□□□ 0.42
ZNF3-209ENST00000441298 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
ZNF3-209ENST00000441298 TNS2Q63HR2 1409 aa17.7■□□□□ 0.42
ZNF3-209ENST00000441298 FAM208AQ9UK61 1670 aaKnown RBP17.7■□□□□ 0.42
ZNF3-209ENST00000441298 PSDA5PKW4 1024 aaPredicted RBP17.68■□□□□ 0.42
ZNF3-209ENST00000441298 EXOC5O00471 708 aa17.68■□□□□ 0.42
ZNF3-209ENST00000441298 IL2RBP14784 551 aa17.68■□□□□ 0.42
ZNF3-209ENST00000441298 RTL1A6NKG5 1358 aa17.67■□□□□ 0.42
ZNF3-209ENST00000441298 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
ZNF3-209ENST00000441298 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
ZNF3-209ENST00000441298 SBF2Q86WG5 1849 aa17.67■□□□□ 0.42
ZNF3-209ENST00000441298 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
ZNF3-209ENST00000441298 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
ZNF3-209ENST00000441298 C11orf95C9JLR9 678 aaPredicted RBP17.64■□□□□ 0.41
ZNF3-209ENST00000441298 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
ZNF3-209ENST00000441298 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
ZNF3-209ENST00000441298 CAMKK2Q96RR4 588 aa17.63■□□□□ 0.41
ZNF3-209ENST00000441298 RREB1Q92766 1687 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 NUP188Q5SRE5 1749 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
ZNF3-209ENST00000441298 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
ZNF3-209ENST00000441298 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 PANK3Q9H999 370 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 FLT4P35916 1363 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 PARD3Q8TEW0 1356 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 KAT6BQ8WYB5 2073 aa17.62■□□□□ 0.41
ZNF3-209ENST00000441298 ANKRD26Q9UPS8 1709 aa17.61■□□□□ 0.41
ZNF3-209ENST00000441298 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
ZNF3-209ENST00000441298 DDX54Q8TDD1 881 aaKnown RBP17.6■□□□□ 0.41
ZNF3-209ENST00000441298 MEGF6O75095 1541 aa17.59■□□□□ 0.41
ZNF3-209ENST00000441298 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
ZNF3-209ENST00000441298 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
ZNF3-209ENST00000441298 INSRP06213 1382 aa17.58■□□□□ 0.4
ZNF3-209ENST00000441298 MAP2P11137 1827 aaKnown RBP17.58■□□□□ 0.4
ZNF3-209ENST00000441298 BCL9O00512 1426 aa17.57■□□□□ 0.4
ZNF3-209ENST00000441298 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
ZNF3-209ENST00000441298 KCNQ2O43526 872 aa17.57■□□□□ 0.4
ZNF3-209ENST00000441298 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
ZNF3-209ENST00000441298 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
ZNF3-209ENST00000441298 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
ZNF3-209ENST00000441298 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
ZNF3-209ENST00000441298 RAPGEF4Q8WZA2 1011 aa17.56■□□□□ 0.4
ZNF3-209ENST00000441298 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
ZNF3-209ENST00000441298 NBPF14Q5TI25 921 aa17.55■□□□□ 0.4
ZNF3-209ENST00000441298 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms