RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 COL8A1P27658 744 aa6.9□□□□□ -1.3
LINC01549-201ENST00000440664 SYMPKQ92797 1274 aaKnown RBP6.9□□□□□ -1.3
LINC01549-201ENST00000440664 MBIPQ9NS73 344 aa6.9□□□□□ -1.3
LINC01549-201ENST00000440664 C1QTNF9BB2RNN3 333 aa6.89□□□□□ -1.31
LINC01549-201ENST00000440664 SNRPNP63162 240 aaKnown RBP6.89□□□□□ -1.31
LINC01549-201ENST00000440664 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
LINC01549-201ENST00000440664 FOXD4L6Q3SYB3 417 aaPredicted RBP6.89□□□□□ -1.31
LINC01549-201ENST00000440664 FOXD4L3Q6VB84 417 aaPredicted RBP6.89□□□□□ -1.31
LINC01549-201ENST00000440664 MKL2Q9ULH7 1088 aa6.89□□□□□ -1.31
LINC01549-201ENST00000440664 MINK1Q8N4C8 1332 aaPredicted RBP6.89□□□□□ -1.31
LINC01549-201ENST00000440664 DOC2BQ14184 412 aa6.88□□□□□ -1.31
LINC01549-201ENST00000440664 RETREG3Q86VR2 466 aa6.87□□□□□ -1.31
LINC01549-201ENST00000440664 ACDQ96AP0 544 aa6.87□□□□□ -1.31
LINC01549-201ENST00000440664 EVA1BQ9NVM1 165 aa6.86□□□□□ -1.31
LINC01549-201ENST00000440664 YBX3P16989 372 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC01549-201ENST00000440664 GRM5P41594 1212 aa6.85□□□□□ -1.31
LINC01549-201ENST00000440664 USP46P62068 366 aa6.85□□□□□ -1.31
LINC01549-201ENST00000440664 GUCA2AQ02747 115 aa6.85□□□□□ -1.31
LINC01549-201ENST00000440664 CCDC102AQ96A19 550 aa6.85□□□□□ -1.31
LINC01549-201ENST00000440664 CD46P15529 392 aa6.84□□□□□ -1.31
LINC01549-201ENST00000440664 KCNH2Q12809 1159 aa6.84□□□□□ -1.31
LINC01549-201ENST00000440664 PTPRNQ16849 979 aa6.84□□□□□ -1.31
LINC01549-201ENST00000440664 CD163Q86VB7 1156 aa6.84□□□□□ -1.31
LINC01549-201ENST00000440664 SPINT1O43278 529 aa6.83□□□□□ -1.32
LINC01549-201ENST00000440664 HOXA2O43364 376 aa6.83□□□□□ -1.32
LINC01549-201ENST00000440664 ZMYND10O75800 440 aa6.83□□□□□ -1.32
LINC01549-201ENST00000440664 BARGINQ6ZT62 677 aa6.83□□□□□ -1.32
LINC01549-201ENST00000440664 RRAGCQ9HB90 399 aa6.83□□□□□ -1.32
LINC01549-201ENST00000440664 LRRC4BQ9NT99 713 aa6.83□□□□□ -1.32
LINC01549-201ENST00000440664 SENP3-EIF4A1A0A087X0R7 540 aa6.82□□□□□ -1.32
LINC01549-201ENST00000440664 GPR25O00155 361 aa6.82□□□□□ -1.32
LINC01549-201ENST00000440664 FSHRP23945 695 aa6.82□□□□□ -1.32
LINC01549-201ENST00000440664 OIP5O43482 229 aa6.81□□□□□ -1.32
LINC01549-201ENST00000440664 CHRNA4P43681 627 aa6.81□□□□□ -1.32
LINC01549-201ENST00000440664 FOXR1Q6PIV2 292 aa6.81□□□□□ -1.32
LINC01549-201ENST00000440664 ZC3H15Q8WU90 426 aaKnown RBP6.81□□□□□ -1.32
LINC01549-201ENST00000440664 FOXJ1Q92949 421 aa6.81□□□□□ -1.32
LINC01549-201ENST00000440664 CUEDC1Q9NWM3 386 aaPredicted RBP6.81□□□□□ -1.32
LINC01549-201ENST00000440664 EMILIN1Q9Y6C2 1016 aa6.81□□□□□ -1.32
LINC01549-201ENST00000440664 MDM2Q00987 491 aaPredicted RBP6.8□□□□□ -1.32
LINC01549-201ENST00000440664 AGERQ15109 404 aa6.8□□□□□ -1.32
LINC01549-201ENST00000440664 GPCPD1Q9NPB8 672 aa6.8□□□□□ -1.32
LINC01549-201ENST00000440664 ARID1BQ8NFD5 2236 aaPredicted RBP6.79□□□□□ -1.32
LINC01549-201ENST00000440664 CLCN1P35523 988 aa6.79□□□□□ -1.32
LINC01549-201ENST00000440664 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
LINC01549-201ENST00000440664 LAMC2Q13753 1193 aa6.78□□□□□ -1.32
LINC01549-201ENST00000440664 FAM217BQ9NTX9 383 aaPredicted RBP6.78□□□□□ -1.32
LINC01549-201ENST00000440664 C6orf229H3BNL8 230 aa6.77□□□□□ -1.33
LINC01549-201ENST00000440664 TXKP42681 527 aa6.77□□□□□ -1.33
LINC01549-201ENST00000440664 SUV39H2Q9H5I1 410 aa6.77□□□□□ -1.33
LINC01549-201ENST00000440664 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
LINC01549-201ENST00000440664 CBLBQ13191 982 aa6.76□□□□□ -1.33
LINC01549-201ENST00000440664 AMHR2Q16671 573 aa6.76□□□□□ -1.33
LINC01549-201ENST00000440664 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
LINC01549-201ENST00000440664 NSFL1CQ9UNZ2 370 aaKnown RBP6.76□□□□□ -1.33
LINC01549-201ENST00000440664 CTHP32929 405 aa6.75□□□□□ -1.33
LINC01549-201ENST00000440664 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
LINC01549-201ENST00000440664 KRI1Q8N9T8 703 aaKnown RBP6.75□□□□□ -1.33
LINC01549-201ENST00000440664 INSM2Q96T92 566 aaPredicted RBP6.75□□□□□ -1.33
LINC01549-201ENST00000440664 PAX4O43316 350 aa6.74□□□□□ -1.33
LINC01549-201ENST00000440664 MCTP1Q6DN14 999 aa6.74□□□□□ -1.33
LINC01549-201ENST00000440664 SHISA8B8ZZ34 492 aa6.73□□□□□ -1.33
LINC01549-201ENST00000440664 MX2P20592 715 aa6.73□□□□□ -1.33
LINC01549-201ENST00000440664 GATA4P43694 442 aa6.73□□□□□ -1.33
LINC01549-201ENST00000440664 FZD5Q13467 585 aa6.73□□□□□ -1.33
LINC01549-201ENST00000440664 RSPO4Q2I0M5 234 aaPredicted RBP6.73□□□□□ -1.33
LINC01549-201ENST00000440664 RNF217Q8TC41 542 aa6.73□□□□□ -1.33
LINC01549-201ENST00000440664 OXCT2Q9BYC2 517 aaPredicted RBP6.73□□□□□ -1.33
LINC01549-201ENST00000440664 PIK3R2O00459 728 aa6.72□□□□□ -1.33
LINC01549-201ENST00000440664 Q6ZVU0 165 aa6.72□□□□□ -1.33
LINC01549-201ENST00000440664 VASH1Q7L8A9 365 aaPredicted RBP6.72□□□□□ -1.33
LINC01549-201ENST00000440664 TRERF1Q96PN7 1200 aa6.72□□□□□ -1.33
LINC01549-201ENST00000440664 SSTR3P32745 418 aaPredicted RBP6.71□□□□□ -1.34
LINC01549-201ENST00000440664 RELBQ01201 579 aa6.71□□□□□ -1.34
LINC01549-201ENST00000440664 LRP8Q14114 963 aa6.71□□□□□ -1.34
LINC01549-201ENST00000440664 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
LINC01549-201ENST00000440664 BPHLQ86WA6 291 aaPredicted RBP6.71□□□□□ -1.34
LINC01549-201ENST00000440664 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.34
LINC01549-201ENST00000440664 GMCL1Q96IK5 515 aa6.71□□□□□ -1.34
LINC01549-201ENST00000440664 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.34
LINC01549-201ENST00000440664 TRIM66O15016 1216 aa6.7□□□□□ -1.34
LINC01549-201ENST00000440664 AMPD1P23109 780 aa6.7□□□□□ -1.34
LINC01549-201ENST00000440664 GTPBP3Q969Y2 492 aaKnown RBP6.7□□□□□ -1.34
LINC01549-201ENST00000440664 AGBL1Q96MI9 1066 aa6.7□□□□□ -1.34
LINC01549-201ENST00000440664 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
LINC01549-201ENST00000440664 GNB5O14775 395 aa6.69□□□□□ -1.34
LINC01549-201ENST00000440664 PRPF38BQ5VTL8 546 aaKnown RBP6.69□□□□□ -1.34
LINC01549-201ENST00000440664 GIGYF2Q6Y7W6 1299 aaKnown RBP6.69□□□□□ -1.34
LINC01549-201ENST00000440664 RIPOR1Q6ZS17 1223 aa6.69□□□□□ -1.34
LINC01549-201ENST00000440664 AK7Q96M32 723 aa6.69□□□□□ -1.34
LINC01549-201ENST00000440664 TTLL12Q14166 644 aaPredicted RBP6.68□□□□□ -1.34
LINC01549-201ENST00000440664 PPP1R26Q5T8A7 1209 aaPredicted RBP6.68□□□□□ -1.34
LINC01549-201ENST00000440664 LINC00114Q6XXX2 140 aa6.68□□□□□ -1.34
LINC01549-201ENST00000440664 NUTM1Q86Y26 1132 aa6.68□□□□□ -1.34
LINC01549-201ENST00000440664 PARP9Q8IXQ6 854 aa6.68□□□□□ -1.34
LINC01549-201ENST00000440664 SPIRE2Q8WWL2 714 aa6.68□□□□□ -1.34
LINC01549-201ENST00000440664 NOP53Q9NZM5 478 aaKnown RBP6.68□□□□□ -1.34
LINC01549-201ENST00000440664 DYRK3O43781 588 aa6.67□□□□□ -1.34
LINC01549-201ENST00000440664 FDX1P10109 184 aa6.67□□□□□ -1.34
LINC01549-201ENST00000440664 NKAPLQ5M9Q1 402 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms